RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 RIMBP3Q9UFD9 1639 aa20.59■□□□□ 0.89
EFCAB11-212ENST00000556639 RRP7BPQ9NSQ0 103 aa20.59■□□□□ 0.89
EFCAB11-212ENST00000556639 ABCC5O15440 1437 aa20.58■□□□□ 0.89
EFCAB11-212ENST00000556639 CDC42BPBQ9Y5S2 1711 aa20.58■□□□□ 0.88
EFCAB11-212ENST00000556639 DAPK1P53355 1430 aa20.57■□□□□ 0.88
EFCAB11-212ENST00000556639 DHX57Q6P158 1386 aaKnown RBP20.56■□□□□ 0.88
EFCAB11-212ENST00000556639 ZEB1P37275 1124 aaPredicted RBP20.56■□□□□ 0.88
EFCAB11-212ENST00000556639 DNMT1P26358 1616 aaKnown RBP20.55■□□□□ 0.88
EFCAB11-212ENST00000556639 WDR7Q9Y4E6 1490 aa20.55■□□□□ 0.88
EFCAB11-212ENST00000556639 ASXL2Q76L83 1435 aa20.55■□□□□ 0.88
EFCAB11-212ENST00000556639 PREX2Q70Z35 1606 aa20.55■□□□□ 0.88
EFCAB11-212ENST00000556639 NAIPQ13075 1403 aa20.54■□□□□ 0.88
EFCAB11-212ENST00000556639 NPM1P06748 294 aaKnown RBP eCLIP20.54■□□□□ 0.88
EFCAB11-212ENST00000556639 HFM1A2PYH4 1435 aa20.53■□□□□ 0.88
EFCAB11-212ENST00000556639 HNRNPMP52272 730 aaKnown RBP eCLIP20.53■□□□□ 0.88
EFCAB11-212ENST00000556639 SAMD9LQ8IVG5 1584 aa20.51■□□□□ 0.87
EFCAB11-212ENST00000556639 ARHGAP5Q13017 1502 aa20.51■□□□□ 0.87
EFCAB11-212ENST00000556639 MYO5CQ9NQX4 1742 aa20.5■□□□□ 0.87
EFCAB11-212ENST00000556639 KDM6BO15054 1643 aa20.47■□□□□ 0.87
EFCAB11-212ENST00000556639 PLCH2O75038 1416 aa20.47■□□□□ 0.87
EFCAB11-212ENST00000556639 AKNAQ7Z591 1439 aa20.46■□□□□ 0.87
EFCAB11-212ENST00000556639 MBD5Q9P267 1494 aa20.45■□□□□ 0.86
EFCAB11-212ENST00000556639 CROCC2H7BZ55 1655 aa20.43■□□□□ 0.86
EFCAB11-212ENST00000556639 SYCP2Q9BX26 1530 aa20.43■□□□□ 0.86
EFCAB11-212ENST00000556639 GCC2Q8IWJ2 1684 aa20.42■□□□□ 0.86
EFCAB11-212ENST00000556639 ROCK1Q13464 1354 aa20.42■□□□□ 0.86
EFCAB11-212ENST00000556639 ABCA9Q8IUA7 1624 aa20.41■□□□□ 0.86
EFCAB11-212ENST00000556639 ARHGEF12Q9NZN5 1544 aa20.41■□□□□ 0.86
EFCAB11-212ENST00000556639 EFCAB2Q5VUJ9 269 aa20.41■□□□□ 0.86
EFCAB11-212ENST00000556639 NCOA1Q15788 1441 aa20.4■□□□□ 0.86
EFCAB11-212ENST00000556639 MAPKBP1O60336 1514 aa20.38■□□□□ 0.85
EFCAB11-212ENST00000556639 C9orf84Q5VXU9 1444 aa20.38■□□□□ 0.85
EFCAB11-212ENST00000556639 ARHGEF5Q12774 1597 aa20.38■□□□□ 0.85
EFCAB11-212ENST00000556639 TSPY4P0CV99 314 aa20.37■□□□□ 0.85
EFCAB11-212ENST00000556639 TSPY10P0CW01 314 aa20.37■□□□□ 0.85
EFCAB11-212ENST00000556639 ADGBQ8N7X0 1667 aa20.37■□□□□ 0.85
EFCAB11-212ENST00000556639 CCDC141Q6ZP82 1450 aa20.36■□□□□ 0.85
EFCAB11-212ENST00000556639 ADGRL2O95490 1459 aa20.35■□□□□ 0.85
EFCAB11-212ENST00000556639 TRIM52Q96A61 297 aa20.34■□□□□ 0.85
EFCAB11-212ENST00000556639 SHANK2Q9UPX8 1470 aa20.34■□□□□ 0.85
EFCAB11-212ENST00000556639 ANKRD30AQ9BXX3 1397 aa20.34■□□□□ 0.85
EFCAB11-212ENST00000556639 KIAA1107Q9UPP5 1409 aa20.33■□□□□ 0.85
EFCAB11-212ENST00000556639 FANCAO15360 1455 aa20.33■□□□□ 0.85
EFCAB11-212ENST00000556639 ABCC1P33527 1531 aa20.32■□□□□ 0.84
EFCAB11-212ENST00000556639 TRAPPC8Q9Y2L5 1435 aa20.32■□□□□ 0.84
EFCAB11-212ENST00000556639 CLSPNQ9HAW4 1339 aa20.32■□□□□ 0.84
EFCAB11-212ENST00000556639 ARAP3Q8WWN8 1544 aa20.32■□□□□ 0.84
EFCAB11-212ENST00000556639 PLEKHH2Q8IVE3 1493 aa20.31■□□□□ 0.84
EFCAB11-212ENST00000556639 RSPH4AQ5TD94 716 aa20.31■□□□□ 0.84
EFCAB11-212ENST00000556639 CD109Q6YHK3 1445 aa20.3■□□□□ 0.84
EFCAB11-212ENST00000556639 AFAP1Q8N556 730 aa20.3■□□□□ 0.84
EFCAB11-212ENST00000556639 SIN3AQ96ST3 1273 aa20.3■□□□□ 0.84
EFCAB11-212ENST00000556639 KIF15Q9NS87 1388 aa20.27■□□□□ 0.84
EFCAB11-212ENST00000556639 DENND4BO75064 1496 aaPredicted RBP20.27■□□□□ 0.84
EFCAB11-212ENST00000556639 ANKRD50Q9ULJ7 1429 aa20.26■□□□□ 0.83
EFCAB11-212ENST00000556639 ADGRL1O94910 1474 aa20.24■□□□□ 0.83
EFCAB11-212ENST00000556639 NEUROD1Q13562 356 aa20.24■□□□□ 0.83
EFCAB11-212ENST00000556639 SCAPERQ9BY12 1400 aa20.24■□□□□ 0.83
EFCAB11-212ENST00000556639 MPHOSPH9Q99550 1183 aa20.24■□□□□ 0.83
EFCAB11-212ENST00000556639 FOXD1Q16676 465 aa20.23■□□□□ 0.83
EFCAB11-212ENST00000556639 MAST1Q9Y2H9 1570 aa20.23■□□□□ 0.83
EFCAB11-212ENST00000556639 FAM69CQ0P6D2 419 aa20.21■□□□□ 0.83
EFCAB11-212ENST00000556639 SPAG9O60271 1321 aaKnown RBP20.19■□□□□ 0.82
EFCAB11-212ENST00000556639 DIP2BQ9P265 1576 aa20.17■□□□□ 0.82
EFCAB11-212ENST00000556639 MAP3K4Q9Y6R4 1608 aa20.17■□□□□ 0.82
EFCAB11-212ENST00000556639 PZPP20742 1482 aa20.17■□□□□ 0.82
EFCAB11-212ENST00000556639 SLC4A1APQ9BWU0 796 aaKnown RBP20.16■□□□□ 0.82
EFCAB11-212ENST00000556639 PLXNC1O60486 1568 aa20.15■□□□□ 0.82
EFCAB11-212ENST00000556639 GLI2P10070 1586 aa20.15■□□□□ 0.82
EFCAB11-212ENST00000556639 ZFYVE16Q7Z3T8 1539 aa20.15■□□□□ 0.82
EFCAB11-212ENST00000556639 MYT1LQ9UL68 1186 aa20.14■□□□□ 0.81
EFCAB11-212ENST00000556639 NUP155O75694 1391 aa20.13■□□□□ 0.81
EFCAB11-212ENST00000556639 RAPGEF3O95398 923 aa20.11■□□□□ 0.81
EFCAB11-212ENST00000556639 TSPOAP1O95153 1857 aa20.11■□□□□ 0.81
EFCAB11-212ENST00000556639 RTEL1-TNFRSF6BF6WH68 1400 aa20.11■□□□□ 0.81
EFCAB11-212ENST00000556639 CFAP74Q9C0B2 1584 aa20.11■□□□□ 0.81
EFCAB11-212ENST00000556639 ATP7AQ04656 1500 aa20.1■□□□□ 0.81
EFCAB11-212ENST00000556639 INO80Q9ULG1 1556 aaPredicted RBP20.1■□□□□ 0.81
EFCAB11-212ENST00000556639 DUOX2Q9NRD8 1548 aa20.1■□□□□ 0.81
EFCAB11-212ENST00000556639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.1■□□□□ 0.81
EFCAB11-212ENST00000556639 NEO1Q92859 1461 aa20.08■□□□□ 0.81
EFCAB11-212ENST00000556639 POGZQ7Z3K3 1410 aa20.08■□□□□ 0.81
EFCAB11-212ENST00000556639 PKD2Q13563 968 aa20.08■□□□□ 0.81
EFCAB11-212ENST00000556639 ZNF518AQ6AHZ1 1483 aa20.08■□□□□ 0.8
EFCAB11-212ENST00000556639 KIDINS220Q9ULH0 1771 aa20.07■□□□□ 0.8
EFCAB11-212ENST00000556639 ACIN1Q9UKV3 1341 aaKnown RBP20.06■□□□□ 0.8
EFCAB11-212ENST00000556639 ANKRD30BQ9BXX2 1392 aa20.06■□□□□ 0.8
EFCAB11-212ENST00000556639 PPRC1Q5VV67 1664 aaKnown RBP20.05■□□□□ 0.8
EFCAB11-212ENST00000556639 KIF13AQ9H1H9 1805 aa20.05■□□□□ 0.8
EFCAB11-212ENST00000556639 ERBINQ96RT1 1412 aa20.04■□□□□ 0.8
EFCAB11-212ENST00000556639 KDM5DQ9BY66 1539 aa20.03■□□□□ 0.8
EFCAB11-212ENST00000556639 KDM5CP41229 1560 aa20.03■□□□□ 0.8
EFCAB11-212ENST00000556639 UNC13BO14795 1591 aa20.02■□□□□ 0.8
EFCAB11-212ENST00000556639 FAM135AQ9P2D6 1515 aa20.01■□□□□ 0.79
EFCAB11-212ENST00000556639 TONSLQ96HA7 1378 aa19.99■□□□□ 0.79
EFCAB11-212ENST00000556639 RICTORQ6R327 1708 aa19.99■□□□□ 0.79
EFCAB11-212ENST00000556639 DHX29Q7Z478 1369 aaKnown RBP19.98■□□□□ 0.79
EFCAB11-212ENST00000556639 KIF3BO15066 747 aa19.98■□□□□ 0.79
EFCAB11-212ENST00000556639 MLH3Q9UHC1 1453 aa19.98■□□□□ 0.79
EFCAB11-212ENST00000556639 HECW2Q9P2P5 1572 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms