RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 PTPN23Q9H3S7 1636 aa18.83■□□□□ 0.6
CPNE6-204ENST00000557829 KIF14Q15058 1648 aa18.82■□□□□ 0.6
CPNE6-204ENST00000557829 KDM5BQ9UGL1 1544 aa18.82■□□□□ 0.6
CPNE6-204ENST00000557829 ZCCHC11Q5TAX3 1644 aaKnown RBP18.79■□□□□ 0.6
CPNE6-204ENST00000557829 ABCC10Q5T3U5 1492 aa18.75■□□□□ 0.59
CPNE6-204ENST00000557829 GPATCH8Q9UKJ3 1502 aaKnown RBP18.74■□□□□ 0.59
CPNE6-204ENST00000557829 PPP1R15AO75807 674 aaPredicted RBP18.74■□□□□ 0.59
CPNE6-204ENST00000557829 SIN3AQ96ST3 1273 aa18.74■□□□□ 0.59
CPNE6-204ENST00000557829 MIA2Q96PC5 1412 aa18.73■□□□□ 0.59
CPNE6-204ENST00000557829 TRHP20396 242 aaPredicted RBP18.73■□□□□ 0.59
CPNE6-204ENST00000557829 TCOF1Q13428 1488 aaKnown RBP18.73■□□□□ 0.59
CPNE6-204ENST00000557829 ITSN2Q9NZM3 1697 aa18.73■□□□□ 0.59
CPNE6-204ENST00000557829 KCNH8Q96L42 1107 aa18.71■□□□□ 0.59
CPNE6-204ENST00000557829 ZNF644Q9H582 1327 aaPredicted RBP18.71■□□□□ 0.58
CPNE6-204ENST00000557829 CCER2I3L3R5 266 aa18.69■□□□□ 0.58
CPNE6-204ENST00000557829 NPM1P06748 294 aaKnown RBP eCLIP18.69■□□□□ 0.58
CPNE6-204ENST00000557829 CFDP1Q9UEE9 299 aaPredicted RBP18.69■□□□□ 0.58
CPNE6-204ENST00000557829 HFM1A2PYH4 1435 aa18.68■□□□□ 0.58
CPNE6-204ENST00000557829 PTPRKQ15262 1439 aa18.68■□□□□ 0.58
CPNE6-204ENST00000557829 KIF13AQ9H1H9 1805 aa18.68■□□□□ 0.58
CPNE6-204ENST00000557829 ASXL2Q76L83 1435 aa18.67■□□□□ 0.58
CPNE6-204ENST00000557829 CDC42BPAQ5VT25 1732 aa18.67■□□□□ 0.58
CPNE6-204ENST00000557829 DDX10Q13206 875 aaKnown RBP18.66■□□□□ 0.58
CPNE6-204ENST00000557829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.66■□□□□ 0.58
CPNE6-204ENST00000557829 TTC37Q6PGP7 1564 aa18.66■□□□□ 0.58
CPNE6-204ENST00000557829 WDR7Q9Y4E6 1490 aa18.65■□□□□ 0.58
CPNE6-204ENST00000557829 DIP2BQ9P265 1576 aa18.65■□□□□ 0.58
CPNE6-204ENST00000557829 ZNF777Q9ULD5 760 aaPredicted RBP18.64■□□□□ 0.57
CPNE6-204ENST00000557829 GCC2Q8IWJ2 1684 aa18.63■□□□□ 0.57
CPNE6-204ENST00000557829 CAMSAP2Q08AD1 1489 aa18.62■□□□□ 0.57
CPNE6-204ENST00000557829 DNMT1P26358 1616 aaKnown RBP18.62■□□□□ 0.57
CPNE6-204ENST00000557829 TONSLQ96HA7 1378 aa18.6■□□□□ 0.57
CPNE6-204ENST00000557829 ANP32CO43423 234 aa18.58■□□□□ 0.57
CPNE6-204ENST00000557829 FAM69CQ0P6D2 419 aa18.58■□□□□ 0.57
CPNE6-204ENST00000557829 TSHZ2Q9NRE2 1034 aa18.58■□□□□ 0.57
CPNE6-204ENST00000557829 PREX2Q70Z35 1606 aa18.58■□□□□ 0.57
CPNE6-204ENST00000557829 NAIPQ13075 1403 aa18.58■□□□□ 0.56
CPNE6-204ENST00000557829 ABCC5O15440 1437 aa18.57■□□□□ 0.56
CPNE6-204ENST00000557829 CROCC2H7BZ55 1655 aa18.57■□□□□ 0.56
CPNE6-204ENST00000557829 CHIC2Q9UKJ5 165 aa18.57■□□□□ 0.56
CPNE6-204ENST00000557829 DAPK1P53355 1430 aa18.57■□□□□ 0.56
CPNE6-204ENST00000557829 CDC42BPBQ9Y5S2 1711 aa18.57■□□□□ 0.56
CPNE6-204ENST00000557829 PLCH2O75038 1416 aa18.55■□□□□ 0.56
CPNE6-204ENST00000557829 ARHGAP5Q13017 1502 aa18.55■□□□□ 0.56
CPNE6-204ENST00000557829 TSPOAP1O95153 1857 aa18.54■□□□□ 0.56
CPNE6-204ENST00000557829 ADGBQ8N7X0 1667 aa18.54■□□□□ 0.56
CPNE6-204ENST00000557829 SAMD9LQ8IVG5 1584 aa18.53■□□□□ 0.56
CPNE6-204ENST00000557829 MYO5CQ9NQX4 1742 aa18.53■□□□□ 0.56
CPNE6-204ENST00000557829 AKNAQ7Z591 1439 aa18.53■□□□□ 0.56
CPNE6-204ENST00000557829 HNRNPMP52272 730 aaKnown RBP eCLIP18.52■□□□□ 0.56
CPNE6-204ENST00000557829 KDM6BO15054 1643 aa18.52■□□□□ 0.55
CPNE6-204ENST00000557829 RRP7BPQ9NSQ0 103 aa18.51■□□□□ 0.55
CPNE6-204ENST00000557829 ABCA9Q8IUA7 1624 aa18.5■□□□□ 0.55
CPNE6-204ENST00000557829 MBD5Q9P267 1494 aa18.5■□□□□ 0.55
CPNE6-204ENST00000557829 GLI2P10070 1586 aa18.48■□□□□ 0.55
CPNE6-204ENST00000557829 EFCAB2Q5VUJ9 269 aa18.48■□□□□ 0.55
CPNE6-204ENST00000557829 PPRC1Q5VV67 1664 aaKnown RBP18.47■□□□□ 0.55
CPNE6-204ENST00000557829 MAP3K4Q9Y6R4 1608 aa18.47■□□□□ 0.55
CPNE6-204ENST00000557829 NEFLP07196 543 aa18.47■□□□□ 0.55
CPNE6-204ENST00000557829 FKBP8Q14318 412 aa18.47■□□□□ 0.55
CPNE6-204ENST00000557829 SYCP2Q9BX26 1530 aa18.46■□□□□ 0.55
CPNE6-204ENST00000557829 ROCK1Q13464 1354 aa18.45■□□□□ 0.54
CPNE6-204ENST00000557829 ARHGEF12Q9NZN5 1544 aa18.45■□□□□ 0.54
CPNE6-204ENST00000557829 ARAP3Q8WWN8 1544 aa18.45■□□□□ 0.54
CPNE6-204ENST00000557829 ARHGEF5Q12774 1597 aa18.44■□□□□ 0.54
CPNE6-204ENST00000557829 KIAA1107Q9UPP5 1409 aa18.44■□□□□ 0.54
CPNE6-204ENST00000557829 HIRIP3Q9BW71 556 aaPredicted RBP18.43■□□□□ 0.54
CPNE6-204ENST00000557829 C9orf84Q5VXU9 1444 aa18.42■□□□□ 0.54
CPNE6-204ENST00000557829 FANCAO15360 1455 aa18.42■□□□□ 0.54
CPNE6-204ENST00000557829 CCDC141Q6ZP82 1450 aa18.42■□□□□ 0.54
CPNE6-204ENST00000557829 PLEKHH2Q8IVE3 1493 aa18.42■□□□□ 0.54
CPNE6-204ENST00000557829 NCOA1Q15788 1441 aa18.42■□□□□ 0.54
CPNE6-204ENST00000557829 CD109Q6YHK3 1445 aa18.42■□□□□ 0.54
CPNE6-204ENST00000557829 SHANK2Q9UPX8 1470 aa18.41■□□□□ 0.54
CPNE6-204ENST00000557829 ABCC1P33527 1531 aa18.41■□□□□ 0.54
CPNE6-204ENST00000557829 ADGRL2O95490 1459 aa18.4■□□□□ 0.54
CPNE6-204ENST00000557829 TSPY4P0CV99 314 aa18.4■□□□□ 0.54
CPNE6-204ENST00000557829 TSPY10P0CW01 314 aa18.4■□□□□ 0.54
CPNE6-204ENST00000557829 TRAPPC8Q9Y2L5 1435 aa18.38■□□□□ 0.53
CPNE6-204ENST00000557829 RSPH4AQ5TD94 716 aa18.38■□□□□ 0.53
CPNE6-204ENST00000557829 ANKRD30AQ9BXX3 1397 aa18.37■□□□□ 0.53
CPNE6-204ENST00000557829 ANP32EQ9BTT0 268 aa18.37■□□□□ 0.53
CPNE6-204ENST00000557829 DENND4BO75064 1496 aaPredicted RBP18.37■□□□□ 0.53
CPNE6-204ENST00000557829 TRIM52Q96A61 297 aa18.35■□□□□ 0.53
CPNE6-204ENST00000557829 ADGRL1O94910 1474 aa18.34■□□□□ 0.53
CPNE6-204ENST00000557829 AFAP1Q8N556 730 aa18.34■□□□□ 0.53
CPNE6-204ENST00000557829 BCANQ96GW7 911 aa18.34■□□□□ 0.53
CPNE6-204ENST00000557829 SCAPERQ9BY12 1400 aa18.33■□□□□ 0.53
CPNE6-204ENST00000557829 KIF15Q9NS87 1388 aa18.32■□□□□ 0.52
CPNE6-204ENST00000557829 COL17A1Q9UMD9 1497 aaPredicted RBP18.32■□□□□ 0.52
CPNE6-204ENST00000557829 MAST1Q9Y2H9 1570 aa18.31■□□□□ 0.52
CPNE6-204ENST00000557829 HSPA5P11021 654 aaKnown RBP18.3■□□□□ 0.52
CPNE6-204ENST00000557829 EIF4G2P78344 907 aaKnown RBP eCLIP18.3■□□□□ 0.52
CPNE6-204ENST00000557829 ANKRD50Q9ULJ7 1429 aa18.29■□□□□ 0.52
CPNE6-204ENST00000557829 WASHC2AQ641Q2 1341 aa18.29■□□□□ 0.52
CPNE6-204ENST00000557829 POLR1AO95602 1720 aaPredicted RBP18.28■□□□□ 0.52
CPNE6-204ENST00000557829 MPHOSPH9Q99550 1183 aa18.28■□□□□ 0.52
CPNE6-204ENST00000557829 CNTLNQ9NXG0 1405 aa18.28■□□□□ 0.52
CPNE6-204ENST00000557829 TEX14Q8IWB6 1497 aa18.28■□□□□ 0.52
CPNE6-204ENST00000557829 ERICH6BQ5W0A0 696 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms