RNA–Protein interactions for RNA: ENST00000555928.5

MEG3-225, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 720 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-225ENST00000555928 SCAPERQ9BY12 1400 aa28.81■■■□□ 2.2
MEG3-225ENST00000555928 MYO5CQ9NQX4 1742 aa28.8■■■□□ 2.2
MEG3-225ENST00000555928 PLCH2O75038 1416 aa28.78■■■□□ 2.2
MEG3-225ENST00000555928 PREX1Q8TCU6 1659 aa28.76■■■□□ 2.19
MEG3-225ENST00000555928 ARHGEF12Q9NZN5 1544 aa28.75■■■□□ 2.19
MEG3-225ENST00000555928 KIF14Q15058 1648 aa28.74■■■□□ 2.19
MEG3-225ENST00000555928 ATP10AO60312 1499 aa28.72■■■□□ 2.19
MEG3-225ENST00000555928 C9orf84Q5VXU9 1444 aa28.71■■■□□ 2.19
MEG3-225ENST00000555928 CERKQ8TCT0 537 aa28.71■■■□□ 2.19
MEG3-225ENST00000555928 EHMT2Q96KQ7 1210 aa28.67■■■□□ 2.18
MEG3-225ENST00000555928 ATP1B4Q9UN42 357 aaPredicted RBP28.67■■■□□ 2.18
MEG3-225ENST00000555928 LRRIQ1Q96JM4 1722 aa28.66■■■□□ 2.18
MEG3-225ENST00000555928 CEBPAP49715 358 aaPredicted RBP28.65■■■□□ 2.18
MEG3-225ENST00000555928 STRCQ7RTU9 1775 aa28.65■■■□□ 2.18
MEG3-225ENST00000555928 EFCAB2Q5VUJ9 269 aa28.63■■■□□ 2.17
MEG3-225ENST00000555928 KDM5CP41229 1560 aa28.62■■■□□ 2.17
MEG3-225ENST00000555928 FMN1Q68DA7 1419 aa28.61■■■□□ 2.17
MEG3-225ENST00000555928 ARHGAP35Q9NRY4 1499 aa28.61■■■□□ 2.17
MEG3-225ENST00000555928 ARHGAP5Q13017 1502 aa28.61■■■□□ 2.17
MEG3-225ENST00000555928 ZNF518AQ6AHZ1 1483 aa28.6■■■□□ 2.17
MEG3-225ENST00000555928 DIP2CQ9Y2E4 1556 aa28.59■■■□□ 2.17
MEG3-225ENST00000555928 CDC42BPBQ9Y5S2 1711 aa28.57■■■□□ 2.16
MEG3-225ENST00000555928 ABCA6Q8N139 1617 aa28.56■■■□□ 2.16
MEG3-225ENST00000555928 AFAP1Q8N556 730 aa28.56■■■□□ 2.16
MEG3-225ENST00000555928 UBTFP17480 764 aaKnown RBP28.55■■■□□ 2.16
MEG3-225ENST00000555928 TROQ12816 1431 aaPredicted RBP28.54■■■□□ 2.16
MEG3-225ENST00000555928 C3P01024 1663 aa28.54■■■□□ 2.16
MEG3-225ENST00000555928 CDK11AQ9UQ88 783 aaPredicted RBP28.52■■■□□ 2.16
MEG3-225ENST00000555928 UHRF1BP1Q6BDS2 1440 aa28.51■■■□□ 2.15
MEG3-225ENST00000555928 REREQ9P2R6 1566 aa28.5■■■□□ 2.15
MEG3-225ENST00000555928 SETD1BQ9UPS6 1966 aaKnown RBP28.5■■■□□ 2.15
MEG3-225ENST00000555928 MYT1LQ9UL68 1186 aa28.49■■■□□ 2.15
MEG3-225ENST00000555928 PREX2Q70Z35 1606 aa28.48■■■□□ 2.15
MEG3-225ENST00000555928 CLIP1P30622 1438 aa28.48■■■□□ 2.15
MEG3-225ENST00000555928 ITSN2Q9NZM3 1697 aa28.48■■■□□ 2.15
MEG3-225ENST00000555928 ABCC1P33527 1531 aa28.44■■■□□ 2.14
MEG3-225ENST00000555928 MLH3Q9UHC1 1453 aa28.43■■■□□ 2.14
MEG3-225ENST00000555928 DMRT2Q9Y5R5 561 aa28.42■■■□□ 2.14
MEG3-225ENST00000555928 TRAPPC8Q9Y2L5 1435 aa28.42■■■□□ 2.14
MEG3-225ENST00000555928 KIDINS220Q9ULH0 1771 aa28.4■■■□□ 2.14
MEG3-225ENST00000555928 CDC42BPAQ5VT25 1732 aa28.4■■■□□ 2.14
MEG3-225ENST00000555928 AGLP35573 1532 aa28.38■■■□□ 2.13
MEG3-225ENST00000555928 DISP3Q9P2K9 1392 aa28.38■■■□□ 2.13
MEG3-225ENST00000555928 ILDR2Q71H61 639 aa28.37■■■□□ 2.13
MEG3-225ENST00000555928 PTPRTO14522 1441 aa28.35■■■□□ 2.13
MEG3-225ENST00000555928 LTBP4Q8N2S1 1624 aa28.32■■■□□ 2.12
MEG3-225ENST00000555928 ESF1Q9H501 851 aaKnown RBP28.31■■■□□ 2.12
MEG3-225ENST00000555928 CCDC18Q5T9S5 1454 aa28.3■■■□□ 2.12
MEG3-225ENST00000555928 SPATA31D1Q6ZQQ2 1576 aa28.28■■■□□ 2.12
MEG3-225ENST00000555928 CASKIN1Q8WXD9 1431 aa28.28■■■□□ 2.12
MEG3-225ENST00000555928 SAMD9LQ8IVG5 1584 aa28.28■■■□□ 2.12
MEG3-225ENST00000555928 NCOA1Q15788 1441 aa28.26■■■□□ 2.12
MEG3-225ENST00000555928 SUPT6HQ7KZ85 1726 aaKnown RBP28.26■■■□□ 2.12
MEG3-225ENST00000555928 MROH2AA6NES4 1674 aa28.26■■■□□ 2.12
MEG3-225ENST00000555928 CNTLNQ9NXG0 1405 aa28.24■■■□□ 2.11
MEG3-225ENST00000555928 SYCP2Q9BX26 1530 aa28.23■■■□□ 2.11
MEG3-225ENST00000555928 CAMSAP1Q5T5Y3 1602 aa28.23■■■□□ 2.11
MEG3-225ENST00000555928 CLTCQ00610 1675 aaKnown RBP28.2■■■□□ 2.11
MEG3-225ENST00000555928 SOCS7O14512 581 aa28.19■■■□□ 2.1
MEG3-225ENST00000555928 ZNF777Q9ULD5 760 aaPredicted RBP28.19■■■□□ 2.1
MEG3-225ENST00000555928 CHIC1Q5VXU3 224 aa28.18■■■□□ 2.1
MEG3-225ENST00000555928 IQSEC2Q5JU85 1478 aa28.16■■■□□ 2.1
MEG3-225ENST00000555928 FYCO1Q9BQS8 1478 aa28.16■■■□□ 2.1
MEG3-225ENST00000555928 MYO3AQ8NEV4 1616 aa28.16■■■□□ 2.1
MEG3-225ENST00000555928 NPATQ14207 1427 aa28.16■■■□□ 2.1
MEG3-225ENST00000555928 ATP7AQ04656 1500 aa28.14■■■□□ 2.1
MEG3-225ENST00000555928 ZNF142P52746 1687 aaPredicted RBP28.14■■■□□ 2.1
MEG3-225ENST00000555928 INO80Q9ULG1 1556 aaPredicted RBP28.14■■■□□ 2.1
MEG3-225ENST00000555928 GPATCH8Q9UKJ3 1502 aaKnown RBP28.13■■■□□ 2.09
MEG3-225ENST00000555928 ZMYM3Q14202 1370 aa28.13■■■□□ 2.09
MEG3-225ENST00000555928 PLXNC1O60486 1568 aa28.12■■■□□ 2.09
MEG3-225ENST00000555928 HNRNPMP52272 730 aaKnown RBP eCLIP28.11■■■□□ 2.09
MEG3-225ENST00000555928 SPAG9O60271 1321 aaKnown RBP28.11■■■□□ 2.09
MEG3-225ENST00000555928 NCKAP5LQ9HCH0 1330 aa28.1■■■□□ 2.09
MEG3-225ENST00000555928 ZNF335Q9H4Z2 1342 aaPredicted RBP28.07■■■□□ 2.08
MEG3-225ENST00000555928 CEP170BQ9Y4F5 1589 aaPredicted RBP28.07■■■□□ 2.08
MEG3-225ENST00000555928 A2MP01023 1474 aa28.05■■■□□ 2.08
MEG3-225ENST00000555928 PTPRKQ15262 1439 aa28.03■■■□□ 2.08
MEG3-225ENST00000555928 ADGBQ8N7X0 1667 aa28.02■■■□□ 2.08
MEG3-225ENST00000555928 KIAA1107Q9UPP5 1409 aa28.01■■■□□ 2.08
MEG3-225ENST00000555928 PLA2R1Q13018 1463 aa28.01■■■□□ 2.07
MEG3-225ENST00000555928 TCOF1Q13428 1488 aaKnown RBP28■■■□□ 2.07
MEG3-225ENST00000555928 PLEKHH2Q8IVE3 1493 aa28■■■□□ 2.07
MEG3-225ENST00000555928 CFDP1Q9UEE9 299 aaPredicted RBP27.99■■■□□ 2.07
MEG3-225ENST00000555928 GGT6Q6P531 493 aa27.98■■■□□ 2.07
MEG3-225ENST00000555928 CCNB3Q8WWL7 1395 aa27.98■■■□□ 2.07
MEG3-225ENST00000555928 UBAP1LF5GYI3 381 aa27.96■■■□□ 2.07
MEG3-225ENST00000555928 PKD2Q13563 968 aa27.93■■■□□ 2.06
MEG3-225ENST00000555928 TIAM1Q13009 1591 aa27.93■■■□□ 2.06
MEG3-225ENST00000555928 DNMT1P26358 1616 aaKnown RBP27.92■■■□□ 2.06
MEG3-225ENST00000555928 ZNF644Q9H582 1327 aaPredicted RBP27.91■■■□□ 2.06
MEG3-225ENST00000555928 POLR1AO95602 1720 aaPredicted RBP27.9■■■□□ 2.06
MEG3-225ENST00000555928 MTUS2Q5JR59 1369 aa27.89■■■□□ 2.06
MEG3-225ENST00000555928 A2ML1A8K2U0 1454 aa27.89■■■□□ 2.05
MEG3-225ENST00000555928 PPP6R1Q9UPN7 881 aa27.86■■■□□ 2.05
MEG3-225ENST00000555928 MBD5Q9P267 1494 aa27.86■■■□□ 2.05
MEG3-225ENST00000555928 NEURL4Q96JN8 1562 aa27.85■■■□□ 2.05
MEG3-225ENST00000555928 EHBP1L1Q8N3D4 1523 aa27.82■■■□□ 2.04
MEG3-225ENST00000555928 RTEL1-TNFRSF6BF6WH68 1400 aa27.78■■■□□ 2.04
MEG3-225ENST00000555928 DHX29Q7Z478 1369 aaKnown RBP27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms