RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 PRG4Q92954 1404 aaPredicted RBP20.3■□□□□ 0.84
LRP1-211ENST00000556356 SAFB2Q14151 953 aaKnown RBP eCLIP20.3■□□□□ 0.84
LRP1-211ENST00000556356 NUDCQ9Y266 331 aa20.29■□□□□ 0.84
LRP1-211ENST00000556356 CUX1P39880 1505 aa20.28■□□□□ 0.84
LRP1-211ENST00000556356 SNAPC4Q5SXM2 1469 aa20.27■□□□□ 0.84
LRP1-211ENST00000556356 TOP2BQ02880 1626 aa20.26■□□□□ 0.83
LRP1-211ENST00000556356 MIER1Q8N108 512 aa20.23■□□□□ 0.83
LRP1-211ENST00000556356 PRDM2Q13029 1718 aa20.23■□□□□ 0.83
LRP1-211ENST00000556356 MAPK8IP3Q9UPT6 1336 aa20.22■□□□□ 0.83
LRP1-211ENST00000556356 ERICH3Q5RHP9 1530 aa20.21■□□□□ 0.83
LRP1-211ENST00000556356 TNNT2P45379 298 aaPredicted RBP20.21■□□□□ 0.83
LRP1-211ENST00000556356 RTL5Q5HYW3 569 aaPredicted RBP20.2■□□□□ 0.82
LRP1-211ENST00000556356 SYNJ2O15056 1496 aa20.2■□□□□ 0.82
LRP1-211ENST00000556356 FKBP8Q14318 412 aa20.19■□□□□ 0.82
LRP1-211ENST00000556356 ROCK2O75116 1388 aaKnown RBP20.19■□□□□ 0.82
LRP1-211ENST00000556356 CC2D1BQ5T0F9 858 aaKnown RBP20.18■□□□□ 0.82
LRP1-211ENST00000556356 HDGFL2Q7Z4V5 671 aaPredicted RBP20.18■□□□□ 0.82
LRP1-211ENST00000556356 MYOM3Q5VTT5 1437 aa20.17■□□□□ 0.82
LRP1-211ENST00000556356 CASKIN1Q8WXD9 1431 aa20.16■□□□□ 0.82
LRP1-211ENST00000556356 KIF21BO75037 1637 aa20.15■□□□□ 0.82
LRP1-211ENST00000556356 EIF3AQ14152 1382 aaKnown RBP20.15■□□□□ 0.82
LRP1-211ENST00000556356 UNC13AQ9UPW8 1703 aa20.14■□□□□ 0.82
LRP1-211ENST00000556356 HSPA5P11021 654 aaKnown RBP20.14■□□□□ 0.81
LRP1-211ENST00000556356 MYH16Q9H6N6 1097 aa20.14■□□□□ 0.81
LRP1-211ENST00000556356 PNNQ9H307 717 aaKnown RBP20.13■□□□□ 0.81
LRP1-211ENST00000556356 U2SURPO15042 1029 aaKnown RBP20.12■□□□□ 0.81
LRP1-211ENST00000556356 NUTM2DQ5VT03 806 aaPredicted RBP20.12■□□□□ 0.81
LRP1-211ENST00000556356 SOX12O15370 315 aa20.12■□□□□ 0.81
LRP1-211ENST00000556356 MORC1Q86VD1 984 aa20.12■□□□□ 0.81
LRP1-211ENST00000556356 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
LRP1-211ENST00000556356 ABCA10Q8WWZ4 1543 aa20.1■□□□□ 0.81
LRP1-211ENST00000556356 CCDC144AA2RUR9 1427 aa20.1■□□□□ 0.81
LRP1-211ENST00000556356 NEUROD2Q15784 382 aa20.1■□□□□ 0.81
LRP1-211ENST00000556356 UACAQ9BZF9 1416 aa20.08■□□□□ 0.81
LRP1-211ENST00000556356 EFCAB5A4FU69 1503 aa20.08■□□□□ 0.81
LRP1-211ENST00000556356 CCDC136Q96JN2 1154 aa20.08■□□□□ 0.81
LRP1-211ENST00000556356 PRXQ9BXM0 1461 aa20.08■□□□□ 0.8
LRP1-211ENST00000556356 PAK3O75914 559 aaPredicted RBP20.08■□□□□ 0.8
LRP1-211ENST00000556356 L3MBTL2Q969R5 705 aa20.08■□□□□ 0.8
LRP1-211ENST00000556356 ARXQ96QS3 562 aa20.08■□□□□ 0.8
LRP1-211ENST00000556356 FGD6Q6ZV73 1430 aa20.06■□□□□ 0.8
LRP1-211ENST00000556356 UPF2Q9HAU5 1272 aaKnown RBP20.06■□□□□ 0.8
LRP1-211ENST00000556356 LAS1LQ9Y4W2 734 aaKnown RBP20.05■□□□□ 0.8
LRP1-211ENST00000556356 VGFO15240 615 aaPredicted RBP20.05■□□□□ 0.8
LRP1-211ENST00000556356 ZNF644Q9H582 1327 aaPredicted RBP20.05■□□□□ 0.8
LRP1-211ENST00000556356 FYCO1Q9BQS8 1478 aa20.04■□□□□ 0.8
LRP1-211ENST00000556356 ARHGAP5Q13017 1502 aa20.04■□□□□ 0.8
LRP1-211ENST00000556356 KIAA0586Q9BVV6 1533 aa20.04■□□□□ 0.8
LRP1-211ENST00000556356 LRRC9Q6ZRR7 1453 aa20.03■□□□□ 0.8
LRP1-211ENST00000556356 KIF15Q9NS87 1388 aa20.03■□□□□ 0.8
LRP1-211ENST00000556356 ANP32AP39687 249 aaKnown RBP20.02■□□□□ 0.79
LRP1-211ENST00000556356 NCOA2Q15596 1464 aa20.01■□□□□ 0.79
LRP1-211ENST00000556356 TERF2IPQ9NYB0 399 aa20■□□□□ 0.79
LRP1-211ENST00000556356 SENP3-EIF4A1A0A087X0R7 540 aa19.99■□□□□ 0.79
LRP1-211ENST00000556356 MAGI1Q96QZ7 1491 aaPredicted RBP19.98■□□□□ 0.79
LRP1-211ENST00000556356 KTN1Q86UP2 1357 aaKnown RBP19.98■□□□□ 0.79
LRP1-211ENST00000556356 NGDNQ8NEJ9 315 aaKnown RBP19.97■□□□□ 0.79
LRP1-211ENST00000556356 ARAP1Q96P48 1450 aa19.97■□□□□ 0.79
LRP1-211ENST00000556356 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
LRP1-211ENST00000556356 AFAP1Q8N556 730 aa19.97■□□□□ 0.79
LRP1-211ENST00000556356 TRAK1Q9UPV9 953 aa19.96■□□□□ 0.79
LRP1-211ENST00000556356 CSB-PGBD3P0DP91 1061 aa19.95■□□□□ 0.78
LRP1-211ENST00000556356 PHLDB1Q86UU1 1377 aa19.95■□□□□ 0.78
LRP1-211ENST00000556356 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
LRP1-211ENST00000556356 HSP90AA1P07900 732 aaKnown RBP19.93■□□□□ 0.78
LRP1-211ENST00000556356 FTSJ3Q8IY81 847 aaKnown RBP19.93■□□□□ 0.78
LRP1-211ENST00000556356 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.93■□□□□ 0.78
LRP1-211ENST00000556356 TROQ12816 1431 aaPredicted RBP19.92■□□□□ 0.78
LRP1-211ENST00000556356 PLEKHH2Q8IVE3 1493 aa19.91■□□□□ 0.78
LRP1-211ENST00000556356 ANKRD50Q9ULJ7 1429 aa19.91■□□□□ 0.78
LRP1-211ENST00000556356 HECW1Q76N89 1606 aa19.91■□□□□ 0.78
LRP1-211ENST00000556356 GRIN2AQ12879 1464 aa19.91■□□□□ 0.78
LRP1-211ENST00000556356 IQGAP2Q13576 1575 aa19.9■□□□□ 0.78
LRP1-211ENST00000556356 RTF1Q92541 710 aaKnown RBP19.9■□□□□ 0.78
LRP1-211ENST00000556356 CUL7Q14999 1698 aa19.9■□□□□ 0.78
LRP1-211ENST00000556356 IRX6P78412 446 aaPredicted RBP19.89■□□□□ 0.78
LRP1-211ENST00000556356 NPHP1O15259 732 aa19.89■□□□□ 0.77
LRP1-211ENST00000556356 EHBP1L1Q8N3D4 1523 aa19.88■□□□□ 0.77
LRP1-211ENST00000556356 NUTM2FA1L443 756 aa19.88■□□□□ 0.77
LRP1-211ENST00000556356 DHX57Q6P158 1386 aaKnown RBP19.87■□□□□ 0.77
LRP1-211ENST00000556356 RALBP1Q15311 655 aa19.87■□□□□ 0.77
LRP1-211ENST00000556356 ZNF608Q9ULD9 1512 aaPredicted RBP19.84■□□□□ 0.77
LRP1-211ENST00000556356 U2AF1L5P0DN76 240 aaPredicted RBP19.83■□□□□ 0.77
LRP1-211ENST00000556356 MS4A1P11836 297 aa19.83■□□□□ 0.77
LRP1-211ENST00000556356 U2AF1Q01081 240 aaKnown RBP eCLIP19.83■□□□□ 0.77
LRP1-211ENST00000556356 CHMP4BQ9H444 224 aaKnown RBP19.83■□□□□ 0.77
LRP1-211ENST00000556356 CCDC9Q9Y3X0 531 aaKnown RBP19.83■□□□□ 0.77
LRP1-211ENST00000556356 STAC3Q96MF2 364 aa19.82■□□□□ 0.76
LRP1-211ENST00000556356 EVC2Q86UK5 1308 aa19.82■□□□□ 0.76
LRP1-211ENST00000556356 CCER2I3L3R5 266 aa19.82■□□□□ 0.76
LRP1-211ENST00000556356 FRAT1Q92837 279 aaPredicted RBP19.81■□□□□ 0.76
LRP1-211ENST00000556356 MIA2Q96PC5 1412 aa19.8■□□□□ 0.76
LRP1-211ENST00000556356 SCAPERQ9BY12 1400 aa19.8■□□□□ 0.76
LRP1-211ENST00000556356 ST20-MTHFSA0A0A6YYL1 179 aa19.8■□□□□ 0.76
LRP1-211ENST00000556356 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.79■□□□□ 0.76
LRP1-211ENST00000556356 AMPHP49418 695 aa19.78■□□□□ 0.76
LRP1-211ENST00000556356 MINK1Q8N4C8 1332 aaPredicted RBP19.77■□□□□ 0.76
LRP1-211ENST00000556356 CALD1Q05682 793 aaKnown RBP19.77■□□□□ 0.76
LRP1-211ENST00000556356 C9orf84Q5VXU9 1444 aa19.77■□□□□ 0.76
LRP1-211ENST00000556356 RAPGEF3O95398 923 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms