RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 RIMBP3BA6NNM3 1639 aa30.36■■■□□ 2.45
SNRPA1-205ENST00000558036 RIMBP3Q9UFD9 1639 aa30.36■■■□□ 2.45
SNRPA1-205ENST00000558036 WDR7Q9Y4E6 1490 aa30.36■■■□□ 2.45
SNRPA1-205ENST00000558036 DAPK1P53355 1430 aa30.36■■■□□ 2.45
SNRPA1-205ENST00000558036 NPM1P06748 294 aaKnown RBP eCLIP30.35■■■□□ 2.45
SNRPA1-205ENST00000558036 ABCC5O15440 1437 aa30.35■■■□□ 2.45
SNRPA1-205ENST00000558036 ASXL2Q76L83 1435 aa30.34■■■□□ 2.45
SNRPA1-205ENST00000558036 RRP7BPQ9NSQ0 103 aa30.34■■■□□ 2.45
SNRPA1-205ENST00000558036 DNMT1P26358 1616 aaKnown RBP30.32■■■□□ 2.44
SNRPA1-205ENST00000558036 HFM1A2PYH4 1435 aa30.32■■■□□ 2.44
SNRPA1-205ENST00000558036 PREX2Q70Z35 1606 aa30.32■■■□□ 2.44
SNRPA1-205ENST00000558036 DHX57Q6P158 1386 aaKnown RBP30.32■■■□□ 2.44
SNRPA1-205ENST00000558036 CDC42BPBQ9Y5S2 1711 aa30.31■■■□□ 2.44
SNRPA1-205ENST00000558036 NAIPQ13075 1403 aa30.29■■■□□ 2.44
SNRPA1-205ENST00000558036 ARHGAP5Q13017 1502 aa30.28■■■□□ 2.44
SNRPA1-205ENST00000558036 HNRNPMP52272 730 aaKnown RBP eCLIP30.25■■■□□ 2.43
SNRPA1-205ENST00000558036 MYO5CQ9NQX4 1742 aa30.24■■■□□ 2.43
SNRPA1-205ENST00000558036 SAMD9LQ8IVG5 1584 aa30.24■■■□□ 2.43
SNRPA1-205ENST00000558036 PLCH2O75038 1416 aa30.21■■■□□ 2.43
SNRPA1-205ENST00000558036 AKNAQ7Z591 1439 aa30.2■■■□□ 2.42
SNRPA1-205ENST00000558036 MBD5Q9P267 1494 aa30.17■■■□□ 2.42
SNRPA1-205ENST00000558036 ROCK1Q13464 1354 aa30.16■■■□□ 2.42
SNRPA1-205ENST00000558036 CROCC2H7BZ55 1655 aa30.14■■■□□ 2.42
SNRPA1-205ENST00000558036 SYCP2Q9BX26 1530 aa30.14■■■□□ 2.42
SNRPA1-205ENST00000558036 EFCAB2Q5VUJ9 269 aa30.13■■■□□ 2.41
SNRPA1-205ENST00000558036 GCC2Q8IWJ2 1684 aa30.13■■■□□ 2.41
SNRPA1-205ENST00000558036 KDM6BO15054 1643 aa30.13■■■□□ 2.41
SNRPA1-205ENST00000558036 ABCA9Q8IUA7 1624 aa30.12■■■□□ 2.41
SNRPA1-205ENST00000558036 NCOA1Q15788 1441 aa30.1■■■□□ 2.41
SNRPA1-205ENST00000558036 C9orf84Q5VXU9 1444 aa30.1■■■□□ 2.41
SNRPA1-205ENST00000558036 ARHGEF5Q12774 1597 aa30.09■■■□□ 2.41
SNRPA1-205ENST00000558036 TSPY4P0CV99 314 aa30.09■■■□□ 2.41
SNRPA1-205ENST00000558036 TSPY10P0CW01 314 aa30.09■■■□□ 2.41
SNRPA1-205ENST00000558036 ARHGEF12Q9NZN5 1544 aa30.07■■■□□ 2.4
SNRPA1-205ENST00000558036 CCDC141Q6ZP82 1450 aa30.07■■■□□ 2.4
SNRPA1-205ENST00000558036 ADGRL2O95490 1459 aa30.06■■■□□ 2.4
SNRPA1-205ENST00000558036 SHANK2Q9UPX8 1470 aa30.06■■■□□ 2.4
SNRPA1-205ENST00000558036 MAPKBP1O60336 1514 aa30.05■■■□□ 2.4
SNRPA1-205ENST00000558036 KIAA1107Q9UPP5 1409 aa30.05■■■□□ 2.4
SNRPA1-205ENST00000558036 ANKRD30AQ9BXX3 1397 aa30.04■■■□□ 2.4
SNRPA1-205ENST00000558036 ADGBQ8N7X0 1667 aa30.04■■■□□ 2.4
SNRPA1-205ENST00000558036 CLSPNQ9HAW4 1339 aa30.04■■■□□ 2.4
SNRPA1-205ENST00000558036 PLEKHH2Q8IVE3 1493 aa30.03■■■□□ 2.4
SNRPA1-205ENST00000558036 ARAP3Q8WWN8 1544 aa30.03■■■□□ 2.4
SNRPA1-205ENST00000558036 FANCAO15360 1455 aa30.02■■■□□ 2.4
SNRPA1-205ENST00000558036 RSPH4AQ5TD94 716 aa30.01■■■□□ 2.39
SNRPA1-205ENST00000558036 ABCC1P33527 1531 aa30■■■□□ 2.39
SNRPA1-205ENST00000558036 TRIM52Q96A61 297 aa30■■■□□ 2.39
SNRPA1-205ENST00000558036 CD109Q6YHK3 1445 aa29.97■■■□□ 2.39
SNRPA1-205ENST00000558036 TRAPPC8Q9Y2L5 1435 aa29.97■■■□□ 2.39
SNRPA1-205ENST00000558036 KIF15Q9NS87 1388 aa29.94■■■□□ 2.38
SNRPA1-205ENST00000558036 AFAP1Q8N556 730 aa29.92■■■□□ 2.38
SNRPA1-205ENST00000558036 ANKRD50Q9ULJ7 1429 aa29.91■■■□□ 2.38
SNRPA1-205ENST00000558036 ADGRL1O94910 1474 aa29.89■■■□□ 2.38
SNRPA1-205ENST00000558036 SIN3AQ96ST3 1273 aa29.87■■■□□ 2.37
SNRPA1-205ENST00000558036 MAST1Q9Y2H9 1570 aa29.87■■■□□ 2.37
SNRPA1-205ENST00000558036 SCAPERQ9BY12 1400 aa29.87■■■□□ 2.37
SNRPA1-205ENST00000558036 DENND4BO75064 1496 aaPredicted RBP29.84■■■□□ 2.37
SNRPA1-205ENST00000558036 MPHOSPH9Q99550 1183 aa29.84■■■□□ 2.37
SNRPA1-205ENST00000558036 NEUROD1Q13562 356 aa29.83■■■□□ 2.37
SNRPA1-205ENST00000558036 FAM69CQ0P6D2 419 aa29.82■■■□□ 2.36
SNRPA1-205ENST00000558036 SPAG9O60271 1321 aaKnown RBP29.81■■■□□ 2.36
SNRPA1-205ENST00000558036 FOXD1Q16676 465 aa29.78■■■□□ 2.36
SNRPA1-205ENST00000558036 PLXNC1O60486 1568 aa29.77■■■□□ 2.36
SNRPA1-205ENST00000558036 DIP2BQ9P265 1576 aa29.76■■■□□ 2.36
SNRPA1-205ENST00000558036 MAP3K4Q9Y6R4 1608 aa29.76■■■□□ 2.35
SNRPA1-205ENST00000558036 SLC4A1APQ9BWU0 796 aaKnown RBP29.76■■■□□ 2.35
SNRPA1-205ENST00000558036 GLI2P10070 1586 aa29.75■■■□□ 2.35
SNRPA1-205ENST00000558036 ZFYVE16Q7Z3T8 1539 aa29.74■■■□□ 2.35
SNRPA1-205ENST00000558036 ACIN1Q9UKV3 1341 aaKnown RBP29.73■■■□□ 2.35
SNRPA1-205ENST00000558036 PZPP20742 1482 aa29.73■■■□□ 2.35
SNRPA1-205ENST00000558036 CFAP74Q9C0B2 1584 aa29.73■■■□□ 2.35
SNRPA1-205ENST00000558036 MYT1LQ9UL68 1186 aa29.72■■■□□ 2.35
SNRPA1-205ENST00000558036 NUP155O75694 1391 aa29.71■■■□□ 2.35
SNRPA1-205ENST00000558036 RTEL1-TNFRSF6BF6WH68 1400 aa29.7■■■□□ 2.35
SNRPA1-205ENST00000558036 NEO1Q92859 1461 aa29.69■■■□□ 2.34
SNRPA1-205ENST00000558036 ATP7AQ04656 1500 aa29.68■■■□□ 2.34
SNRPA1-205ENST00000558036 DUOX2Q9NRD8 1548 aa29.68■■■□□ 2.34
SNRPA1-205ENST00000558036 ZNF518AQ6AHZ1 1483 aa29.68■■■□□ 2.34
SNRPA1-205ENST00000558036 INO80Q9ULG1 1556 aaPredicted RBP29.67■■■□□ 2.34
SNRPA1-205ENST00000558036 POGZQ7Z3K3 1410 aa29.67■■■□□ 2.34
SNRPA1-205ENST00000558036 RAPGEF3O95398 923 aa29.65■■■□□ 2.34
SNRPA1-205ENST00000558036 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.63■■■□□ 2.332e-7■□□□□ 8
SNRPA1-205ENST00000558036 ERBINQ96RT1 1412 aa29.62■■■□□ 2.33
SNRPA1-205ENST00000558036 PKD2Q13563 968 aa29.62■■■□□ 2.33
SNRPA1-205ENST00000558036 TSPOAP1O95153 1857 aa29.58■■■□□ 2.33
SNRPA1-205ENST00000558036 ANKRD30BQ9BXX2 1392 aa29.58■■■□□ 2.33
SNRPA1-205ENST00000558036 KDM5DQ9BY66 1539 aa29.58■■■□□ 2.33
SNRPA1-205ENST00000558036 KDM5CP41229 1560 aa29.58■■■□□ 2.33
SNRPA1-205ENST00000558036 KIDINS220Q9ULH0 1771 aa29.57■■■□□ 2.32
SNRPA1-205ENST00000558036 UNC13BO14795 1591 aa29.55■■■□□ 2.32
SNRPA1-205ENST00000558036 TONSLQ96HA7 1378 aa29.54■■■□□ 2.32
SNRPA1-205ENST00000558036 FAM135AQ9P2D6 1515 aa29.54■■■□□ 2.32
SNRPA1-205ENST00000558036 PPRC1Q5VV67 1664 aaKnown RBP29.54■■■□□ 2.32
SNRPA1-205ENST00000558036 KIF13AQ9H1H9 1805 aa29.52■■■□□ 2.32
SNRPA1-205ENST00000558036 MLH3Q9UHC1 1453 aa29.51■■■□□ 2.31
SNRPA1-205ENST00000558036 HECW2Q9P2P5 1572 aa29.5■■■□□ 2.31
SNRPA1-205ENST00000558036 TIMELESSQ9UNS1 1208 aa29.5■■■□□ 2.31
SNRPA1-205ENST00000558036 DHX29Q7Z478 1369 aaKnown RBP29.5■■■□□ 2.31
SNRPA1-205ENST00000558036 KIF3BO15066 747 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms