RNA–Protein interactions for RNA: ENST00000556184.5

SRSF5-212, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 2,443 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-212ENST00000556184 PRDM2Q13029 1718 aa14.47□□□□□ -0.09
SRSF5-212ENST00000556184 URB2Q14146 1524 aaKnown RBP14.47□□□□□ -0.09
SRSF5-212ENST00000556184 MRC2Q9UBG0 1479 aa14.47□□□□□ -0.09
SRSF5-212ENST00000556184 FGD6Q6ZV73 1430 aa14.47□□□□□ -0.09
SRSF5-212ENST00000556184 EFCAB5A4FU69 1503 aa14.46□□□□□ -0.09
SRSF5-212ENST00000556184 WASHC2AQ641Q2 1341 aa14.46□□□□□ -0.09
SRSF5-212ENST00000556184 KLHL34Q8N239 644 aa14.46□□□□□ -0.09
SRSF5-212ENST00000556184 PCF11O94913 1555 aaKnown RBP14.45□□□□□ -0.1
SRSF5-212ENST00000556184 CNTLNQ9NXG0 1405 aa14.45□□□□□ -0.1
SRSF5-212ENST00000556184 THOC2Q8NI27 1593 aaKnown RBP14.44□□□□□ -0.1
SRSF5-212ENST00000556184 RAD54L2Q9Y4B4 1467 aa14.44□□□□□ -0.1
SRSF5-212ENST00000556184 IRX6P78412 446 aaPredicted RBP14.43□□□□□ -0.1
SRSF5-212ENST00000556184 PTPN23Q9H3S7 1636 aa14.42□□□□□ -0.1
SRSF5-212ENST00000556184 RGL2O15211 777 aa14.42□□□□□ -0.1
SRSF5-212ENST00000556184 NAIPQ13075 1403 aa14.42□□□□□ -0.1
SRSF5-212ENST00000556184 SPDYE4A6NLX3 237 aa14.41□□□□□ -0.1
SRSF5-212ENST00000556184 EIF4G2P78344 907 aaKnown RBP eCLIP14.41□□□□□ -0.1
SRSF5-212ENST00000556184 RNF123Q5XPI4 1314 aa14.41□□□□□ -0.1
SRSF5-212ENST00000556184 HSPA5P11021 654 aaKnown RBP14.41□□□□□ -0.1
SRSF5-212ENST00000556184 PRKRIP1Q9H875 184 aaPredicted RBP14.41□□□□□ -0.1
SRSF5-212ENST00000556184 FMN1Q68DA7 1419 aa14.4□□□□□ -0.1
SRSF5-212ENST00000556184 HOXD11P31277 338 aaPredicted RBP14.39□□□□□ -0.11
SRSF5-212ENST00000556184 SPRYD3Q8NCJ5 442 aa14.39□□□□□ -0.11
SRSF5-212ENST00000556184 PTPRKQ15262 1439 aa14.39□□□□□ -0.11
SRSF5-212ENST00000556184 NCOA1Q15788 1441 aa14.39□□□□□ -0.11
SRSF5-212ENST00000556184 IPO9Q96P70 1041 aaKnown RBP14.39□□□□□ -0.11
SRSF5-212ENST00000556184 P3H3Q8IVL6 736 aa14.38□□□□□ -0.11
SRSF5-212ENST00000556184 TOPBP1Q92547 1522 aa14.38□□□□□ -0.11
SRSF5-212ENST00000556184 SMG6Q86US8 1419 aaKnown RBP14.38□□□□□ -0.11
SRSF5-212ENST00000556184 B4GALNT3Q6L9W6 998 aa14.37□□□□□ -0.11
SRSF5-212ENST00000556184 POLA1P09884 1462 aaPredicted RBP14.37□□□□□ -0.11
SRSF5-212ENST00000556184 AKNAQ7Z591 1439 aa14.36□□□□□ -0.11
SRSF5-212ENST00000556184 ECM2O94769 699 aaPredicted RBP14.36□□□□□ -0.11
SRSF5-212ENST00000556184 WDR62O43379 1518 aa14.36□□□□□ -0.11
SRSF5-212ENST00000556184 CCDC7Q96M83 1385 aa14.35□□□□□ -0.11
SRSF5-212ENST00000556184 DNMBPQ6XZF7 1577 aa14.35□□□□□ -0.11
SRSF5-212ENST00000556184 ANP32AP39687 249 aaKnown RBP14.34□□□□□ -0.11
SRSF5-212ENST00000556184 MYOM3Q5VTT5 1437 aa14.33□□□□□ -0.11
SRSF5-212ENST00000556184 PAK3O75914 559 aaPredicted RBP14.33□□□□□ -0.12
SRSF5-212ENST00000556184 FHOD3Q2V2M9 1422 aa14.32□□□□□ -0.12
SRSF5-212ENST00000556184 CCDC184Q52MB2 194 aa14.32□□□□□ -0.12
SRSF5-212ENST00000556184 MRS2Q9HD23 443 aa14.32□□□□□ -0.12
SRSF5-212ENST00000556184 SNAPC4Q5SXM2 1469 aa14.32□□□□□ -0.12
SRSF5-212ENST00000556184 USP35Q9P2H5 1018 aa14.31□□□□□ -0.12
SRSF5-212ENST00000556184 TDRD9Q8NDG6 1382 aaKnown RBP14.31□□□□□ -0.12
SRSF5-212ENST00000556184 ATP1B4Q9UN42 357 aaPredicted RBP14.31□□□□□ -0.12
SRSF5-212ENST00000556184 MTUS2Q5JR59 1369 aa14.3□□□□□ -0.12
SRSF5-212ENST00000556184 ZNF608Q9ULD9 1512 aaPredicted RBP14.3□□□□□ -0.12
SRSF5-212ENST00000556184 RTL5Q5HYW3 569 aaPredicted RBP14.3□□□□□ -0.12
SRSF5-212ENST00000556184 ZBTB47Q9UFB7 747 aaPredicted RBP14.3□□□□□ -0.12
SRSF5-212ENST00000556184 ABCA10Q8WWZ4 1543 aa14.3□□□□□ -0.12
SRSF5-212ENST00000556184 ABCA5Q8WWZ7 1642 aa14.29□□□□□ -0.12
SRSF5-212ENST00000556184 HECW1Q76N89 1606 aa14.29□□□□□ -0.12
SRSF5-212ENST00000556184 PROM2Q8N271 834 aa14.29□□□□□ -0.12
SRSF5-212ENST00000556184 NUDCQ9Y266 331 aa14.29□□□□□ -0.12
SRSF5-212ENST00000556184 TCOF1Q13428 1488 aaKnown RBP14.28□□□□□ -0.12
SRSF5-212ENST00000556184 SPATA31E1Q6ZUB1 1445 aa14.28□□□□□ -0.12
SRSF5-212ENST00000556184 FAM9BQ8IZU0 186 aa14.28□□□□□ -0.12
SRSF5-212ENST00000556184 DENND4BO75064 1496 aaPredicted RBP14.28□□□□□ -0.12
SRSF5-212ENST00000556184 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.12
SRSF5-212ENST00000556184 ARHGEF11O15085 1522 aa14.27□□□□□ -0.12
SRSF5-212ENST00000556184 DNAJC5Q9H3Z4 198 aa14.26□□□□□ -0.13
SRSF5-212ENST00000556184 C11orf95C9JLR9 678 aaPredicted RBP14.25□□□□□ -0.13
SRSF5-212ENST00000556184 CCDC136Q96JN2 1154 aa14.25□□□□□ -0.13
SRSF5-212ENST00000556184 EHBP1L1Q8N3D4 1523 aa14.24□□□□□ -0.13
SRSF5-212ENST00000556184 ARID4BQ4LE39 1312 aaPredicted RBP14.24□□□□□ -0.13
SRSF5-212ENST00000556184 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
SRSF5-212ENST00000556184 CUL7Q14999 1698 aa14.24□□□□□ -0.13
SRSF5-212ENST00000556184 L3MBTL2Q969R5 705 aa14.23□□□□□ -0.13
SRSF5-212ENST00000556184 GRIN2BQ13224 1484 aa14.23□□□□□ -0.13
SRSF5-212ENST00000556184 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
SRSF5-212ENST00000556184 UGGT2Q9NYU1 1516 aa14.22□□□□□ -0.13
SRSF5-212ENST00000556184 SUPT6HQ7KZ85 1726 aaKnown RBP14.22□□□□□ -0.13
SRSF5-212ENST00000556184 MPHOSPH9Q99550 1183 aa14.22□□□□□ -0.13
SRSF5-212ENST00000556184 MIA2Q96PC5 1412 aa14.22□□□□□ -0.13
SRSF5-212ENST00000556184 KIF7Q2M1P5 1343 aa14.21□□□□□ -0.13
SRSF5-212ENST00000556184 RPRD2Q5VT52 1461 aaKnown RBP14.21□□□□□ -0.14
SRSF5-212ENST00000556184 TCERG1O14776 1098 aaKnown RBP14.21□□□□□ -0.14
SRSF5-212ENST00000556184 SAMD9Q5K651 1589 aa14.19□□□□□ -0.14
SRSF5-212ENST00000556184 ANKRD30BQ9BXX2 1392 aa14.19□□□□□ -0.14
SRSF5-212ENST00000556184 WASHC2CQ9Y4E1 1318 aa14.19□□□□□ -0.14
SRSF5-212ENST00000556184 CHGAP10645 457 aaKnown RBP14.19□□□□□ -0.14
SRSF5-212ENST00000556184 IFT140Q96RY7 1462 aa14.19□□□□□ -0.14
SRSF5-212ENST00000556184 POLR1AO95602 1720 aaPredicted RBP14.19□□□□□ -0.14
SRSF5-212ENST00000556184 MS4A1P11836 297 aa14.19□□□□□ -0.14
SRSF5-212ENST00000556184 CTTNBP2Q8WZ74 1663 aa14.18□□□□□ -0.14
SRSF5-212ENST00000556184 DHX29Q7Z478 1369 aaKnown RBP14.18□□□□□ -0.14
SRSF5-212ENST00000556184 GAPVD1Q14C86 1478 aa14.18□□□□□ -0.14
SRSF5-212ENST00000556184 TEX14Q8IWB6 1497 aa14.17□□□□□ -0.14
SRSF5-212ENST00000556184 PPM1GO15355 546 aaPredicted RBP14.16□□□□□ -0.14
SRSF5-212ENST00000556184 ANO8Q9HCE9 1232 aaPredicted RBP14.16□□□□□ -0.14
SRSF5-212ENST00000556184 ROCK1Q13464 1354 aa14.16□□□□□ -0.14
SRSF5-212ENST00000556184 KTN1Q86UP2 1357 aaKnown RBP14.14□□□□□ -0.15
SRSF5-212ENST00000556184 NBPF8Q3BBV2 869 aa14.14□□□□□ -0.15
SRSF5-212ENST00000556184 TARBP1Q13395 1621 aaKnown RBP14.14□□□□□ -0.15
SRSF5-212ENST00000556184 PNISRQ8TF01 805 aaKnown RBP14.14□□□□□ -0.15
SRSF5-212ENST00000556184 ROCK2O75116 1388 aaKnown RBP14.13□□□□□ -0.15
SRSF5-212ENST00000556184 RRP7BPQ9NSQ0 103 aa14.13□□□□□ -0.15
SRSF5-212ENST00000556184 LRPPRCP42704 1394 aaKnown RBP14.11□□□□□ -0.15
SRSF5-212ENST00000556184 NPM2Q86SE8 214 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms