RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 LMTK3Q96Q04 1460 aa9.82□□□□□ -0.84
PRKCH-220ENST00000556164 AKNAQ7Z591 1439 aa9.81□□□□□ -0.84
PRKCH-220ENST00000556164 TTC37Q6PGP7 1564 aa9.8□□□□□ -0.84
PRKCH-220ENST00000556164 FANCAO15360 1455 aa9.8□□□□□ -0.84
PRKCH-220ENST00000556164 PLEKHD1A6NEE1 506 aa9.8□□□□□ -0.84
PRKCH-220ENST00000556164 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.8□□□□□ -0.84
PRKCH-220ENST00000556164 FER1L4A9Z1Z3 1794 aa9.8□□□□□ -0.84
PRKCH-220ENST00000556164 SIGLEC1Q9BZZ2 1709 aa9.79□□□□□ -0.84
PRKCH-220ENST00000556164 EFCAB5A4FU69 1503 aa9.78□□□□□ -0.84
PRKCH-220ENST00000556164 ZMYM4Q5VZL5 1548 aa9.78□□□□□ -0.84
PRKCH-220ENST00000556164 ZFYVE16Q7Z3T8 1539 aa9.78□□□□□ -0.84
PRKCH-220ENST00000556164 POGZQ7Z3K3 1410 aa9.78□□□□□ -0.84
PRKCH-220ENST00000556164 EEA1Q15075 1411 aa9.77□□□□□ -0.85
PRKCH-220ENST00000556164 CDK13Q14004 1512 aaKnown RBP9.77□□□□□ -0.85
PRKCH-220ENST00000556164 YEATS2Q9ULM3 1422 aa9.76□□□□□ -0.85
PRKCH-220ENST00000556164 HECW1Q76N89 1606 aa9.76□□□□□ -0.85
PRKCH-220ENST00000556164 HSPA2P54652 639 aa9.76□□□□□ -0.85
PRKCH-220ENST00000556164 MLECQ14165 292 aa9.75□□□□□ -0.85
PRKCH-220ENST00000556164 MYO5CQ9NQX4 1742 aa9.75□□□□□ -0.85
PRKCH-220ENST00000556164 MAGI2Q86UL8 1455 aa9.74□□□□□ -0.85
PRKCH-220ENST00000556164 SCAPERQ9BY12 1400 aa9.73□□□□□ -0.85
PRKCH-220ENST00000556164 PREX1Q8TCU6 1659 aa9.72□□□□□ -0.85
PRKCH-220ENST00000556164 CNKSR2Q8WXI2 1034 aa9.71□□□□□ -0.86
PRKCH-220ENST00000556164 PLCH2O75038 1416 aa9.71□□□□□ -0.86
PRKCH-220ENST00000556164 ATP1B4Q9UN42 357 aaPredicted RBP9.7□□□□□ -0.86
PRKCH-220ENST00000556164 C9orf84Q5VXU9 1444 aa9.7□□□□□ -0.86
PRKCH-220ENST00000556164 ARHGEF12Q9NZN5 1544 aa9.7□□□□□ -0.86
PRKCH-220ENST00000556164 KIF14Q15058 1648 aa9.7□□□□□ -0.86
PRKCH-220ENST00000556164 ATP10AO60312 1499 aa9.69□□□□□ -0.86
PRKCH-220ENST00000556164 FKBP8Q14318 412 aa9.69□□□□□ -0.86
PRKCH-220ENST00000556164 CERKQ8TCT0 537 aa9.68□□□□□ -0.86
PRKCH-220ENST00000556164 SETD1BQ9UPS6 1966 aaKnown RBP9.68□□□□□ -0.86
PRKCH-220ENST00000556164 ARHGAP5Q13017 1502 aa9.67□□□□□ -0.86
PRKCH-220ENST00000556164 FMN1Q68DA7 1419 aa9.67□□□□□ -0.86
PRKCH-220ENST00000556164 EFCAB2Q5VUJ9 269 aa9.67□□□□□ -0.86
PRKCH-220ENST00000556164 STRCQ7RTU9 1775 aa9.67□□□□□ -0.86
PRKCH-220ENST00000556164 LRRIQ1Q96JM4 1722 aa9.67□□□□□ -0.86
PRKCH-220ENST00000556164 ZNF518AQ6AHZ1 1483 aa9.66□□□□□ -0.86
PRKCH-220ENST00000556164 UBTFP17480 764 aaKnown RBP9.66□□□□□ -0.86
PRKCH-220ENST00000556164 BCANQ96GW7 911 aa9.66□□□□□ -0.86
PRKCH-220ENST00000556164 MYT1LQ9UL68 1186 aa9.66□□□□□ -0.86
PRKCH-220ENST00000556164 CDK11AQ9UQ88 783 aaPredicted RBP9.66□□□□□ -0.86
PRKCH-220ENST00000556164 KDM5CP41229 1560 aa9.66□□□□□ -0.86
PRKCH-220ENST00000556164 CDC42BPBQ9Y5S2 1711 aa9.65□□□□□ -0.86
PRKCH-220ENST00000556164 CEBPAP49715 358 aaPredicted RBP9.65□□□□□ -0.86
PRKCH-220ENST00000556164 PLCB2Q00722 1185 aa9.65□□□□□ -0.86
PRKCH-220ENST00000556164 PIAS4Q8N2W9 510 aaPredicted RBP9.65□□□□□ -0.86
PRKCH-220ENST00000556164 DIP2CQ9Y2E4 1556 aa9.65□□□□□ -0.86
PRKCH-220ENST00000556164 ARHGAP35Q9NRY4 1499 aa9.65□□□□□ -0.87
PRKCH-220ENST00000556164 CLIP1P30622 1438 aa9.65□□□□□ -0.87
PRKCH-220ENST00000556164 ABCA6Q8N139 1617 aa9.64□□□□□ -0.87
PRKCH-220ENST00000556164 C3P01024 1663 aa9.64□□□□□ -0.87
PRKCH-220ENST00000556164 TROQ12816 1431 aaPredicted RBP9.64□□□□□ -0.87
PRKCH-220ENST00000556164 UHRF1BP1Q6BDS2 1440 aa9.64□□□□□ -0.87
PRKCH-220ENST00000556164 AFAP1Q8N556 730 aa9.63□□□□□ -0.87
PRKCH-220ENST00000556164 ITSN2Q9NZM3 1697 aa9.62□□□□□ -0.87
PRKCH-220ENST00000556164 PREX2Q70Z35 1606 aa9.62□□□□□ -0.87
PRKCH-220ENST00000556164 REREQ9P2R6 1566 aa9.62□□□□□ -0.87
PRKCH-220ENST00000556164 DMRT2Q9Y5R5 561 aa9.61□□□□□ -0.87
PRKCH-220ENST00000556164 CDC42BPAQ5VT25 1732 aa9.6□□□□□ -0.87
PRKCH-220ENST00000556164 ABCC1P33527 1531 aa9.6□□□□□ -0.87
PRKCH-220ENST00000556164 ESF1Q9H501 851 aaKnown RBP9.59□□□□□ -0.87
PRKCH-220ENST00000556164 KIDINS220Q9ULH0 1771 aa9.59□□□□□ -0.87
PRKCH-220ENST00000556164 DISP3Q9P2K9 1392 aa9.59□□□□□ -0.87
PRKCH-220ENST00000556164 MLH3Q9UHC1 1453 aa9.59□□□□□ -0.87
PRKCH-220ENST00000556164 TRAPPC8Q9Y2L5 1435 aa9.58□□□□□ -0.88
PRKCH-220ENST00000556164 AGLP35573 1532 aa9.58□□□□□ -0.88
PRKCH-220ENST00000556164 TAOK2Q9UL54 1235 aa9.57□□□□□ -0.88
PRKCH-220ENST00000556164 CCDC18Q5T9S5 1454 aa9.57□□□□□ -0.88
PRKCH-220ENST00000556164 PTPRTO14522 1441 aa9.56□□□□□ -0.88
PRKCH-220ENST00000556164 SUPT6HQ7KZ85 1726 aaKnown RBP9.56□□□□□ -0.88
PRKCH-220ENST00000556164 SPATA31D1Q6ZQQ2 1576 aa9.56□□□□□ -0.88
PRKCH-220ENST00000556164 MROH2AA6NES4 1674 aa9.55□□□□□ -0.88
PRKCH-220ENST00000556164 ILDR2Q71H61 639 aa9.55□□□□□ -0.88
PRKCH-220ENST00000556164 CASKIN1Q8WXD9 1431 aa9.55□□□□□ -0.88
PRKCH-220ENST00000556164 CNTLNQ9NXG0 1405 aa9.55□□□□□ -0.88
PRKCH-220ENST00000556164 SAMD9LQ8IVG5 1584 aa9.54□□□□□ -0.88
PRKCH-220ENST00000556164 LTBP4Q8N2S1 1624 aa9.54□□□□□ -0.88
PRKCH-220ENST00000556164 PRKCSHP14314 528 aaPredicted RBP9.54□□□□□ -0.88
PRKCH-220ENST00000556164 NCOA1Q15788 1441 aa9.54□□□□□ -0.88
PRKCH-220ENST00000556164 CAMSAP1Q5T5Y3 1602 aa9.53□□□□□ -0.88
PRKCH-220ENST00000556164 SYCP2Q9BX26 1530 aa9.53□□□□□ -0.88
PRKCH-220ENST00000556164 CLTCQ00610 1675 aaKnown RBP9.53□□□□□ -0.88
PRKCH-220ENST00000556164 DAXXQ9UER7 740 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-220ENST00000556164 ATXN8OSP0DMR3 200 aa9.52□□□□□ -0.89
PRKCH-220ENST00000556164 ZNF777Q9ULD5 760 aaPredicted RBP9.52□□□□□ -0.89
PRKCH-220ENST00000556164 FYCO1Q9BQS8 1478 aa9.52□□□□□ -0.89
PRKCH-220ENST00000556164 NPATQ14207 1427 aa9.51□□□□□ -0.89
PRKCH-220ENST00000556164 SOCS7O14512 581 aa9.51□□□□□ -0.89
PRKCH-220ENST00000556164 MYO3AQ8NEV4 1616 aa9.51□□□□□ -0.89
PRKCH-220ENST00000556164 IQSEC2Q5JU85 1478 aa9.51□□□□□ -0.89
PRKCH-220ENST00000556164 ZNF142P52746 1687 aaPredicted RBP9.51□□□□□ -0.89
PRKCH-220ENST00000556164 ATP7AQ04656 1500 aa9.51□□□□□ -0.89
PRKCH-220ENST00000556164 SPAG9O60271 1321 aaKnown RBP9.5□□□□□ -0.89
PRKCH-220ENST00000556164 SCAF1Q9H7N4 1312 aaKnown RBP9.5□□□□□ -0.89
PRKCH-220ENST00000556164 INO80Q9ULG1 1556 aaPredicted RBP9.5□□□□□ -0.89
PRKCH-220ENST00000556164 ZMYM3Q14202 1370 aa9.5□□□□□ -0.89
PRKCH-220ENST00000556164 GPATCH8Q9UKJ3 1502 aaKnown RBP9.49□□□□□ -0.89
PRKCH-220ENST00000556164 PLXNC1O60486 1568 aa9.49□□□□□ -0.89
PRKCH-220ENST00000556164 ADGBQ8N7X0 1667 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms