RNA–Protein interactions for RNA: ENST00000557165.5

CCNK-208, Transcript of cyclin K, humanhuman

TSL 5

Gene CCNK, Length 955 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-208ENST00000557165 ABCC2Q92887 1545 aa17.46■□□□□ 0.39
CCNK-208ENST00000557165 ATP10BO94823 1461 aa17.44■□□□□ 0.38
CCNK-208ENST00000557165 SHANK2Q9UPX8 1470 aa17.44■□□□□ 0.38
CCNK-208ENST00000557165 PLEKHD1A6NEE1 506 aa17.43■□□□□ 0.38
CCNK-208ENST00000557165 ZNF316A6NFI3 1004 aaPredicted RBP17.43■□□□□ 0.38
CCNK-208ENST00000557165 ITGAEP38570 1179 aa17.43■□□□□ 0.38
CCNK-208ENST00000557165 DAPK1P53355 1430 aa17.43■□□□□ 0.38
CCNK-208ENST00000557165 CDC42BPAQ5VT25 1732 aa17.43■□□□□ 0.38
CCNK-208ENST00000557165 ADGRL2O95490 1459 aa17.43■□□□□ 0.38
CCNK-208ENST00000557165 ABCC10Q5T3U5 1492 aa17.42■□□□□ 0.38
CCNK-208ENST00000557165 GPATCH8Q9UKJ3 1502 aaKnown RBP17.42■□□□□ 0.38
CCNK-208ENST00000557165 PTPRKQ15262 1439 aa17.41■□□□□ 0.38
CCNK-208ENST00000557165 ARHGEF5Q12774 1597 aa17.4■□□□□ 0.38
CCNK-208ENST00000557165 CAMSAP2Q08AD1 1489 aa17.4■□□□□ 0.38
CCNK-208ENST00000557165 PREX2Q70Z35 1606 aa17.39■□□□□ 0.37
CCNK-208ENST00000557165 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
CCNK-208ENST00000557165 RSPH4AQ5TD94 716 aa17.36■□□□□ 0.37
CCNK-208ENST00000557165 PLEKHH2Q8IVE3 1493 aa17.36■□□□□ 0.37
CCNK-208ENST00000557165 ABCC5O15440 1437 aa17.35■□□□□ 0.37
CCNK-208ENST00000557165 MAPK8IP2Q13387 824 aaPredicted RBP17.34■□□□□ 0.37
CCNK-208ENST00000557165 ARAP3Q8WWN8 1544 aa17.34■□□□□ 0.37
CCNK-208ENST00000557165 KDM5BQ9UGL1 1544 aa17.33■□□□□ 0.37
CCNK-208ENST00000557165 CFDP1Q9UEE9 299 aaPredicted RBP17.33■□□□□ 0.36
CCNK-208ENST00000557165 MYO5CQ9NQX4 1742 aa17.32■□□□□ 0.36
CCNK-208ENST00000557165 DIEXFQ68CQ4 756 aaKnown RBP17.3■□□□□ 0.36
CCNK-208ENST00000557165 ANKRD30AQ9BXX3 1397 aa17.29■□□□□ 0.36
CCNK-208ENST00000557165 MAST1Q9Y2H9 1570 aa17.29■□□□□ 0.36
CCNK-208ENST00000557165 NCOA1Q15788 1441 aa17.28■□□□□ 0.36
CCNK-208ENST00000557165 CDC42BPBQ9Y5S2 1711 aa17.27■□□□□ 0.36
CCNK-208ENST00000557165 ZCCHC11Q5TAX3 1644 aaKnown RBP17.27■□□□□ 0.36
CCNK-208ENST00000557165 KIAA1107Q9UPP5 1409 aa17.27■□□□□ 0.35
CCNK-208ENST00000557165 CCDC141Q6ZP82 1450 aa17.24■□□□□ 0.35
CCNK-208ENST00000557165 KDM5DQ9BY66 1539 aa17.24■□□□□ 0.35
CCNK-208ENST00000557165 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCNK-208ENST00000557165 PLXNC1O60486 1568 aa17.22■□□□□ 0.35
CCNK-208ENST00000557165 ERCC6L2Q5T890 1561 aa17.21■□□□□ 0.35
CCNK-208ENST00000557165 SAMD9LQ8IVG5 1584 aa17.21■□□□□ 0.35
CCNK-208ENST00000557165 TONSLQ96HA7 1378 aa17.21■□□□□ 0.35
CCNK-208ENST00000557165 DMRT2Q9Y5R5 561 aa17.21■□□□□ 0.35
CCNK-208ENST00000557165 C9orf84Q5VXU9 1444 aa17.2■□□□□ 0.34
CCNK-208ENST00000557165 MBD5Q9P267 1494 aa17.19■□□□□ 0.34
CCNK-208ENST00000557165 TTC37Q6PGP7 1564 aa17.19■□□□□ 0.34
CCNK-208ENST00000557165 ARID3CA6NKF2 412 aa17.17■□□□□ 0.34
CCNK-208ENST00000557165 TSPY4P0CV99 314 aa17.17■□□□□ 0.34
CCNK-208ENST00000557165 TSPY10P0CW01 314 aa17.17■□□□□ 0.34
CCNK-208ENST00000557165 KDM6BO15054 1643 aa17.17■□□□□ 0.34
CCNK-208ENST00000557165 ARHGAP5Q13017 1502 aa17.16■□□□□ 0.34
CCNK-208ENST00000557165 PLCH2O75038 1416 aa17.16■□□□□ 0.34
CCNK-208ENST00000557165 RRP7BPQ9NSQ0 103 aa17.16■□□□□ 0.34
CCNK-208ENST00000557165 ANKRD50Q9ULJ7 1429 aa17.15■□□□□ 0.34
CCNK-208ENST00000557165 RPRD2Q5VT52 1461 aaKnown RBP17.14■□□□□ 0.33
CCNK-208ENST00000557165 PPP1R15AO75807 674 aaPredicted RBP17.14■□□□□ 0.33
CCNK-208ENST00000557165 ABCA9Q8IUA7 1624 aa17.14■□□□□ 0.33
CCNK-208ENST00000557165 DENND4BO75064 1496 aaPredicted RBP17.12■□□□□ 0.33
CCNK-208ENST00000557165 WDR7Q9Y4E6 1490 aa17.12■□□□□ 0.33
CCNK-208ENST00000557165 MPHOSPH9Q99550 1183 aa17.12■□□□□ 0.33
CCNK-208ENST00000557165 CHIC2Q9UKJ5 165 aa17.12■□□□□ 0.33
CCNK-208ENST00000557165 ZNF644Q9H582 1327 aaPredicted RBP17.12■□□□□ 0.33
CCNK-208ENST00000557165 PPP4R3CPQ6ZMV5 832 aa17.11■□□□□ 0.33
CCNK-208ENST00000557165 ABCC1P33527 1531 aa17.11■□□□□ 0.33
CCNK-208ENST00000557165 CFAP74Q9C0B2 1584 aa17.11■□□□□ 0.33
CCNK-208ENST00000557165 ANKRD30BQ9BXX2 1392 aa17.1■□□□□ 0.33
CCNK-208ENST00000557165 UNC13BO14795 1591 aa17.1■□□□□ 0.33
CCNK-208ENST00000557165 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
CCNK-208ENST00000557165 TRIM52Q96A61 297 aa17.09■□□□□ 0.33
CCNK-208ENST00000557165 PZPP20742 1482 aa17.09■□□□□ 0.33
CCNK-208ENST00000557165 SYCP2Q9BX26 1530 aa17.09■□□□□ 0.33
CCNK-208ENST00000557165 DUOX2Q9NRD8 1548 aa17.08■□□□□ 0.32
CCNK-208ENST00000557165 RTEL1-TNFRSF6BF6WH68 1400 aa17.08■□□□□ 0.32
CCNK-208ENST00000557165 ERBINQ96RT1 1412 aa17.07■□□□□ 0.32
CCNK-208ENST00000557165 KIF15Q9NS87 1388 aa17.07■□□□□ 0.32
CCNK-208ENST00000557165 EFCAB2Q5VUJ9 269 aa17.07■□□□□ 0.32
CCNK-208ENST00000557165 ZNF777Q9ULD5 760 aaPredicted RBP17.05■□□□□ 0.32
CCNK-208ENST00000557165 NEUROD1Q13562 356 aa17.04■□□□□ 0.32
CCNK-208ENST00000557165 SIN3AQ96ST3 1273 aa17.04■□□□□ 0.32
CCNK-208ENST00000557165 ARHGEF12Q9NZN5 1544 aa17.04■□□□□ 0.32
CCNK-208ENST00000557165 SLC4A1APQ9BWU0 796 aaKnown RBP17.03■□□□□ 0.32
CCNK-208ENST00000557165 MAGI2Q86UL8 1455 aa17.03■□□□□ 0.32
CCNK-208ENST00000557165 IQGAP3Q86VI3 1631 aa17.03■□□□□ 0.32
CCNK-208ENST00000557165 TEX14Q8IWB6 1497 aa17.01■□□□□ 0.31
CCNK-208ENST00000557165 CENPBP07199 599 aaPredicted RBP17.01■□□□□ 0.31
CCNK-208ENST00000557165 EIF2AK4Q9P2K8 1649 aaKnown RBP16.99■□□□□ 0.31
CCNK-208ENST00000557165 FAM135AQ9P2D6 1515 aa16.97■□□□□ 0.31
CCNK-208ENST00000557165 POLR1AO95602 1720 aaPredicted RBP16.97■□□□□ 0.31
CCNK-208ENST00000557165 ATP10AO60312 1499 aa16.96■□□□□ 0.31
CCNK-208ENST00000557165 INO80Q9ULG1 1556 aaPredicted RBP16.96■□□□□ 0.31
CCNK-208ENST00000557165 FANCAO15360 1455 aa16.95■□□□□ 0.3
CCNK-208ENST00000557165 NUP155O75694 1391 aa16.95■□□□□ 0.3
CCNK-208ENST00000557165 ZFYVE16Q7Z3T8 1539 aa16.95■□□□□ 0.3
CCNK-208ENST00000557165 ASXL2Q76L83 1435 aa16.95■□□□□ 0.3
CCNK-208ENST00000557165 NPM1P06748 294 aaKnown RBP eCLIP16.94■□□□□ 0.3
CCNK-208ENST00000557165 HNRNPMP52272 730 aaKnown RBP eCLIP16.94■□□□□ 0.3
CCNK-208ENST00000557165 DEPDC5O75140 1603 aa16.94■□□□□ 0.3
CCNK-208ENST00000557165 UHRF1BP1Q6BDS2 1440 aa16.92■□□□□ 0.3
CCNK-208ENST00000557165 ATP7AQ04656 1500 aa16.9■□□□□ 0.3
CCNK-208ENST00000557165 ZNF518AQ6AHZ1 1483 aa16.89■□□□□ 0.29
CCNK-208ENST00000557165 NEURL4Q96JN8 1562 aa16.89■□□□□ 0.29
CCNK-208ENST00000557165 PKD2Q13563 968 aa16.88■□□□□ 0.29
CCNK-208ENST00000557165 BCORL1Q5H9F3 1711 aa16.87■□□□□ 0.29
CCNK-208ENST00000557165 ADGRL1O94910 1474 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms