RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 ABCC5O15440 1437 aa27.56■■■□□ 2
SDR39U1-218ENST00000556262 DNMT1P26358 1616 aaKnown RBP27.55■■■□□ 2
SDR39U1-218ENST00000556262 KCNH8Q96L42 1107 aa27.55■■■□□ 2
SDR39U1-218ENST00000556262 TTC37Q6PGP7 1564 aa27.52■■■□□ 2
SDR39U1-218ENST00000556262 CLSPNQ9HAW4 1339 aa27.52■■■□□ 2
SDR39U1-218ENST00000556262 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.52■■■□□ 2
SDR39U1-218ENST00000556262 CDC42BPBQ9Y5S2 1711 aa27.48■■□□□ 1.99
SDR39U1-218ENST00000556262 PREX2Q70Z35 1606 aa27.47■■□□□ 1.99
SDR39U1-218ENST00000556262 GCC2Q8IWJ2 1684 aa27.45■■□□□ 1.99
SDR39U1-218ENST00000556262 AKNAQ7Z591 1439 aa27.45■■□□□ 1.99
SDR39U1-218ENST00000556262 MAPKBP1O60336 1514 aa27.45■■□□□ 1.98
SDR39U1-218ENST00000556262 ROCK1Q13464 1354 aa27.42■■□□□ 1.98
SDR39U1-218ENST00000556262 KDM6BO15054 1643 aa27.41■■□□□ 1.98
SDR39U1-218ENST00000556262 SAMD9LQ8IVG5 1584 aa27.39■■□□□ 1.98
SDR39U1-218ENST00000556262 MYO5CQ9NQX4 1742 aa27.39■■□□□ 1.98
SDR39U1-218ENST00000556262 CROCC2H7BZ55 1655 aa27.39■■□□□ 1.98
SDR39U1-218ENST00000556262 ARHGAP5Q13017 1502 aa27.39■■□□□ 1.97
SDR39U1-218ENST00000556262 HNRNPMP52272 730 aaKnown RBP eCLIP27.39■■□□□ 1.97
SDR39U1-218ENST00000556262 WDR7Q9Y4E6 1490 aa27.38■■□□□ 1.97
SDR39U1-218ENST00000556262 NCOA1Q15788 1441 aa27.33■■□□□ 1.97
SDR39U1-218ENST00000556262 ASXL2Q76L83 1435 aa27.33■■□□□ 1.97
SDR39U1-218ENST00000556262 MBD5Q9P267 1494 aa27.33■■□□□ 1.97
SDR39U1-218ENST00000556262 ADGBQ8N7X0 1667 aa27.33■■□□□ 1.97
SDR39U1-218ENST00000556262 PLCH2O75038 1416 aa27.32■■□□□ 1.96
SDR39U1-218ENST00000556262 NPM1P06748 294 aaKnown RBP eCLIP27.31■■□□□ 1.96
SDR39U1-218ENST00000556262 ARHGEF5Q12774 1597 aa27.3■■□□□ 1.96
SDR39U1-218ENST00000556262 ADGRL2O95490 1459 aa27.3■■□□□ 1.96
SDR39U1-218ENST00000556262 C9orf84Q5VXU9 1444 aa27.29■■□□□ 1.96
SDR39U1-218ENST00000556262 SYCP2Q9BX26 1530 aa27.28■■□□□ 1.96
SDR39U1-218ENST00000556262 TRIM52Q96A61 297 aa27.28■■□□□ 1.96
SDR39U1-218ENST00000556262 TSPY4P0CV99 314 aa27.28■■□□□ 1.96
SDR39U1-218ENST00000556262 TSPY10P0CW01 314 aa27.28■■□□□ 1.96
SDR39U1-218ENST00000556262 SHANK2Q9UPX8 1470 aa27.27■■□□□ 1.96
SDR39U1-218ENST00000556262 ANKRD30AQ9BXX3 1397 aa27.27■■□□□ 1.96
SDR39U1-218ENST00000556262 SIN3AQ96ST3 1273 aa27.26■■□□□ 1.95
SDR39U1-218ENST00000556262 CCDC141Q6ZP82 1450 aa27.25■■□□□ 1.95
SDR39U1-218ENST00000556262 EFCAB2Q5VUJ9 269 aa27.24■■□□□ 1.95
SDR39U1-218ENST00000556262 CYB5RLQ6IPT4 315 aa27.24■■□□□ 1.95
SDR39U1-218ENST00000556262 RIMBP3CA6NJZ7 1639 aa27.23■■□□□ 1.95
SDR39U1-218ENST00000556262 RIMBP3BA6NNM3 1639 aa27.23■■□□□ 1.95
SDR39U1-218ENST00000556262 RIMBP3Q9UFD9 1639 aa27.23■■□□□ 1.95
SDR39U1-218ENST00000556262 NEUROD1Q13562 356 aa27.21■■□□□ 1.95
SDR39U1-218ENST00000556262 ABCA9Q8IUA7 1624 aa27.21■■□□□ 1.95
SDR39U1-218ENST00000556262 RSPH4AQ5TD94 716 aa27.2■■□□□ 1.95
SDR39U1-218ENST00000556262 ARHGEF12Q9NZN5 1544 aa27.2■■□□□ 1.95
SDR39U1-218ENST00000556262 KIAA1107Q9UPP5 1409 aa27.2■■□□□ 1.94
SDR39U1-218ENST00000556262 PLEKHH2Q8IVE3 1493 aa27.19■■□□□ 1.94
SDR39U1-218ENST00000556262 DENND4BO75064 1496 aaPredicted RBP27.18■■□□□ 1.94
SDR39U1-218ENST00000556262 ARAP3Q8WWN8 1544 aa27.16■■□□□ 1.94
SDR39U1-218ENST00000556262 MPHOSPH9Q99550 1183 aa27.16■■□□□ 1.94
SDR39U1-218ENST00000556262 ANKRD50Q9ULJ7 1429 aa27.15■■□□□ 1.94
SDR39U1-218ENST00000556262 ABCC1P33527 1531 aa27.14■■□□□ 1.94
SDR39U1-218ENST00000556262 KIF15Q9NS87 1388 aa27.14■■□□□ 1.94
SDR39U1-218ENST00000556262 ACIN1Q9UKV3 1341 aaKnown RBP27.12■■□□□ 1.93
SDR39U1-218ENST00000556262 FANCAO15360 1455 aa27.11■■□□□ 1.93
SDR39U1-218ENST00000556262 TRAPPC8Q9Y2L5 1435 aa27.1■■□□□ 1.93
SDR39U1-218ENST00000556262 MAST1Q9Y2H9 1570 aa27.09■■□□□ 1.93
SDR39U1-218ENST00000556262 FOXD1Q16676 465 aa27.08■■□□□ 1.93
SDR39U1-218ENST00000556262 SLC4A1APQ9BWU0 796 aaKnown RBP27.06■■□□□ 1.92
SDR39U1-218ENST00000556262 PZPP20742 1482 aa27.04■■□□□ 1.92
SDR39U1-218ENST00000556262 AFAP1Q8N556 730 aa27.04■■□□□ 1.92
SDR39U1-218ENST00000556262 CD109Q6YHK3 1445 aa27.02■■□□□ 1.92
SDR39U1-218ENST00000556262 ZNF316A6NFI3 1004 aaPredicted RBP27.01■■□□□ 1.91
SDR39U1-218ENST00000556262 PLXNC1O60486 1568 aa27■■□□□ 1.91
SDR39U1-218ENST00000556262 ADGRL1O94910 1474 aa26.99■■□□□ 1.91
SDR39U1-218ENST00000556262 TIMELESSQ9UNS1 1208 aa26.98■■□□□ 1.91
SDR39U1-218ENST00000556262 SCAPERQ9BY12 1400 aa26.97■■□□□ 1.91
SDR39U1-218ENST00000556262 NUP155O75694 1391 aa26.97■■□□□ 1.91
SDR39U1-218ENST00000556262 SPAG9O60271 1321 aaKnown RBP26.97■■□□□ 1.91
SDR39U1-218ENST00000556262 TONSLQ96HA7 1378 aa26.96■■□□□ 1.91
SDR39U1-218ENST00000556262 ANKRD30BQ9BXX2 1392 aa26.94■■□□□ 1.9
SDR39U1-218ENST00000556262 ZFYVE16Q7Z3T8 1539 aa26.91■■□□□ 1.9
SDR39U1-218ENST00000556262 DUOX2Q9NRD8 1548 aa26.91■■□□□ 1.9
SDR39U1-218ENST00000556262 PKD2Q13563 968 aa26.91■■□□□ 1.9
SDR39U1-218ENST00000556262 PPP1R15AO75807 674 aaPredicted RBP26.9■■□□□ 1.9
SDR39U1-218ENST00000556262 KDM5DQ9BY66 1539 aa26.9■■□□□ 1.9
SDR39U1-218ENST00000556262 RTEL1-TNFRSF6BF6WH68 1400 aa26.89■■□□□ 1.9
SDR39U1-218ENST00000556262 CFAP74Q9C0B2 1584 aa26.86■■□□□ 1.89
SDR39U1-218ENST00000556262 ATP7AQ04656 1500 aa26.85■■□□□ 1.89
SDR39U1-218ENST00000556262 ERBINQ96RT1 1412 aa26.85■■□□□ 1.89
SDR39U1-218ENST00000556262 INO80Q9ULG1 1556 aaPredicted RBP26.85■■□□□ 1.89
SDR39U1-218ENST00000556262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.84■■□□□ 1.896e-6■□□□□ 8.3
SDR39U1-218ENST00000556262 MYT1LQ9UL68 1186 aa26.84■■□□□ 1.89
SDR39U1-218ENST00000556262 DNAJC5Q9H3Z4 198 aa26.84■■□□□ 1.89
SDR39U1-218ENST00000556262 UNC13BO14795 1591 aa26.83■■□□□ 1.88
SDR39U1-218ENST00000556262 MAP3K4Q9Y6R4 1608 aa26.82■■□□□ 1.88
SDR39U1-218ENST00000556262 FAM135AQ9P2D6 1515 aa26.82■■□□□ 1.88
SDR39U1-218ENST00000556262 RPRD2Q5VT52 1461 aaKnown RBP26.81■■□□□ 1.88
SDR39U1-218ENST00000556262 ZNF518AQ6AHZ1 1483 aa26.8■■□□□ 1.88
SDR39U1-218ENST00000556262 FAM69CQ0P6D2 419 aa26.8■■□□□ 1.88
SDR39U1-218ENST00000556262 GLI2P10070 1586 aa26.79■■□□□ 1.88
SDR39U1-218ENST00000556262 DIEXFQ68CQ4 756 aaKnown RBP26.79■■□□□ 1.88
SDR39U1-218ENST00000556262 NEO1Q92859 1461 aa26.77■■□□□ 1.88
SDR39U1-218ENST00000556262 DIP2BQ9P265 1576 aa26.77■■□□□ 1.88
SDR39U1-218ENST00000556262 POGZQ7Z3K3 1410 aa26.77■■□□□ 1.88
SDR39U1-218ENST00000556262 KIDINS220Q9ULH0 1771 aa26.76■■□□□ 1.87
SDR39U1-218ENST00000556262 L3MBTL2Q969R5 705 aa26.75■■□□□ 1.87
SDR39U1-218ENST00000556262 MAGI2Q86UL8 1455 aa26.74■■□□□ 1.87
SDR39U1-218ENST00000556262 IQGAP3Q86VI3 1631 aa26.73■■□□□ 1.87
SDR39U1-218ENST00000556262 KDM5CP41229 1560 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms