RNA–Protein interactions for RNA: ENST00000556577.1

STRN3-208, Transcript of striatin 3, humanhuman

TSL 5

Gene STRN3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-208ENST00000556577 PTPN23Q9H3S7 1636 aa11.79□□□□□ -0.52
STRN3-208ENST00000556577 FAM50AQ14320 339 aaKnown RBP11.79□□□□□ -0.52
STRN3-208ENST00000556577 KDM5BQ9UGL1 1544 aa11.79□□□□□ -0.52
STRN3-208ENST00000556577 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.78□□□□□ -0.52
STRN3-208ENST00000556577 MIA2Q96PC5 1412 aa11.77□□□□□ -0.53
STRN3-208ENST00000556577 RIMBP3CA6NJZ7 1639 aa11.75□□□□□ -0.53
STRN3-208ENST00000556577 RIMBP3BA6NNM3 1639 aa11.75□□□□□ -0.53
STRN3-208ENST00000556577 RIMBP3Q9UFD9 1639 aa11.75□□□□□ -0.53
STRN3-208ENST00000556577 CDC42BPAQ5VT25 1732 aa11.75□□□□□ -0.53
STRN3-208ENST00000556577 ATXN8OSP0DMR3 200 aa11.75□□□□□ -0.53
STRN3-208ENST00000556577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.75□□□□□ -0.536e-13■□□□□ 9.9
STRN3-208ENST00000556577 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
STRN3-208ENST00000556577 ITGAEP38570 1179 aa11.74□□□□□ -0.53
STRN3-208ENST00000556577 ABCC10Q5T3U5 1492 aa11.73□□□□□ -0.53
STRN3-208ENST00000556577 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
STRN3-208ENST00000556577 MYO5CQ9NQX4 1742 aa11.72□□□□□ -0.53
STRN3-208ENST00000556577 PREX2Q70Z35 1606 aa11.71□□□□□ -0.53
STRN3-208ENST00000556577 GPATCH8Q9UKJ3 1502 aaKnown RBP11.71□□□□□ -0.53
STRN3-208ENST00000556577 NPM1P06748 294 aaKnown RBP eCLIP11.71□□□□□ -0.53
STRN3-208ENST00000556577 TTC37Q6PGP7 1564 aa11.71□□□□□ -0.54
STRN3-208ENST00000556577 WDR7Q9Y4E6 1490 aa11.7□□□□□ -0.54
STRN3-208ENST00000556577 CFDP1Q9UEE9 299 aaPredicted RBP11.7□□□□□ -0.54
STRN3-208ENST00000556577 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.7□□□□□ -0.54
STRN3-208ENST00000556577 CAMSAP2Q08AD1 1489 aa11.7□□□□□ -0.54
STRN3-208ENST00000556577 CDC42BPBQ9Y5S2 1711 aa11.69□□□□□ -0.54
STRN3-208ENST00000556577 DNMT1P26358 1616 aaKnown RBP11.68□□□□□ -0.54
STRN3-208ENST00000556577 KCNH8Q96L42 1107 aa11.68□□□□□ -0.54
STRN3-208ENST00000556577 ASXL2Q76L83 1435 aa11.67□□□□□ -0.54
STRN3-208ENST00000556577 ARHGAP5Q13017 1502 aa11.66□□□□□ -0.54
STRN3-208ENST00000556577 HRCP23327 699 aa11.66□□□□□ -0.54
STRN3-208ENST00000556577 CCER1Q8TC90 406 aaPredicted RBP11.66□□□□□ -0.54
STRN3-208ENST00000556577 ZNF777Q9ULD5 760 aaPredicted RBP11.66□□□□□ -0.54
STRN3-208ENST00000556577 CROCC2H7BZ55 1655 aa11.65□□□□□ -0.54
STRN3-208ENST00000556577 DAPK1P53355 1430 aa11.64□□□□□ -0.55
STRN3-208ENST00000556577 SETD5Q9C0A6 1442 aa11.64□□□□□ -0.55
STRN3-208ENST00000556577 CYB5RLQ6IPT4 315 aa11.64□□□□□ -0.55
STRN3-208ENST00000556577 GCC2Q8IWJ2 1684 aa11.64□□□□□ -0.55
STRN3-208ENST00000556577 ADGBQ8N7X0 1667 aa11.64□□□□□ -0.55
STRN3-208ENST00000556577 ABCA9Q8IUA7 1624 aa11.64□□□□□ -0.55
STRN3-208ENST00000556577 ZNF644Q9H582 1327 aaPredicted RBP11.63□□□□□ -0.55
STRN3-208ENST00000556577 SAMD9LQ8IVG5 1584 aa11.62□□□□□ -0.55
STRN3-208ENST00000556577 PTPRKQ15262 1439 aa11.62□□□□□ -0.55
STRN3-208ENST00000556577 ARAP3Q8WWN8 1544 aa11.62□□□□□ -0.55
STRN3-208ENST00000556577 ZEB1P37275 1124 aaPredicted RBP11.62□□□□□ -0.55
STRN3-208ENST00000556577 PLEKHH2Q8IVE3 1493 aa11.62□□□□□ -0.55
STRN3-208ENST00000556577 ARHGEF5Q12774 1597 aa11.62□□□□□ -0.55
STRN3-208ENST00000556577 HFM1A2PYH4 1435 aa11.61□□□□□ -0.55
STRN3-208ENST00000556577 PLCH2O75038 1416 aa11.61□□□□□ -0.55
STRN3-208ENST00000556577 AKNAQ7Z591 1439 aa11.61□□□□□ -0.55
STRN3-208ENST00000556577 MAPKBP1O60336 1514 aa11.61□□□□□ -0.55
STRN3-208ENST00000556577 RAB3GAP2Q9H2M9 1393 aa11.61□□□□□ -0.55
STRN3-208ENST00000556577 ABCC5O15440 1437 aa11.6□□□□□ -0.55
STRN3-208ENST00000556577 SAMD1Q6SPF0 538 aaPredicted RBP11.6□□□□□ -0.55
STRN3-208ENST00000556577 SHANK2Q9UPX8 1470 aa11.59□□□□□ -0.55
STRN3-208ENST00000556577 CHIC2Q9UKJ5 165 aa11.59□□□□□ -0.55
STRN3-208ENST00000556577 SYCP2Q9BX26 1530 aa11.59□□□□□ -0.55
STRN3-208ENST00000556577 CCDC141Q6ZP82 1450 aa11.58□□□□□ -0.56
STRN3-208ENST00000556577 ROCK1Q13464 1354 aa11.58□□□□□ -0.56
STRN3-208ENST00000556577 EFCAB2Q5VUJ9 269 aa11.58□□□□□ -0.56
STRN3-208ENST00000556577 RNF39Q9H2S5 420 aa11.58□□□□□ -0.56
STRN3-208ENST00000556577 NAIPQ13075 1403 aa11.58□□□□□ -0.56
STRN3-208ENST00000556577 CFAP74Q9C0B2 1584 aa11.58□□□□□ -0.56
STRN3-208ENST00000556577 ABCC1P33527 1531 aa11.57□□□□□ -0.56
STRN3-208ENST00000556577 RSPH4AQ5TD94 716 aa11.56□□□□□ -0.56
STRN3-208ENST00000556577 C9orf84Q5VXU9 1444 aa11.56□□□□□ -0.56
STRN3-208ENST00000556577 RRP7BPQ9NSQ0 103 aa11.56□□□□□ -0.56
STRN3-208ENST00000556577 KIAA1107Q9UPP5 1409 aa11.56□□□□□ -0.56
STRN3-208ENST00000556577 ADGRL2O95490 1459 aa11.56□□□□□ -0.56
STRN3-208ENST00000556577 ANKRD30AQ9BXX3 1397 aa11.55□□□□□ -0.56
STRN3-208ENST00000556577 TSPY4P0CV99 314 aa11.55□□□□□ -0.56
STRN3-208ENST00000556577 TSPY10P0CW01 314 aa11.55□□□□□ -0.56
STRN3-208ENST00000556577 FANCAO15360 1455 aa11.55□□□□□ -0.56
STRN3-208ENST00000556577 MBD5Q9P267 1494 aa11.55□□□□□ -0.56
STRN3-208ENST00000556577 DHX57Q6P158 1386 aaKnown RBP11.54□□□□□ -0.56
STRN3-208ENST00000556577 HNRNPMP52272 730 aaKnown RBP eCLIP11.54□□□□□ -0.568e-7■■■■□ 26.4
STRN3-208ENST00000556577 MAST1Q9Y2H9 1570 aa11.54□□□□□ -0.56
STRN3-208ENST00000556577 CD109Q6YHK3 1445 aa11.53□□□□□ -0.56
STRN3-208ENST00000556577 ACIN1Q9UKV3 1341 aaKnown RBP11.53□□□□□ -0.56
STRN3-208ENST00000556577 GLI2P10070 1586 aa11.53□□□□□ -0.56
STRN3-208ENST00000556577 CLSPNQ9HAW4 1339 aa11.52□□□□□ -0.57
STRN3-208ENST00000556577 NCOA1Q15788 1441 aa11.52□□□□□ -0.57
STRN3-208ENST00000556577 ADGRL1O94910 1474 aa11.51□□□□□ -0.57
STRN3-208ENST00000556577 DIP2BQ9P265 1576 aa11.51□□□□□ -0.57
STRN3-208ENST00000556577 MAP3K4Q9Y6R4 1608 aa11.51□□□□□ -0.57
STRN3-208ENST00000556577 PLXNC1O60486 1568 aa11.5□□□□□ -0.57
STRN3-208ENST00000556577 KDM6BO15054 1643 aa11.5□□□□□ -0.57
STRN3-208ENST00000556577 ARHGEF12Q9NZN5 1544 aa11.5□□□□□ -0.57
STRN3-208ENST00000556577 ATF5Q9Y2D1 282 aaPredicted RBP11.49□□□□□ -0.57
STRN3-208ENST00000556577 KIF15Q9NS87 1388 aa11.49□□□□□ -0.57
STRN3-208ENST00000556577 NEO1Q92859 1461 aa11.48□□□□□ -0.57
STRN3-208ENST00000556577 SCAPERQ9BY12 1400 aa11.47□□□□□ -0.57
STRN3-208ENST00000556577 ANKRD50Q9ULJ7 1429 aa11.47□□□□□ -0.57
STRN3-208ENST00000556577 TRAPPC8Q9Y2L5 1435 aa11.47□□□□□ -0.57
STRN3-208ENST00000556577 TRIM52Q96A61 297 aa11.47□□□□□ -0.57
STRN3-208ENST00000556577 TSPOAP1O95153 1857 aa11.46□□□□□ -0.57
STRN3-208ENST00000556577 DNAJC5Q9H3Z4 198 aa11.46□□□□□ -0.57
STRN3-208ENST00000556577 ZFYVE16Q7Z3T8 1539 aa11.45□□□□□ -0.58
STRN3-208ENST00000556577 SPAG9O60271 1321 aaKnown RBP11.45□□□□□ -0.58
STRN3-208ENST00000556577 KIF13AQ9H1H9 1805 aa11.45□□□□□ -0.58
STRN3-208ENST00000556577 FAM69CQ0P6D2 419 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms