RNA–Protein interactions for RNA: ENST00000557339.5

LINC01146-207, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 3 BASIC

Gene LINC01146, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-207ENST00000557339 MS4A4AQ96JQ5 239 aa10.85□□□□□ -0.67
LINC01146-207ENST00000557339 ILDR1Q86SU0 546 aaPredicted RBP10.84□□□□□ -0.67
LINC01146-207ENST00000557339 PDCD7Q8N8D1 485 aaKnown RBP10.84□□□□□ -0.67
LINC01146-207ENST00000557339 CFAP44Q96MT7 982 aa10.84□□□□□ -0.67
LINC01146-207ENST00000557339 SEC24BO95487 1268 aa10.83□□□□□ -0.68
LINC01146-207ENST00000557339 OCEL1Q9H607 264 aa10.83□□□□□ -0.68
LINC01146-207ENST00000557339 NCAPD3P42695 1498 aa10.82□□□□□ -0.68
LINC01146-207ENST00000557339 DPY19L2Q6NUT2 758 aa10.82□□□□□ -0.68
LINC01146-207ENST00000557339 PLCG2P16885 1265 aa10.81□□□□□ -0.68
LINC01146-207ENST00000557339 SPRYD3Q8NCJ5 442 aa10.81□□□□□ -0.68
LINC01146-207ENST00000557339 PPP1R37O75864 691 aa10.79□□□□□ -0.68
LINC01146-207ENST00000557339 PLCB2Q00722 1185 aa10.78□□□□□ -0.68
LINC01146-207ENST00000557339 RYDENQ9NUL5 291 aaKnown RBP10.77□□□□□ -0.69
LINC01146-207ENST00000557339 POTEB2H3BUK9 544 aa10.73□□□□□ -0.69
LINC01146-207ENST00000557339 CCDC88BA6NC98 1476 aa10.72□□□□□ -0.69
LINC01146-207ENST00000557339 POTEJP0CG39 1038 aa10.69□□□□□ -0.7
LINC01146-207ENST00000557339 L3MBTL3Q96JM7 780 aaPredicted RBP10.68□□□□□ -0.7
LINC01146-207ENST00000557339 BOLA1Q9Y3E2 137 aa10.68□□□□□ -0.7
LINC01146-207ENST00000557339 MICALL2Q8IY33 904 aa10.67□□□□□ -0.7
LINC01146-207ENST00000557339 HAP1P54257 671 aaPredicted RBP10.66□□□□□ -0.7
LINC01146-207ENST00000557339 TSHZ2Q9NRE2 1034 aa10.66□□□□□ -0.7
LINC01146-207ENST00000557339 PRDM2Q13029 1718 aa10.66□□□□□ -0.7
LINC01146-207ENST00000557339 G3V3G9 751 aa10.64□□□□□ -0.71
LINC01146-207ENST00000557339 TMEM121BQ9BXQ6 578 aaPredicted RBP10.64□□□□□ -0.71
LINC01146-207ENST00000557339 CADPS2Q86UW7 1296 aa10.62□□□□□ -0.71
LINC01146-207ENST00000557339 LHX8Q68G74 356 aa10.6□□□□□ -0.71
LINC01146-207ENST00000557339 C3orf67Q6ZVT6 689 aa10.57□□□□□ -0.72
LINC01146-207ENST00000557339 TMEM92Q6UXU6 159 aa10.56□□□□□ -0.72
LINC01146-207ENST00000557339 LAMC3Q9Y6N6 1575 aa10.56□□□□□ -0.72
LINC01146-207ENST00000557339 CFTRP13569 1480 aa10.55□□□□□ -0.72
LINC01146-207ENST00000557339 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.54□□□□□ -0.72
LINC01146-207ENST00000557339 CADPSQ9ULU8 1353 aa10.53□□□□□ -0.72
LINC01146-207ENST00000557339 OTUD5Q96G74 571 aa10.53□□□□□ -0.72
LINC01146-207ENST00000557339 SCUBE2Q9NQ36 999 aa10.53□□□□□ -0.72
LINC01146-207ENST00000557339 NCKAP5LQ9HCH0 1330 aa10.53□□□□□ -0.72
LINC01146-207ENST00000557339 MAMSTRQ6ZN01 415 aa10.52□□□□□ -0.73
LINC01146-207ENST00000557339 CRISPLD2Q9H0B8 497 aa10.51□□□□□ -0.73
LINC01146-207ENST00000557339 C2orf72A6NCS6 295 aa10.49□□□□□ -0.73
LINC01146-207ENST00000557339 SLC24A1O60721 1099 aa10.49□□□□□ -0.73
LINC01146-207ENST00000557339 KIF3CO14782 793 aa10.48□□□□□ -0.73
LINC01146-207ENST00000557339 SLAIN1Q8ND83 568 aa10.48□□□□□ -0.73
LINC01146-207ENST00000557339 TMC2Q8TDI7 906 aa10.48□□□□□ -0.73
LINC01146-207ENST00000557339 LARP6Q9BRS8 491 aaKnown RBP10.48□□□□□ -0.73
LINC01146-207ENST00000557339 KDM2AQ9Y2K7 1162 aa10.48□□□□□ -0.73
LINC01146-207ENST00000557339 CUX2O14529 1486 aa10.48□□□□□ -0.73
LINC01146-207ENST00000557339 NESP48681 1621 aa10.47□□□□□ -0.73
LINC01146-207ENST00000557339 PDE4AP27815 886 aa10.47□□□□□ -0.73
LINC01146-207ENST00000557339 GPHNQ9NQX3 736 aaPredicted RBP10.47□□□□□ -0.73
LINC01146-207ENST00000557339 ABCC8Q09428 1581 aa10.47□□□□□ -0.73
LINC01146-207ENST00000557339 KIF21AQ7Z4S6 1674 aa10.45□□□□□ -0.74
LINC01146-207ENST00000557339 FANCD2Q9BXW9 1451 aa10.45□□□□□ -0.74
LINC01146-207ENST00000557339 PDS5BQ9NTI5 1447 aa10.45□□□□□ -0.74
LINC01146-207ENST00000557339 DSG2Q14126 1118 aa10.44□□□□□ -0.74
LINC01146-207ENST00000557339 VSIG10Q8N0Z9 540 aa10.43□□□□□ -0.74
LINC01146-207ENST00000557339 CEP164Q9UPV0 1460 aa10.42□□□□□ -0.74
LINC01146-207ENST00000557339 WRNQ14191 1432 aaPredicted RBP eCLIP10.42□□□□□ -0.74
LINC01146-207ENST00000557339 MFSD10Q14728 455 aa10.42□□□□□ -0.74
LINC01146-207ENST00000557339 DDX27Q96GQ7 796 aaKnown RBP10.42□□□□□ -0.74
LINC01146-207ENST00000557339 BIVM-ERCC5R4GMW8 1640 aa10.41□□□□□ -0.74
LINC01146-207ENST00000557339 FOXK1P85037 733 aa10.41□□□□□ -0.74
LINC01146-207ENST00000557339 SYNJ1O43426 1573 aa10.4□□□□□ -0.74
LINC01146-207ENST00000557339 PPP1R15BQ5SWA1 713 aa10.4□□□□□ -0.74
LINC01146-207ENST00000557339 TOP2BQ02880 1626 aa10.4□□□□□ -0.75
LINC01146-207ENST00000557339 PLPP6Q8IY26 295 aa10.39□□□□□ -0.75
LINC01146-207ENST00000557339 WDR70Q9NW82 654 aa10.39□□□□□ -0.75
LINC01146-207ENST00000557339 ERCC6Q03468 1493 aa10.37□□□□□ -0.75
LINC01146-207ENST00000557339 DNMBPQ6XZF7 1577 aa10.36□□□□□ -0.75
LINC01146-207ENST00000557339 CUX1P39880 1505 aa10.36□□□□□ -0.75
LINC01146-207ENST00000557339 MRC2Q9UBG0 1479 aa10.32□□□□□ -0.76
LINC01146-207ENST00000557339 HOXB3P14651 431 aaPredicted RBP10.32□□□□□ -0.76
LINC01146-207ENST00000557339 TOPBP1Q92547 1522 aa10.32□□□□□ -0.76
LINC01146-207ENST00000557339 E2F4Q16254 413 aa10.31□□□□□ -0.76
LINC01146-207ENST00000557339 URB2Q14146 1524 aaKnown RBP10.31□□□□□ -0.76
LINC01146-207ENST00000557339 CAMK2BQ13554 666 aa10.3□□□□□ -0.76
LINC01146-207ENST00000557339 EMILIN3Q9NT22 766 aa10.3□□□□□ -0.76
LINC01146-207ENST00000557339 THOC2Q8NI27 1593 aaKnown RBP10.29□□□□□ -0.76
LINC01146-207ENST00000557339 KCNV2Q8TDN2 545 aa10.28□□□□□ -0.76
LINC01146-207ENST00000557339 UPF1Q92900 1129 aaKnown RBP eCLIP10.28□□□□□ -0.76
LINC01146-207ENST00000557339 FGD5Q6ZNL6 1462 aa10.28□□□□□ -0.76
LINC01146-207ENST00000557339 WDR62O43379 1518 aa10.28□□□□□ -0.76
LINC01146-207ENST00000557339 DOK7Q18PE1 504 aa10.27□□□□□ -0.77
LINC01146-207ENST00000557339 SNPHO15079 494 aa10.26□□□□□ -0.77
LINC01146-207ENST00000557339 SLC34A2O95436 690 aa10.25□□□□□ -0.77
LINC01146-207ENST00000557339 POLA1P09884 1462 aaPredicted RBP10.24□□□□□ -0.77
LINC01146-207ENST00000557339 OXER1Q8TDS5 423 aa10.24□□□□□ -0.77
LINC01146-207ENST00000557339 EEA1Q15075 1411 aa10.24□□□□□ -0.77
LINC01146-207ENST00000557339 ZNF710Q8N1W2 664 aa10.23□□□□□ -0.77
LINC01146-207ENST00000557339 PTCD2Q8WV60 388 aaKnown RBP10.23□□□□□ -0.77
LINC01146-207ENST00000557339 KHSRPQ92945 711 aaKnown RBP eCLIP10.23□□□□□ -0.77
LINC01146-207ENST00000557339 WDR97A6NE52 1622 aa10.22□□□□□ -0.77
LINC01146-207ENST00000557339 DPYSL4O14531 572 aa10.22□□□□□ -0.77
LINC01146-207ENST00000557339 PCDHGA4Q9Y5G9 962 aa10.22□□□□□ -0.77
LINC01146-207ENST00000557339 ARSIQ5FYB1 569 aa10.21□□□□□ -0.77
LINC01146-207ENST00000557339 P3H3Q8IVL6 736 aa10.21□□□□□ -0.77
LINC01146-207ENST00000557339 FAM163AQ96GL9 167 aaPredicted RBP10.21□□□□□ -0.77
LINC01146-207ENST00000557339 SOGA1O94964 1423 aa10.21□□□□□ -0.78
LINC01146-207ENST00000557339 RIMBP2O15034 1052 aa10.2□□□□□ -0.78
LINC01146-207ENST00000557339 MAP3K9P80192 1104 aa10.2□□□□□ -0.78
LINC01146-207ENST00000557339 TARBP1Q13395 1621 aaKnown RBP10.19□□□□□ -0.78
LINC01146-207ENST00000557339 ABCA10Q8WWZ4 1543 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms