RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 MPHOSPH9Q99550 1183 aa15.46■□□□□ 0.07
CSPG4P5-201ENST00000558731 UACAQ9BZF9 1416 aa15.46■□□□□ 0.06
CSPG4P5-201ENST00000558731 NPM1P06748 294 aaKnown RBP eCLIP15.45■□□□□ 0.06
CSPG4P5-201ENST00000558731 MYT1Q01538 1121 aa15.45■□□□□ 0.06
CSPG4P5-201ENST00000558731 MIER1Q8N108 512 aa15.45■□□□□ 0.06
CSPG4P5-201ENST00000558731 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.45■□□□□ 0.06
CSPG4P5-201ENST00000558731 HFM1A2PYH4 1435 aa15.45■□□□□ 0.06
CSPG4P5-201ENST00000558731 MIA2Q96PC5 1412 aa15.44■□□□□ 0.06
CSPG4P5-201ENST00000558731 DAPK1P53355 1430 aa15.42■□□□□ 0.06
CSPG4P5-201ENST00000558731 KIF14Q15058 1648 aa15.42■□□□□ 0.06
CSPG4P5-201ENST00000558731 MAPKBP1O60336 1514 aa15.4■□□□□ 0.06
CSPG4P5-201ENST00000558731 GPATCH8Q9UKJ3 1502 aaKnown RBP15.4■□□□□ 0.06
CSPG4P5-201ENST00000558731 ABCC5O15440 1437 aa15.4■□□□□ 0.06
CSPG4P5-201ENST00000558731 CENPBP07199 599 aaPredicted RBP15.4■□□□□ 0.06
CSPG4P5-201ENST00000558731 CNGB1Q14028 1251 aaPredicted RBP15.4■□□□□ 0.06
CSPG4P5-201ENST00000558731 POLR3GLQ9BT43 218 aa15.39■□□□□ 0.05
CSPG4P5-201ENST00000558731 DDX10Q13206 875 aaKnown RBP15.39■□□□□ 0.05
CSPG4P5-201ENST00000558731 GTF3C3Q9Y5Q9 886 aa15.39■□□□□ 0.05
CSPG4P5-201ENST00000558731 CAMSAP2Q08AD1 1489 aa15.39■□□□□ 0.05
CSPG4P5-201ENST00000558731 ACIN1Q9UKV3 1341 aaKnown RBP15.37■□□□□ 0.05
CSPG4P5-201ENST00000558731 ANKRD30AQ9BXX3 1397 aa15.36■□□□□ 0.05
CSPG4P5-201ENST00000558731 PKD2Q13563 968 aa15.36■□□□□ 0.05
CSPG4P5-201ENST00000558731 PPP1R15AO75807 674 aaPredicted RBP15.35■□□□□ 0.05
CSPG4P5-201ENST00000558731 CYB5RLQ6IPT4 315 aa15.35■□□□□ 0.05
CSPG4P5-201ENST00000558731 ABCA8O94911 1581 aa15.35■□□□□ 0.05
CSPG4P5-201ENST00000558731 KDM2AQ9Y2K7 1162 aa15.34■□□□□ 0.05
CSPG4P5-201ENST00000558731 NUP155O75694 1391 aa15.34■□□□□ 0.05
CSPG4P5-201ENST00000558731 TCOF1Q13428 1488 aaKnown RBP15.33■□□□□ 0.04
CSPG4P5-201ENST00000558731 EFCAB2Q5VUJ9 269 aa15.33■□□□□ 0.04
CSPG4P5-201ENST00000558731 ARHGAP5Q13017 1502 aa15.33■□□□□ 0.04
CSPG4P5-201ENST00000558731 L3MBTL2Q969R5 705 aa15.31■□□□□ 0.04
CSPG4P5-201ENST00000558731 AFAP1Q8N556 730 aa15.3■□□□□ 0.04
CSPG4P5-201ENST00000558731 RGL3Q3MIN7 710 aa15.29■□□□□ 0.04
CSPG4P5-201ENST00000558731 KDM6BO15054 1643 aa15.29■□□□□ 0.04
CSPG4P5-201ENST00000558731 KIF15Q9NS87 1388 aa15.29■□□□□ 0.04
CSPG4P5-201ENST00000558731 C9orf84Q5VXU9 1444 aa15.29■□□□□ 0.04
CSPG4P5-201ENST00000558731 ANKRD50Q9ULJ7 1429 aa15.29■□□□□ 0.04
CSPG4P5-201ENST00000558731 NCOA1Q15788 1441 aa15.27■□□□□ 0.04
CSPG4P5-201ENST00000558731 AKNAQ7Z591 1439 aa15.27■□□□□ 0.03
CSPG4P5-201ENST00000558731 ABCC2Q92887 1545 aa15.26■□□□□ 0.03
CSPG4P5-201ENST00000558731 TIMELESSQ9UNS1 1208 aa15.24■□□□□ 0.03
CSPG4P5-201ENST00000558731 ROCK1Q13464 1354 aa15.24■□□□□ 0.03
CSPG4P5-201ENST00000558731 ABCC10Q5T3U5 1492 aa15.23■□□□□ 0.03
CSPG4P5-201ENST00000558731 ITSN2Q9NZM3 1697 aa15.22■□□□□ 0.03
CSPG4P5-201ENST00000558731 SPAG9O60271 1321 aaKnown RBP15.22■□□□□ 0.03
CSPG4P5-201ENST00000558731 DNMT1P26358 1616 aaKnown RBP15.22■□□□□ 0.03
CSPG4P5-201ENST00000558731 CLASP1Q7Z460 1538 aa15.2■□□□□ 0.02
CSPG4P5-201ENST00000558731 SYCP2Q9BX26 1530 aa15.19■□□□□ 0.02
CSPG4P5-201ENST00000558731 RSPH4AQ5TD94 716 aa15.19■□□□□ 0.02
CSPG4P5-201ENST00000558731 HSPA5P11021 654 aaKnown RBP15.18■□□□□ 0.02
CSPG4P5-201ENST00000558731 EIF4G2P78344 907 aaKnown RBP eCLIP15.18■□□□□ 0.02
CSPG4P5-201ENST00000558731 DCAF11Q8TEB1 546 aa15.18■□□□□ 0.02
CSPG4P5-201ENST00000558731 CCDC141Q6ZP82 1450 aa15.18■□□□□ 0.02
CSPG4P5-201ENST00000558731 SENP3Q9H4L4 574 aaPredicted RBP15.17■□□□□ 0.02
CSPG4P5-201ENST00000558731 TTC37Q6PGP7 1564 aa15.17■□□□□ 0.02
CSPG4P5-201ENST00000558731 SHROOM2Q13796 1616 aa15.17■□□□□ 0.02
CSPG4P5-201ENST00000558731 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.17■□□□□ 0.02
CSPG4P5-201ENST00000558731 KIF3BO15066 747 aa15.17■□□□□ 0.02
CSPG4P5-201ENST00000558731 CDC42BPAQ5VT25 1732 aa15.16■□□□□ 0.02
CSPG4P5-201ENST00000558731 NBPF8Q3BBV2 869 aa15.15■□□□□ 0.02
CSPG4P5-201ENST00000558731 ANKRD30BQ9BXX2 1392 aa15.14■□□□□ 0.01
CSPG4P5-201ENST00000558731 ANP32CO43423 234 aa15.14■□□□□ 0.01
CSPG4P5-201ENST00000558731 CHGAP10645 457 aaKnown RBP15.14■□□□□ 0.01
CSPG4P5-201ENST00000558731 ASXL2Q76L83 1435 aa15.14■□□□□ 0.01
CSPG4P5-201ENST00000558731 GGT6Q6P531 493 aa15.13■□□□□ 0.01
CSPG4P5-201ENST00000558731 ZCCHC11Q5TAX3 1644 aaKnown RBP15.13■□□□□ 0.01
CSPG4P5-201ENST00000558731 GCC2Q8IWJ2 1684 aa15.12■□□□□ 0.01
CSPG4P5-201ENST00000558731 TRAPPC8Q9Y2L5 1435 aa15.12■□□□□ 0.01
CSPG4P5-201ENST00000558731 PLCH2O75038 1416 aa15.12■□□□□ 0.01
CSPG4P5-201ENST00000558731 SCAPERQ9BY12 1400 aa15.12■□□□□ 0.01
CSPG4P5-201ENST00000558731 SAMD9LQ8IVG5 1584 aa15.11■□□□□ 0.01
CSPG4P5-201ENST00000558731 ADCY10Q96PN6 1610 aa15.11■□□□□ 0.01
CSPG4P5-201ENST00000558731 MBD5Q9P267 1494 aa15.11■□□□□ 0.01
CSPG4P5-201ENST00000558731 DENND4BO75064 1496 aaPredicted RBP15.1■□□□□ 0.01
CSPG4P5-201ENST00000558731 WDR7Q9Y4E6 1490 aa15.1■□□□□ 0.01
CSPG4P5-201ENST00000558731 KDM5BQ9UGL1 1544 aa15.1■□□□□ 0.01
CSPG4P5-201ENST00000558731 PLEKHH2Q8IVE3 1493 aa15.1■□□□□ 0.01
CSPG4P5-201ENST00000558731 KIAA1107Q9UPP5 1409 aa15.1■□□□□ 0.01
CSPG4P5-201ENST00000558731 RAPGEF3O95398 923 aa15.09■□□□□ 0.01
CSPG4P5-201ENST00000558731 CARD11Q9BXL7 1154 aa15.09■□□□□ 0.01
CSPG4P5-201ENST00000558731 PZPP20742 1482 aa15.08■□□□□ 0.01
CSPG4P5-201ENST00000558731 FANCAO15360 1455 aa15.08■□□□□ 0
CSPG4P5-201ENST00000558731 FAM69CQ0P6D2 419 aa15.07■□□□□ 0
CSPG4P5-201ENST00000558731 CDC42BPBQ9Y5S2 1711 aa15.06■□□□□ 0
CSPG4P5-201ENST00000558731 ARHGEF12Q9NZN5 1544 aa15.06■□□□□ 0
CSPG4P5-201ENST00000558731 ADGRL2O95490 1459 aa15.05■□□□□ -0
CSPG4P5-201ENST00000558731 PREX2Q70Z35 1606 aa15.05■□□□□ -0
CSPG4P5-201ENST00000558731 UHRF1BP1LA0JNW5 1464 aa15.05■□□□□ -0
CSPG4P5-201ENST00000558731 ADGRL1O94910 1474 aa15.05■□□□□ -0
CSPG4P5-201ENST00000558731 CCDC144AA2RUR9 1427 aa15.04■□□□□ -0
CSPG4P5-201ENST00000558731 CD109Q6YHK3 1445 aa15.04■□□□□ -0
CSPG4P5-201ENST00000558731 MYO5CQ9NQX4 1742 aa15.03■□□□□ -0
CSPG4P5-201ENST00000558731 RPRD2Q5VT52 1461 aaKnown RBP15.03■□□□□ -0
CSPG4P5-201ENST00000558731 SHANK2Q9UPX8 1470 aa15.02□□□□□ -0.01
CSPG4P5-201ENST00000558731 ADGBQ8N7X0 1667 aa15.01□□□□□ -0.01
CSPG4P5-201ENST00000558731 WASHC2AQ641Q2 1341 aa15□□□□□ -0.01
CSPG4P5-201ENST00000558731 MLECQ14165 292 aa15□□□□□ -0.01
CSPG4P5-201ENST00000558731 C11orf95C9JLR9 678 aaPredicted RBP14.99□□□□□ -0.01
CSPG4P5-201ENST00000558731 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
CSPG4P5-201ENST00000558731 SENP3-EIF4A1A0A087X0R7 540 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms