RNA–Protein interactions for RNA: ENST00000558791.5

CTDSPL2-203, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-203ENST00000558791 PLCH2O75038 1416 aa17.59■□□□□ 0.41
CTDSPL2-203ENST00000558791 HECW1Q76N89 1606 aa17.57■□□□□ 0.4
CTDSPL2-203ENST00000558791 CDK11AQ9UQ88 783 aaPredicted RBP17.56■□□□□ 0.4
CTDSPL2-203ENST00000558791 FMN1Q68DA7 1419 aa17.55■□□□□ 0.4
CTDSPL2-203ENST00000558791 MSH5O43196 834 aa17.55■□□□□ 0.4
CTDSPL2-203ENST00000558791 FER1L4A9Z1Z3 1794 aa17.55■□□□□ 0.4
CTDSPL2-203ENST00000558791 SCAPERQ9BY12 1400 aa17.55■□□□□ 0.4
CTDSPL2-203ENST00000558791 YEATS2Q9ULM3 1422 aa17.55■□□□□ 0.4
CTDSPL2-203ENST00000558791 MYO5CQ9NQX4 1742 aa17.54■□□□□ 0.4
CTDSPL2-203ENST00000558791 CDK13Q14004 1512 aaKnown RBP17.53■□□□□ 0.4
CTDSPL2-203ENST00000558791 EFCAB2Q5VUJ9 269 aa17.53■□□□□ 0.4
CTDSPL2-203ENST00000558791 ATP10AO60312 1499 aa17.52■□□□□ 0.4
CTDSPL2-203ENST00000558791 SIGLEC1Q9BZZ2 1709 aa17.52■□□□□ 0.39
CTDSPL2-203ENST00000558791 SETD1BQ9UPS6 1966 aaKnown RBP17.5■□□□□ 0.39
CTDSPL2-203ENST00000558791 C9orf84Q5VXU9 1444 aa17.5■□□□□ 0.39
CTDSPL2-203ENST00000558791 ARHGEF12Q9NZN5 1544 aa17.49■□□□□ 0.39
CTDSPL2-203ENST00000558791 HSPA2P54652 639 aa17.48■□□□□ 0.39
CTDSPL2-203ENST00000558791 ZNF518AQ6AHZ1 1483 aa17.48■□□□□ 0.39
CTDSPL2-203ENST00000558791 KIF14Q15058 1648 aa17.47■□□□□ 0.39
CTDSPL2-203ENST00000558791 PREX1Q8TCU6 1659 aa17.47■□□□□ 0.39
CTDSPL2-203ENST00000558791 UBTFP17480 764 aaKnown RBP17.46■□□□□ 0.39
CTDSPL2-203ENST00000558791 MLECQ14165 292 aa17.46■□□□□ 0.39
CTDSPL2-203ENST00000558791 CLIP1P30622 1438 aa17.46■□□□□ 0.39
CTDSPL2-203ENST00000558791 TROQ12816 1431 aaPredicted RBP17.45■□□□□ 0.38
CTDSPL2-203ENST00000558791 CERKQ8TCT0 537 aa17.44■□□□□ 0.38
CTDSPL2-203ENST00000558791 ATP1B4Q9UN42 357 aaPredicted RBP17.44■□□□□ 0.38
CTDSPL2-203ENST00000558791 KDM5CP41229 1560 aa17.44■□□□□ 0.38
CTDSPL2-203ENST00000558791 ARHGAP35Q9NRY4 1499 aa17.44■□□□□ 0.38
CTDSPL2-203ENST00000558791 DMRT2Q9Y5R5 561 aa17.43■□□□□ 0.38
CTDSPL2-203ENST00000558791 REREQ9P2R6 1566 aa17.42■□□□□ 0.38
CTDSPL2-203ENST00000558791 ARHGAP5Q13017 1502 aa17.42■□□□□ 0.38
CTDSPL2-203ENST00000558791 MLH3Q9UHC1 1453 aa17.38■□□□□ 0.37
CTDSPL2-203ENST00000558791 AFAP1Q8N556 730 aa17.37■□□□□ 0.37
CTDSPL2-203ENST00000558791 CDC42BPBQ9Y5S2 1711 aa17.37■□□□□ 0.37
CTDSPL2-203ENST00000558791 UHRF1BP1Q6BDS2 1440 aa17.37■□□□□ 0.37
CTDSPL2-203ENST00000558791 DIP2CQ9Y2E4 1556 aa17.36■□□□□ 0.37
CTDSPL2-203ENST00000558791 MYT1LQ9UL68 1186 aa17.35■□□□□ 0.37
CTDSPL2-203ENST00000558791 CCDC18Q5T9S5 1454 aa17.35■□□□□ 0.37
CTDSPL2-203ENST00000558791 AGLP35573 1532 aa17.35■□□□□ 0.37
CTDSPL2-203ENST00000558791 LRRIQ1Q96JM4 1722 aa17.35■□□□□ 0.37
CTDSPL2-203ENST00000558791 PREX2Q70Z35 1606 aa17.34■□□□□ 0.37
CTDSPL2-203ENST00000558791 STRCQ7RTU9 1775 aa17.34■□□□□ 0.37
CTDSPL2-203ENST00000558791 CEBPAP49715 358 aaPredicted RBP17.33■□□□□ 0.36
CTDSPL2-203ENST00000558791 ESF1Q9H501 851 aaKnown RBP17.32■□□□□ 0.36
CTDSPL2-203ENST00000558791 C3P01024 1663 aa17.31■□□□□ 0.36
CTDSPL2-203ENST00000558791 ABCA6Q8N139 1617 aa17.31■□□□□ 0.36
CTDSPL2-203ENST00000558791 ABCC1P33527 1531 aa17.31■□□□□ 0.36
CTDSPL2-203ENST00000558791 PTPRTO14522 1441 aa17.3■□□□□ 0.36
CTDSPL2-203ENST00000558791 CASKIN1Q8WXD9 1431 aa17.3■□□□□ 0.36
CTDSPL2-203ENST00000558791 CNTLNQ9NXG0 1405 aa17.3■□□□□ 0.36
CTDSPL2-203ENST00000558791 ITSN2Q9NZM3 1697 aa17.3■□□□□ 0.36
CTDSPL2-203ENST00000558791 TRAPPC8Q9Y2L5 1435 aa17.29■□□□□ 0.36
CTDSPL2-203ENST00000558791 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
CTDSPL2-203ENST00000558791 KIDINS220Q9ULH0 1771 aa17.27■□□□□ 0.35
CTDSPL2-203ENST00000558791 CDC42BPAQ5VT25 1732 aa17.27■□□□□ 0.35
CTDSPL2-203ENST00000558791 MROH2AA6NES4 1674 aa17.24■□□□□ 0.35
CTDSPL2-203ENST00000558791 FYCO1Q9BQS8 1478 aa17.24■□□□□ 0.35
CTDSPL2-203ENST00000558791 IQSEC2Q5JU85 1478 aa17.23■□□□□ 0.35
CTDSPL2-203ENST00000558791 NPATQ14207 1427 aa17.22■□□□□ 0.35
CTDSPL2-203ENST00000558791 SAMD9LQ8IVG5 1584 aa17.2■□□□□ 0.34
CTDSPL2-203ENST00000558791 PLEKHH2Q8IVE3 1493 aa17.19■□□□□ 0.34
CTDSPL2-203ENST00000558791 NCOA1Q15788 1441 aa17.19■□□□□ 0.34
CTDSPL2-203ENST00000558791 KIAA1107Q9UPP5 1409 aa17.18■□□□□ 0.34
CTDSPL2-203ENST00000558791 SPAG9O60271 1321 aaKnown RBP17.18■□□□□ 0.34
CTDSPL2-203ENST00000558791 GPATCH8Q9UKJ3 1502 aaKnown RBP17.16■□□□□ 0.34
CTDSPL2-203ENST00000558791 LTBP4Q8N2S1 1624 aa17.16■□□□□ 0.34
CTDSPL2-203ENST00000558791 ZMYM3Q14202 1370 aa17.15■□□□□ 0.34
CTDSPL2-203ENST00000558791 SYCP2Q9BX26 1530 aa17.15■□□□□ 0.34
CTDSPL2-203ENST00000558791 DISP3Q9P2K9 1392 aa17.15■□□□□ 0.34
CTDSPL2-203ENST00000558791 SUPT6HQ7KZ85 1726 aaKnown RBP17.14■□□□□ 0.33
CTDSPL2-203ENST00000558791 ZNF777Q9ULD5 760 aaPredicted RBP17.14■□□□□ 0.33
CTDSPL2-203ENST00000558791 ATP7AQ04656 1500 aa17.14■□□□□ 0.33
CTDSPL2-203ENST00000558791 CAMSAP1Q5T5Y3 1602 aa17.13■□□□□ 0.33
CTDSPL2-203ENST00000558791 PLXNC1O60486 1568 aa17.12■□□□□ 0.33
CTDSPL2-203ENST00000558791 CFDP1Q9UEE9 299 aaPredicted RBP17.12■□□□□ 0.33
CTDSPL2-203ENST00000558791 A2MP01023 1474 aa17.12■□□□□ 0.33
CTDSPL2-203ENST00000558791 INO80Q9ULG1 1556 aaPredicted RBP17.11■□□□□ 0.33
CTDSPL2-203ENST00000558791 ZNF142P52746 1687 aaPredicted RBP17.11■□□□□ 0.33
CTDSPL2-203ENST00000558791 HNRNPMP52272 730 aaKnown RBP eCLIP17.11■□□□□ 0.331e-7■■■■■ 28.3
CTDSPL2-203ENST00000558791 PKD2Q13563 968 aa17.11■□□□□ 0.33
CTDSPL2-203ENST00000558791 CCNB3Q8WWL7 1395 aa17.11■□□□□ 0.33
CTDSPL2-203ENST00000558791 PLA2R1Q13018 1463 aa17.11■□□□□ 0.33
CTDSPL2-203ENST00000558791 CLTCQ00610 1675 aaKnown RBP17.1■□□□□ 0.33
CTDSPL2-203ENST00000558791 ADGBQ8N7X0 1667 aa17.1■□□□□ 0.33
CTDSPL2-203ENST00000558791 SOCS7O14512 581 aa17.09■□□□□ 0.33
CTDSPL2-203ENST00000558791 MYO3AQ8NEV4 1616 aa17.07■□□□□ 0.32
CTDSPL2-203ENST00000558791 MTUS2Q5JR59 1369 aa17.07■□□□□ 0.32
CTDSPL2-203ENST00000558791 SPATA31D1Q6ZQQ2 1576 aa17.06■□□□□ 0.32
CTDSPL2-203ENST00000558791 CEP170BQ9Y4F5 1589 aaPredicted RBP17.06■□□□□ 0.32
CTDSPL2-203ENST00000558791 PTPRKQ15262 1439 aa17.05■□□□□ 0.32
CTDSPL2-203ENST00000558791 TCOF1Q13428 1488 aaKnown RBP17.05■□□□□ 0.32
CTDSPL2-203ENST00000558791 RTEL1-TNFRSF6BF6WH68 1400 aa17.04■□□□□ 0.32
CTDSPL2-203ENST00000558791 GGT6Q6P531 493 aa17.04■□□□□ 0.32
CTDSPL2-203ENST00000558791 ILDR2Q71H61 639 aa17.04■□□□□ 0.32
CTDSPL2-203ENST00000558791 NCKAP5LQ9HCH0 1330 aa17.02■□□□□ 0.32
CTDSPL2-203ENST00000558791 FAM135AQ9P2D6 1515 aa17.02■□□□□ 0.32
CTDSPL2-203ENST00000558791 EHBP1L1Q8N3D4 1523 aa17.01■□□□□ 0.31
CTDSPL2-203ENST00000558791 TIAM1Q13009 1591 aa17■□□□□ 0.31
CTDSPL2-203ENST00000558791 A2ML1A8K2U0 1454 aa16.99■□□□□ 0.31
CTDSPL2-203ENST00000558791 MBD5Q9P267 1494 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms