RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 TIE1P35590 1138 aa11.27□□□□□ -0.61
MARK3-212ENST00000558223 NKX1-1Q15270 411 aaPredicted RBP11.26□□□□□ -0.61
MARK3-212ENST00000558223 POTEGQ6S5H5 508 aa11.26□□□□□ -0.61
MARK3-212ENST00000558223 IFNL1Q8IU54 200 aa11.26□□□□□ -0.61
MARK3-212ENST00000558223 EEA1Q15075 1411 aa11.26□□□□□ -0.61
MARK3-212ENST00000558223 EIF4G1Q04637 1599 aaKnown RBP11.25□□□□□ -0.61
MARK3-212ENST00000558223 MAMSTRQ6ZN01 415 aa11.25□□□□□ -0.61
MARK3-212ENST00000558223 TTLL13PA6NNM8 815 aa11.24□□□□□ -0.61
MARK3-212ENST00000558223 PYGBP11216 843 aa11.24□□□□□ -0.61
MARK3-212ENST00000558223 BAZ1BQ9UIG0 1483 aaKnown RBP11.23□□□□□ -0.61
MARK3-212ENST00000558223 LOC105371045A0A1W2PR82 267 aa11.22□□□□□ -0.61
MARK3-212ENST00000558223 NCAPD3P42695 1498 aa11.2□□□□□ -0.62
MARK3-212ENST00000558223 HRCP23327 699 aa11.2□□□□□ -0.62
MARK3-212ENST00000558223 GSE1Q14687 1217 aa11.18□□□□□ -0.62
MARK3-212ENST00000558223 LCE2DQ5TA82 110 aaPredicted RBP11.18□□□□□ -0.62
MARK3-212ENST00000558223 SCUBE2Q9NQ36 999 aa11.18□□□□□ -0.62
MARK3-212ENST00000558223 COLQQ9Y215 455 aaPredicted RBP11.18□□□□□ -0.62
MARK3-212ENST00000558223 ZMYND15Q9H091 742 aa11.17□□□□□ -0.62
MARK3-212ENST00000558223 HMGXB3Q12766 1538 aa11.17□□□□□ -0.62
MARK3-212ENST00000558223 FAM163AQ96GL9 167 aaPredicted RBP11.15□□□□□ -0.62
MARK3-212ENST00000558223 RSPH6AQ9H0K4 717 aa11.15□□□□□ -0.62
MARK3-212ENST00000558223 PCDHB8Q9UN66 801 aa11.15□□□□□ -0.62
MARK3-212ENST00000558223 TRIM35Q9UPQ4 493 aa11.15□□□□□ -0.62
MARK3-212ENST00000558223 RNF25Q96BH1 459 aaPredicted RBP11.14□□□□□ -0.63
MARK3-212ENST00000558223 TMEM106CQ9BVX2 250 aa11.14□□□□□ -0.63
MARK3-212ENST00000558223 RYDENQ9NUL5 291 aaKnown RBP11.14□□□□□ -0.63
MARK3-212ENST00000558223 WDR70Q9NW82 654 aa11.14□□□□□ -0.63
MARK3-212ENST00000558223 WRNQ14191 1432 aaPredicted RBP eCLIP11.12□□□□□ -0.63
MARK3-212ENST00000558223 SEC24BO95487 1268 aa11.12□□□□□ -0.63
MARK3-212ENST00000558223 STK25O00506 426 aa11.11□□□□□ -0.63
MARK3-212ENST00000558223 CHRM1P11229 460 aaPredicted RBP11.11□□□□□ -0.63
MARK3-212ENST00000558223 RIOK3O14730 519 aaKnown RBP11.1□□□□□ -0.63
MARK3-212ENST00000558223 ZC3H15Q8WU90 426 aaKnown RBP11.1□□□□□ -0.63
MARK3-212ENST00000558223 SLC24A3Q9HC58 644 aa11.1□□□□□ -0.63
MARK3-212ENST00000558223 FAM9AQ8IZU1 332 aaPredicted RBP11.09□□□□□ -0.63
MARK3-212ENST00000558223 KCNV2Q8TDN2 545 aa11.09□□□□□ -0.63
MARK3-212ENST00000558223 ARID3AQ99856 593 aa11.09□□□□□ -0.63
MARK3-212ENST00000558223 IER5LQ5T953 404 aa11.07□□□□□ -0.64
MARK3-212ENST00000558223 PCDH10Q9P2E7 1040 aa11.07□□□□□ -0.64
MARK3-212ENST00000558223 PCGF6Q9BYE7 350 aa11.06□□□□□ -0.64
MARK3-212ENST00000558223 TNIKQ9UKE5 1360 aa11.04□□□□□ -0.64
MARK3-212ENST00000558223 ABCC8Q09428 1581 aa11.04□□□□□ -0.64
MARK3-212ENST00000558223 ZNF467Q7Z7K2 595 aaPredicted RBP11.04□□□□□ -0.64
MARK3-212ENST00000558223 CCDC9Q9Y3X0 531 aaKnown RBP11.04□□□□□ -0.64
MARK3-212ENST00000558223 ZBTB7CA1YPR0 619 aa11.03□□□□□ -0.64
MARK3-212ENST00000558223 VGFO15240 615 aaPredicted RBP11.01□□□□□ -0.65
MARK3-212ENST00000558223 IRX5P78411 483 aaPredicted RBP11□□□□□ -0.65
MARK3-212ENST00000558223 ZEB1P37275 1124 aaPredicted RBP10.99□□□□□ -0.65
MARK3-212ENST00000558223 CFTRP13569 1480 aa10.99□□□□□ -0.65
MARK3-212ENST00000558223 GOLGA3Q08378 1498 aa10.98□□□□□ -0.65
MARK3-212ENST00000558223 CEP164Q9UPV0 1460 aa10.98□□□□□ -0.65
MARK3-212ENST00000558223 PSEN1P49768 467 aa10.97□□□□□ -0.65
MARK3-212ENST00000558223 STK24Q9Y6E0 443 aa10.97□□□□□ -0.65
MARK3-212ENST00000558223 SOGA1O94964 1423 aa10.96□□□□□ -0.65
MARK3-212ENST00000558223 PDIA4P13667 645 aaKnown RBP10.96□□□□□ -0.65
MARK3-212ENST00000558223 PLCG2P16885 1265 aa10.96□□□□□ -0.65
MARK3-212ENST00000558223 TOP2BQ02880 1626 aa10.95□□□□□ -0.66
MARK3-212ENST00000558223 SLAIN1Q8ND83 568 aa10.95□□□□□ -0.66
MARK3-212ENST00000558223 OCEL1Q9H607 264 aa10.94□□□□□ -0.66
MARK3-212ENST00000558223 BCL11BQ9C0K0 894 aaPredicted RBP10.93□□□□□ -0.66
MARK3-212ENST00000558223 CADPSQ9ULU8 1353 aa10.92□□□□□ -0.66
MARK3-212ENST00000558223 KIF21BO75037 1637 aa10.92□□□□□ -0.66
MARK3-212ENST00000558223 SYNJ1O43426 1573 aa10.92□□□□□ -0.66
MARK3-212ENST00000558223 PDAP1Q13442 181 aaKnown RBP10.92□□□□□ -0.66
MARK3-212ENST00000558223 BIVM-ERCC5R4GMW8 1640 aa10.91□□□□□ -0.66
MARK3-212ENST00000558223 CEP162Q5TB80 1403 aa10.91□□□□□ -0.66
MARK3-212ENST00000558223 ARHGEF1Q92888 912 aaKnown RBP10.9□□□□□ -0.66
MARK3-212ENST00000558223 ST18O60284 1047 aa10.89□□□□□ -0.67
MARK3-212ENST00000558223 ZMYND10O75800 440 aa10.89□□□□□ -0.67
MARK3-212ENST00000558223 MKRN3Q13064 507 aaKnown RBP10.88□□□□□ -0.67
MARK3-212ENST00000558223 KIF27Q86VH2 1401 aa10.87□□□□□ -0.67
MARK3-212ENST00000558223 GOLGA2Q08379 1002 aa10.87□□□□□ -0.67
MARK3-212ENST00000558223 CADPS2Q86UW7 1296 aa10.87□□□□□ -0.67
MARK3-212ENST00000558223 CDAN1Q8IWY9 1227 aa10.87□□□□□ -0.67
MARK3-212ENST00000558223 IL27Q8NEV9 243 aa10.87□□□□□ -0.67
MARK3-212ENST00000558223 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.86□□□□□ -0.67
MARK3-212ENST00000558223 PDCD7Q8N8D1 485 aaKnown RBP10.86□□□□□ -0.67
MARK3-212ENST00000558223 ZFP91Q96JP5 570 aaPredicted RBP10.86□□□□□ -0.67
MARK3-212ENST00000558223 C1orf115Q9H7X2 142 aa10.86□□□□□ -0.67
MARK3-212ENST00000558223 ERICH3Q5RHP9 1530 aa10.85□□□□□ -0.67
MARK3-212ENST00000558223 TESPA1A2RU30 521 aaPredicted RBP10.84□□□□□ -0.67
MARK3-212ENST00000558223 APBB1O00213 710 aa10.84□□□□□ -0.67
MARK3-212ENST00000558223 CABP2Q9NPB3 220 aa10.84□□□□□ -0.67
MARK3-212ENST00000558223 CC2D2AQ9P2K1 1620 aa10.84□□□□□ -0.67
MARK3-212ENST00000558223 RUSC2Q8N2Y8 1516 aa10.84□□□□□ -0.67
MARK3-212ENST00000558223 SEMA3EO15041 775 aa10.83□□□□□ -0.68
MARK3-212ENST00000558223 SMYD5Q6GMV2 418 aa10.83□□□□□ -0.68
MARK3-212ENST00000558223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.83□□□□□ -0.684e-7■■□□□ 13.8
MARK3-212ENST00000558223 PRDM2Q13029 1718 aa10.82□□□□□ -0.68
MARK3-212ENST00000558223 ARID3CA6NKF2 412 aa10.82□□□□□ -0.68
MARK3-212ENST00000558223 PRXQ9BXM0 1461 aa10.81□□□□□ -0.68
MARK3-212ENST00000558223 ILDR1Q86SU0 546 aaPredicted RBP10.81□□□□□ -0.68
MARK3-212ENST00000558223 GPBP1L1Q9HC44 474 aaPredicted RBP10.81□□□□□ -0.68
MARK3-212ENST00000558223 CUX1P39880 1505 aa10.8□□□□□ -0.68
MARK3-212ENST00000558223 AK7Q96M32 723 aa10.8□□□□□ -0.68
MARK3-212ENST00000558223 CLIP1P30622 1438 aa10.79□□□□□ -0.68
MARK3-212ENST00000558223 BARGINQ6ZT62 677 aa10.79□□□□□ -0.68
MARK3-212ENST00000558223 E2F4Q16254 413 aa10.78□□□□□ -0.68
MARK3-212ENST00000558223 DPY19L2Q6NUT2 758 aa10.78□□□□□ -0.68
MARK3-212ENST00000558223 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms