RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
LYSMD2-203ENST00000558126 P3H3Q8IVL6 736 aa17.61■□□□□ 0.41
LYSMD2-203ENST00000558126 RAPGEF3O95398 923 aa17.59■□□□□ 0.41
LYSMD2-203ENST00000558126 PTPRMP28827 1452 aa17.58■□□□□ 0.41
LYSMD2-203ENST00000558126 ARID3CA6NKF2 412 aa17.58■□□□□ 0.4
LYSMD2-203ENST00000558126 SAMD9Q5K651 1589 aa17.57■□□□□ 0.4
LYSMD2-203ENST00000558126 FBXO41Q8TF61 875 aa17.57■□□□□ 0.4
LYSMD2-203ENST00000558126 KIF21BO75037 1637 aa17.57■□□□□ 0.4
LYSMD2-203ENST00000558126 ADAMTSL3P82987 1691 aa17.55■□□□□ 0.4
LYSMD2-203ENST00000558126 PLEKHD1A6NEE1 506 aa17.53■□□□□ 0.4
LYSMD2-203ENST00000558126 NUP153P49790 1475 aaKnown RBP17.52■□□□□ 0.4
LYSMD2-203ENST00000558126 RAPGEF6Q8TEU7 1601 aa17.52■□□□□ 0.4
LYSMD2-203ENST00000558126 EEA1Q15075 1411 aa17.52■□□□□ 0.4
LYSMD2-203ENST00000558126 ZBTB12Q9Y330 459 aaPredicted RBP17.51■□□□□ 0.39
LYSMD2-203ENST00000558126 FHOD3Q2V2M9 1422 aa17.5■□□□□ 0.39
LYSMD2-203ENST00000558126 ARID4BQ4LE39 1312 aaPredicted RBP17.48■□□□□ 0.39
LYSMD2-203ENST00000558126 DENND4BO75064 1496 aaPredicted RBP17.48■□□□□ 0.39
LYSMD2-203ENST00000558126 AKNAQ7Z591 1439 aa17.47■□□□□ 0.39
LYSMD2-203ENST00000558126 FRMPD1Q5SYB0 1578 aa17.46■□□□□ 0.39
LYSMD2-203ENST00000558126 BCORL1Q5H9F3 1711 aa17.46■□□□□ 0.39
LYSMD2-203ENST00000558126 PCF11O94913 1555 aaKnown RBP17.43■□□□□ 0.38
LYSMD2-203ENST00000558126 FANCAO15360 1455 aa17.43■□□□□ 0.38
LYSMD2-203ENST00000558126 MAGI2Q86UL8 1455 aa17.43■□□□□ 0.38
LYSMD2-203ENST00000558126 LMTK3Q96Q04 1460 aa17.43■□□□□ 0.38
LYSMD2-203ENST00000558126 POGZQ7Z3K3 1410 aa17.42■□□□□ 0.38
LYSMD2-203ENST00000558126 ARHGEF40Q8TER5 1519 aa17.41■□□□□ 0.38
LYSMD2-203ENST00000558126 MADDQ8WXG6 1647 aa17.39■□□□□ 0.38
LYSMD2-203ENST00000558126 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.39■□□□□ 0.37
LYSMD2-203ENST00000558126 CHRDL2Q6WN34 429 aa17.39■□□□□ 0.37
LYSMD2-203ENST00000558126 EFCAB5A4FU69 1503 aa17.38■□□□□ 0.37
LYSMD2-203ENST00000558126 ZMYM4Q5VZL5 1548 aa17.38■□□□□ 0.37
LYSMD2-203ENST00000558126 CFAP74Q9C0B2 1584 aa17.37■□□□□ 0.37
LYSMD2-203ENST00000558126 PLCH2O75038 1416 aa17.37■□□□□ 0.37
LYSMD2-203ENST00000558126 RICTORQ6R327 1708 aa17.36■□□□□ 0.37
LYSMD2-203ENST00000558126 RANGAP1P46060 587 aaPredicted RBP17.35■□□□□ 0.37
LYSMD2-203ENST00000558126 ZFYVE16Q7Z3T8 1539 aa17.33■□□□□ 0.37
LYSMD2-203ENST00000558126 YEATS2Q9ULM3 1422 aa17.33■□□□□ 0.36
LYSMD2-203ENST00000558126 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.36
LYSMD2-203ENST00000558126 SCAPERQ9BY12 1400 aa17.31■□□□□ 0.36
LYSMD2-203ENST00000558126 AKT1S1Q96B36 256 aa17.31■□□□□ 0.36
LYSMD2-203ENST00000558126 CDK11AQ9UQ88 783 aaPredicted RBP17.31■□□□□ 0.36
LYSMD2-203ENST00000558126 HSPA2P54652 639 aa17.3■□□□□ 0.36
LYSMD2-203ENST00000558126 EFCAB2Q5VUJ9 269 aa17.3■□□□□ 0.36
LYSMD2-203ENST00000558126 TTC37Q6PGP7 1564 aa17.3■□□□□ 0.36
LYSMD2-203ENST00000558126 RIMS1Q86UR5 1692 aaKnown RBP17.29■□□□□ 0.36
LYSMD2-203ENST00000558126 ATP10AO60312 1499 aa17.29■□□□□ 0.36
LYSMD2-203ENST00000558126 FMN1Q68DA7 1419 aa17.28■□□□□ 0.36
LYSMD2-203ENST00000558126 HECW1Q76N89 1606 aa17.27■□□□□ 0.36
LYSMD2-203ENST00000558126 CERKQ8TCT0 537 aa17.26■□□□□ 0.35
LYSMD2-203ENST00000558126 C9orf84Q5VXU9 1444 aa17.26■□□□□ 0.35
LYSMD2-203ENST00000558126 CDK13Q14004 1512 aaKnown RBP17.25■□□□□ 0.35
LYSMD2-203ENST00000558126 MLECQ14165 292 aa17.24■□□□□ 0.35
LYSMD2-203ENST00000558126 ARHGEF12Q9NZN5 1544 aa17.24■□□□□ 0.35
LYSMD2-203ENST00000558126 ZNF518AQ6AHZ1 1483 aa17.21■□□□□ 0.35
LYSMD2-203ENST00000558126 SIGLEC1Q9BZZ2 1709 aa17.21■□□□□ 0.35
LYSMD2-203ENST00000558126 UBTFP17480 764 aaKnown RBP17.2■□□□□ 0.34
LYSMD2-203ENST00000558126 TROQ12816 1431 aaPredicted RBP17.2■□□□□ 0.34
LYSMD2-203ENST00000558126 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
LYSMD2-203ENST00000558126 AFAP1Q8N556 730 aa17.18■□□□□ 0.34
LYSMD2-203ENST00000558126 ATP1B4Q9UN42 357 aaPredicted RBP17.17■□□□□ 0.34
LYSMD2-203ENST00000558126 CLIP1P30622 1438 aa17.16■□□□□ 0.34
LYSMD2-203ENST00000558126 KDM5CP41229 1560 aa17.15■□□□□ 0.34
LYSMD2-203ENST00000558126 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
LYSMD2-203ENST00000558126 CEBPAP49715 358 aaPredicted RBP17.15■□□□□ 0.34
LYSMD2-203ENST00000558126 MLH3Q9UHC1 1453 aa17.15■□□□□ 0.34
LYSMD2-203ENST00000558126 REREQ9P2R6 1566 aa17.14■□□□□ 0.33
LYSMD2-203ENST00000558126 SETD1BQ9UPS6 1966 aaKnown RBP17.13■□□□□ 0.33
LYSMD2-203ENST00000558126 MYO5CQ9NQX4 1742 aa17.12■□□□□ 0.33
LYSMD2-203ENST00000558126 UHRF1BP1Q6BDS2 1440 aa17.12■□□□□ 0.33
LYSMD2-203ENST00000558126 ARHGAP5Q13017 1502 aa17.11■□□□□ 0.33
LYSMD2-203ENST00000558126 KIF14Q15058 1648 aa17.11■□□□□ 0.33
LYSMD2-203ENST00000558126 AGLP35573 1532 aa17.11■□□□□ 0.33
LYSMD2-203ENST00000558126 PREX1Q8TCU6 1659 aa17.1■□□□□ 0.33
LYSMD2-203ENST00000558126 PTPRTO14522 1441 aa17.09■□□□□ 0.33
LYSMD2-203ENST00000558126 REM2Q8IYK8 340 aaPredicted RBP17.08■□□□□ 0.32
LYSMD2-203ENST00000558126 MYT1LQ9UL68 1186 aa17.07■□□□□ 0.32
LYSMD2-203ENST00000558126 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
LYSMD2-203ENST00000558126 CNTLNQ9NXG0 1405 aa17.06■□□□□ 0.32
LYSMD2-203ENST00000558126 TRAPPC8Q9Y2L5 1435 aa17.06■□□□□ 0.32
LYSMD2-203ENST00000558126 CASKIN1Q8WXD9 1431 aa17.05■□□□□ 0.32
LYSMD2-203ENST00000558126 ESF1Q9H501 851 aaKnown RBP17.05■□□□□ 0.32
LYSMD2-203ENST00000558126 CCDC18Q5T9S5 1454 aa17.04■□□□□ 0.32
LYSMD2-203ENST00000558126 STRCQ7RTU9 1775 aa17.03■□□□□ 0.32
LYSMD2-203ENST00000558126 ABCC1P33527 1531 aa17.02■□□□□ 0.32
LYSMD2-203ENST00000558126 CDC42BPBQ9Y5S2 1711 aa17■□□□□ 0.31
LYSMD2-203ENST00000558126 ABCA6Q8N139 1617 aa16.99■□□□□ 0.31
LYSMD2-203ENST00000558126 IQSEC2Q5JU85 1478 aa16.99■□□□□ 0.31
LYSMD2-203ENST00000558126 NPATQ14207 1427 aa16.99■□□□□ 0.31
LYSMD2-203ENST00000558126 NCOA1Q15788 1441 aa16.98■□□□□ 0.31
LYSMD2-203ENST00000558126 PREX2Q70Z35 1606 aa16.98■□□□□ 0.31
LYSMD2-203ENST00000558126 MKRN4PQ13434 485 aaPredicted RBP16.96■□□□□ 0.31
LYSMD2-203ENST00000558126 KIAA1107Q9UPP5 1409 aa16.96■□□□□ 0.3
LYSMD2-203ENST00000558126 C3P01024 1663 aa16.95■□□□□ 0.3
LYSMD2-203ENST00000558126 ZMYM3Q14202 1370 aa16.95■□□□□ 0.3
LYSMD2-203ENST00000558126 DISP3Q9P2K9 1392 aa16.95■□□□□ 0.3
LYSMD2-203ENST00000558126 SPAG9O60271 1321 aaKnown RBP16.95■□□□□ 0.3
LYSMD2-203ENST00000558126 LTBP4Q8N2S1 1624 aa16.94■□□□□ 0.3
LYSMD2-203ENST00000558126 GPATCH8Q9UKJ3 1502 aaKnown RBP16.94■□□□□ 0.3
LYSMD2-203ENST00000558126 KIDINS220Q9ULH0 1771 aa16.94■□□□□ 0.3
LYSMD2-203ENST00000558126 FYCO1Q9BQS8 1478 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms