RNA–Protein interactions for RNA: ENST00000557013.1

SAMD4A-211, Transcript of sterile alpha motif domain containing 4A, humanhuman

TSL 1 (best)

Gene SAMD4A, Length 3,637 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4A-211ENST00000557013 CARMIL1Q5VZK9 1371 aa11.18□□□□□ -0.62
SAMD4A-211ENST00000557013 NUP160Q12769 1436 aa11.17□□□□□ -0.62
SAMD4A-211ENST00000557013 ERCC6L2Q5T890 1561 aa11.17□□□□□ -0.62
SAMD4A-211ENST00000557013 PHLDB1Q86UU1 1377 aa11.16□□□□□ -0.62
SAMD4A-211ENST00000557013 ARID3CA6NKF2 412 aa11.15□□□□□ -0.62
SAMD4A-211ENST00000557013 HNRNPUQ00839 825 aaKnown RBP eCLIP11.15□□□□□ -0.63
SAMD4A-211ENST00000557013 TONSLQ96HA7 1378 aa11.14□□□□□ -0.63
SAMD4A-211ENST00000557013 CUL7Q14999 1698 aa11.14□□□□□ -0.63
SAMD4A-211ENST00000557013 JPH4Q96JJ6 628 aa11.14□□□□□ -0.63
SAMD4A-211ENST00000557013 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
SAMD4A-211ENST00000557013 B4GALNT3Q6L9W6 998 aa11.13□□□□□ -0.63
SAMD4A-211ENST00000557013 LRRC9Q6ZRR7 1453 aa11.12□□□□□ -0.63
SAMD4A-211ENST00000557013 PRG4Q92954 1404 aaPredicted RBP11.12□□□□□ -0.63
SAMD4A-211ENST00000557013 TIAM1Q13009 1591 aa11.11□□□□□ -0.63
SAMD4A-211ENST00000557013 KIAA0586Q9BVV6 1533 aa11.07□□□□□ -0.64
SAMD4A-211ENST00000557013 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
SAMD4A-211ENST00000557013 SHROOM2Q13796 1616 aa11.06□□□□□ -0.64
SAMD4A-211ENST00000557013 MAP3K1Q13233 1512 aa11.05□□□□□ -0.64
SAMD4A-211ENST00000557013 IPO9Q96P70 1041 aaKnown RBP11.04□□□□□ -0.64
SAMD4A-211ENST00000557013 IQGAP2Q13576 1575 aa11.03□□□□□ -0.64
SAMD4A-211ENST00000557013 FHOD3Q2V2M9 1422 aa11.03□□□□□ -0.64
SAMD4A-211ENST00000557013 ARID4BQ4LE39 1312 aaPredicted RBP11.02□□□□□ -0.64
SAMD4A-211ENST00000557013 PPP4R2Q9NY27 417 aa11.02□□□□□ -0.65
SAMD4A-211ENST00000557013 NAP1L5Q96NT1 182 aaPredicted RBP11.01□□□□□ -0.65
SAMD4A-211ENST00000557013 FAM9BQ8IZU0 186 aa11.01□□□□□ -0.65
SAMD4A-211ENST00000557013 HSP90AA2PQ14568 343 aaPredicted RBP10.99□□□□□ -0.65
SAMD4A-211ENST00000557013 HSPA5P11021 654 aaKnown RBP10.99□□□□□ -0.65
SAMD4A-211ENST00000557013 MTUS2Q5JR59 1369 aa10.99□□□□□ -0.65
SAMD4A-211ENST00000557013 CCDC18Q5T9S5 1454 aa10.99□□□□□ -0.65
SAMD4A-211ENST00000557013 PDE4CQ08493 712 aa10.98□□□□□ -0.65
SAMD4A-211ENST00000557013 ARXQ96QS3 562 aa10.98□□□□□ -0.65
SAMD4A-211ENST00000557013 CARMIL2Q6F5E8 1435 aa10.98□□□□□ -0.65
SAMD4A-211ENST00000557013 PCF11O94913 1555 aaKnown RBP10.98□□□□□ -0.65
SAMD4A-211ENST00000557013 CHIC2Q9UKJ5 165 aa10.97□□□□□ -0.65
SAMD4A-211ENST00000557013 PTPRGP23470 1445 aa10.97□□□□□ -0.65
SAMD4A-211ENST00000557013 CTTNBP2Q8WZ74 1663 aa10.97□□□□□ -0.65
SAMD4A-211ENST00000557013 CNGB1Q14028 1251 aaPredicted RBP10.97□□□□□ -0.65
SAMD4A-211ENST00000557013 RRP7BPQ9NSQ0 103 aa10.97□□□□□ -0.65
SAMD4A-211ENST00000557013 WASHC2AQ641Q2 1341 aa10.96□□□□□ -0.65
SAMD4A-211ENST00000557013 FGD6Q6ZV73 1430 aa10.96□□□□□ -0.65
SAMD4A-211ENST00000557013 EIF4G2P78344 907 aaKnown RBP eCLIP10.96□□□□□ -0.65
SAMD4A-211ENST00000557013 UACAQ9BZF9 1416 aa10.96□□□□□ -0.66
SAMD4A-211ENST00000557013 CCDC184Q52MB2 194 aa10.96□□□□□ -0.66
SAMD4A-211ENST00000557013 MRS2Q9HD23 443 aa10.96□□□□□ -0.66
SAMD4A-211ENST00000557013 RBM10P98175 930 aaKnown RBP10.95□□□□□ -0.66
SAMD4A-211ENST00000557013 DISP1Q96F81 1524 aa10.95□□□□□ -0.66
SAMD4A-211ENST00000557013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.94□□□□□ -0.66
SAMD4A-211ENST00000557013 GSE1Q14687 1217 aa10.94□□□□□ -0.66
SAMD4A-211ENST00000557013 CASKIN1Q8WXD9 1431 aa10.93□□□□□ -0.66
SAMD4A-211ENST00000557013 PTPRKQ15262 1439 aa10.93□□□□□ -0.66
SAMD4A-211ENST00000557013 FYCO1Q9BQS8 1478 aa10.92□□□□□ -0.66
SAMD4A-211ENST00000557013 ADCY10Q96PN6 1610 aa10.92□□□□□ -0.66
SAMD4A-211ENST00000557013 HFM1A2PYH4 1435 aa10.92□□□□□ -0.66
SAMD4A-211ENST00000557013 CFAP43Q8NDM7 1665 aa10.92□□□□□ -0.66
SAMD4A-211ENST00000557013 HSP90AA1P07900 732 aaKnown RBP10.92□□□□□ -0.66
SAMD4A-211ENST00000557013 KIAA0556O60303 1618 aa10.92□□□□□ -0.66
SAMD4A-211ENST00000557013 UGGT2Q9NYU1 1516 aa10.91□□□□□ -0.66
SAMD4A-211ENST00000557013 PPM1GO15355 546 aaPredicted RBP10.9□□□□□ -0.66
SAMD4A-211ENST00000557013 PLPPR3Q6T4P5 718 aa10.9□□□□□ -0.67
SAMD4A-211ENST00000557013 POLR3GLQ9BT43 218 aa10.9□□□□□ -0.67
SAMD4A-211ENST00000557013 PRKRIP1Q9H875 184 aaPredicted RBP10.9□□□□□ -0.67
SAMD4A-211ENST00000557013 NAIPQ13075 1403 aa10.89□□□□□ -0.67
SAMD4A-211ENST00000557013 FMN1Q68DA7 1419 aa10.89□□□□□ -0.67
SAMD4A-211ENST00000557013 FOXD1Q16676 465 aa10.89□□□□□ -0.67
SAMD4A-211ENST00000557013 FRAT1Q92837 279 aaPredicted RBP10.89□□□□□ -0.67
SAMD4A-211ENST00000557013 C11orf95C9JLR9 678 aaPredicted RBP10.89□□□□□ -0.67
SAMD4A-211ENST00000557013 FAM69CQ0P6D2 419 aa10.88□□□□□ -0.67
SAMD4A-211ENST00000557013 USP35Q9P2H5 1018 aa10.88□□□□□ -0.67
SAMD4A-211ENST00000557013 PLB1Q6P1J6 1458 aa10.88□□□□□ -0.67
SAMD4A-211ENST00000557013 L3MBTL2Q969R5 705 aa10.88□□□□□ -0.67
SAMD4A-211ENST00000557013 BCL11BQ9C0K0 894 aaPredicted RBP10.87□□□□□ -0.67
SAMD4A-211ENST00000557013 SENP3-EIF4A1A0A087X0R7 540 aa10.87□□□□□ -0.67
SAMD4A-211ENST00000557013 PTPN23Q9H3S7 1636 aa10.87□□□□□ -0.67
SAMD4A-211ENST00000557013 CNTLNQ9NXG0 1405 aa10.87□□□□□ -0.67
SAMD4A-211ENST00000557013 ZBED9Q6R2W3 1325 aa10.86□□□□□ -0.67
SAMD4A-211ENST00000557013 MYOM3Q5VTT5 1437 aa10.85□□□□□ -0.67
SAMD4A-211ENST00000557013 NCOA2Q15596 1464 aa10.85□□□□□ -0.67
SAMD4A-211ENST00000557013 MPHOSPH9Q99550 1183 aa10.85□□□□□ -0.67
SAMD4A-211ENST00000557013 EFCAB5A4FU69 1503 aa10.85□□□□□ -0.67
SAMD4A-211ENST00000557013 FGD1P98174 961 aa10.84□□□□□ -0.67
SAMD4A-211ENST00000557013 CCDC7Q96M83 1385 aa10.84□□□□□ -0.67
SAMD4A-211ENST00000557013 FAM43AQ8N2R8 423 aa10.84□□□□□ -0.67
SAMD4A-211ENST00000557013 ABCC2Q92887 1545 aa10.84□□□□□ -0.67
SAMD4A-211ENST00000557013 PDIA4P13667 645 aaKnown RBP10.83□□□□□ -0.68
SAMD4A-211ENST00000557013 PNNQ9H307 717 aaKnown RBP10.83□□□□□ -0.68
SAMD4A-211ENST00000557013 AAMPQ13685 434 aa10.83□□□□□ -0.68
SAMD4A-211ENST00000557013 WASHC2CQ9Y4E1 1318 aa10.83□□□□□ -0.68
SAMD4A-211ENST00000557013 TSPOAP1O95153 1857 aa10.82□□□□□ -0.68
SAMD4A-211ENST00000557013 SLC4A3P48751 1232 aa10.82□□□□□ -0.68
SAMD4A-211ENST00000557013 KIF13AQ9H1H9 1805 aa10.82□□□□□ -0.68
SAMD4A-211ENST00000557013 ASXL2Q76L83 1435 aa10.82□□□□□ -0.68
SAMD4A-211ENST00000557013 ZNF326Q5BKZ1 582 aaKnown RBP10.81□□□□□ -0.68
SAMD4A-211ENST00000557013 KDM5BQ9UGL1 1544 aa10.81□□□□□ -0.68
SAMD4A-211ENST00000557013 NBPF8Q3BBV2 869 aa10.8□□□□□ -0.68
SAMD4A-211ENST00000557013 KIF7Q2M1P5 1343 aa10.8□□□□□ -0.68
SAMD4A-211ENST00000557013 ABCC10Q5T3U5 1492 aa10.79□□□□□ -0.68
SAMD4A-211ENST00000557013 ZCCHC11Q5TAX3 1644 aaKnown RBP10.79□□□□□ -0.68
SAMD4A-211ENST00000557013 SAMD9Q5K651 1589 aa10.79□□□□□ -0.68
SAMD4A-211ENST00000557013 NFKBIBQ15653 356 aa10.79□□□□□ -0.68
SAMD4A-211ENST00000557013 ARID3AQ99856 593 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms