RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 C3P01024 1663 aa21.21■□□□□ 0.99
ABCD4-222ENST00000555617 DENND4BO75064 1496 aaPredicted RBP21.21■□□□□ 0.99
ABCD4-222ENST00000555617 POTEAQ6S8J7 498 aa21.21■□□□□ 0.99
ABCD4-222ENST00000555617 EFCAB5A4FU69 1503 aa21.19■□□□□ 0.98
ABCD4-222ENST00000555617 CAMSAP1Q5T5Y3 1602 aa21.19■□□□□ 0.98
ABCD4-222ENST00000555617 ARID3CA6NKF2 412 aa21.17■□□□□ 0.98
ABCD4-222ENST00000555617 CARMIL1Q5VZK9 1371 aa21.15■□□□□ 0.98
ABCD4-222ENST00000555617 HECW1Q76N89 1606 aa21.15■□□□□ 0.98
ABCD4-222ENST00000555617 NCKAP5LQ9HCH0 1330 aa21.14■□□□□ 0.97
ABCD4-222ENST00000555617 SENP3Q9H4L4 574 aaPredicted RBP21.14■□□□□ 0.97
ABCD4-222ENST00000555617 ATP10BO94823 1461 aa21.09■□□□□ 0.97
ABCD4-222ENST00000555617 KIF27Q86VH2 1401 aa21.05■□□□□ 0.96
ABCD4-222ENST00000555617 TOM1O60784 492 aa21.05■□□□□ 0.96
ABCD4-222ENST00000555617 MAGI2Q86UL8 1455 aa21.03■□□□□ 0.96
ABCD4-222ENST00000555617 UPF1Q92900 1129 aaKnown RBP eCLIP21.01■□□□□ 0.95
ABCD4-222ENST00000555617 C9orf84Q5VXU9 1444 aa21■□□□□ 0.95
ABCD4-222ENST00000555617 TRAPPC8Q9Y2L5 1435 aa21■□□□□ 0.95
ABCD4-222ENST00000555617 ATP10AO60312 1499 aa21■□□□□ 0.95
ABCD4-222ENST00000555617 TCOF1Q13428 1488 aaKnown RBP20.95■□□□□ 0.94
ABCD4-222ENST00000555617 CFAP74Q9C0B2 1584 aa20.93■□□□□ 0.94
ABCD4-222ENST00000555617 SUPT6HQ7KZ85 1726 aaKnown RBP20.9■□□□□ 0.94
ABCD4-222ENST00000555617 CPS1P31327 1500 aa20.9■□□□□ 0.94
ABCD4-222ENST00000555617 PLA2R1Q13018 1463 aa20.88■□□□□ 0.93
ABCD4-222ENST00000555617 RAPGEF2Q9Y4G8 1499 aa20.88■□□□□ 0.93
ABCD4-222ENST00000555617 ZNF142P52746 1687 aaPredicted RBP20.87■□□□□ 0.93
ABCD4-222ENST00000555617 PPP6R1Q9UPN7 881 aa20.86■□□□□ 0.93
ABCD4-222ENST00000555617 PTPRKQ15262 1439 aa20.86■□□□□ 0.93
ABCD4-222ENST00000555617 SHANK2Q9UPX8 1470 aa20.83■□□□□ 0.93
ABCD4-222ENST00000555617 MYO3AQ8NEV4 1616 aa20.83■□□□□ 0.93
ABCD4-222ENST00000555617 PKD2Q13563 968 aa20.83■□□□□ 0.93
ABCD4-222ENST00000555617 CTTNBP2Q8WZ74 1663 aa20.82■□□□□ 0.92
ABCD4-222ENST00000555617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.81■□□□□ 0.92
ABCD4-222ENST00000555617 SCAPERQ9BY12 1400 aa20.79■□□□□ 0.92
ABCD4-222ENST00000555617 GOLGA3Q08378 1498 aa20.79■□□□□ 0.92
ABCD4-222ENST00000555617 VWDEQ8N2E2 1590 aa20.79■□□□□ 0.92
ABCD4-222ENST00000555617 NEURL4Q96JN8 1562 aa20.79■□□□□ 0.92
ABCD4-222ENST00000555617 DIP2CQ9Y2E4 1556 aa20.78■□□□□ 0.92
ABCD4-222ENST00000555617 CEP170BQ9Y4F5 1589 aaPredicted RBP20.77■□□□□ 0.92
ABCD4-222ENST00000555617 STRCP1A6NGW2 1772 aa20.75■□□□□ 0.91
ABCD4-222ENST00000555617 NPATQ14207 1427 aa20.74■□□□□ 0.91
ABCD4-222ENST00000555617 POLR1AO95602 1720 aaPredicted RBP20.73■□□□□ 0.91
ABCD4-222ENST00000555617 ABCA6Q8N139 1617 aa20.72■□□□□ 0.91
ABCD4-222ENST00000555617 REREQ9P2R6 1566 aa20.72■□□□□ 0.91
ABCD4-222ENST00000555617 RNF17Q9BXT8 1623 aaKnown RBP20.71■□□□□ 0.91
ABCD4-222ENST00000555617 AGLP35573 1532 aa20.7■□□□□ 0.9
ABCD4-222ENST00000555617 RAPGEF6Q8TEU7 1601 aa20.69■□□□□ 0.9
ABCD4-222ENST00000555617 MROH2AA6NES4 1674 aa20.69■□□□□ 0.9
ABCD4-222ENST00000555617 SETBP1Q9Y6X0 1596 aa20.68■□□□□ 0.9
ABCD4-222ENST00000555617 LRRC7Q96NW7 1537 aa20.68■□□□□ 0.9
ABCD4-222ENST00000555617 KDM5CP41229 1560 aa20.65■□□□□ 0.9
ABCD4-222ENST00000555617 NUP153P49790 1475 aaKnown RBP20.64■□□□□ 0.89
ABCD4-222ENST00000555617 TRIM52Q96A61 297 aa20.64■□□□□ 0.89
ABCD4-222ENST00000555617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.63■□□□□ 0.89
ABCD4-222ENST00000555617 HNRNPUL2Q1KMD3 747 aaKnown RBP20.63■□□□□ 0.89
ABCD4-222ENST00000555617 CNTLNQ9NXG0 1405 aa20.61■□□□□ 0.89
ABCD4-222ENST00000555617 DNMT1P26358 1616 aaKnown RBP20.61■□□□□ 0.89
ABCD4-222ENST00000555617 P3H3Q8IVL6 736 aa20.61■□□□□ 0.89
ABCD4-222ENST00000555617 ESF1Q9H501 851 aaKnown RBP20.59■□□□□ 0.89
ABCD4-222ENST00000555617 IFFO2Q5TF58 517 aa20.58■□□□□ 0.89
ABCD4-222ENST00000555617 ZMYM3Q14202 1370 aa20.58■□□□□ 0.88
ABCD4-222ENST00000555617 XIRP1Q702N8 1843 aaKnown RBP20.55■□□□□ 0.88
ABCD4-222ENST00000555617 CLTCQ00610 1675 aaKnown RBP20.55■□□□□ 0.88
ABCD4-222ENST00000555617 AFAP1Q8N556 730 aa20.55■□□□□ 0.88
ABCD4-222ENST00000555617 ZNF518AQ6AHZ1 1483 aa20.53■□□□□ 0.88
ABCD4-222ENST00000555617 PLCH2O75038 1416 aa20.53■□□□□ 0.88
ABCD4-222ENST00000555617 SYNMO15061 1565 aa20.51■□□□□ 0.87
ABCD4-222ENST00000555617 A2ML1A8K2U0 1454 aa20.49■□□□□ 0.87
ABCD4-222ENST00000555617 LRP6O75581 1613 aa20.45■□□□□ 0.87
ABCD4-222ENST00000555617 PLEKHD1A6NEE1 506 aa20.45■□□□□ 0.86
ABCD4-222ENST00000555617 MYO5CQ9NQX4 1742 aa20.44■□□□□ 0.86
ABCD4-222ENST00000555617 ROBO1Q9Y6N7 1651 aa20.43■□□□□ 0.86
ABCD4-222ENST00000555617 MLH3Q9UHC1 1453 aa20.43■□□□□ 0.86
ABCD4-222ENST00000555617 KIDINS220Q9ULH0 1771 aa20.42■□□□□ 0.86
ABCD4-222ENST00000555617 FAM135BQ49AJ0 1406 aa20.42■□□□□ 0.86
ABCD4-222ENST00000555617 RBM33Q96EV2 1170 aaKnown RBP20.41■□□□□ 0.86
ABCD4-222ENST00000555617 MYT1LQ9UL68 1186 aa20.41■□□□□ 0.86
ABCD4-222ENST00000555617 SAMD9Q5K651 1589 aa20.41■□□□□ 0.86
ABCD4-222ENST00000555617 IQGAP1P46940 1657 aa20.4■□□□□ 0.86
ABCD4-222ENST00000555617 NPHP4O75161 1426 aaPredicted RBP20.39■□□□□ 0.85
ABCD4-222ENST00000555617 ITSN2Q9NZM3 1697 aa20.38■□□□□ 0.85
ABCD4-222ENST00000555617 MED14O60244 1454 aa20.37■□□□□ 0.85
ABCD4-222ENST00000555617 CDK12Q9NYV4 1490 aaPredicted RBP20.36■□□□□ 0.85
ABCD4-222ENST00000555617 DEPDC5O75140 1603 aa20.35■□□□□ 0.85
ABCD4-222ENST00000555617 CDK13Q14004 1512 aaKnown RBP20.35■□□□□ 0.85
ABCD4-222ENST00000555617 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.34■□□□□ 0.85
ABCD4-222ENST00000555617 ZRANB1Q9UGI0 708 aa20.34■□□□□ 0.85
ABCD4-222ENST00000555617 EFCAB2Q5VUJ9 269 aa20.33■□□□□ 0.85
ABCD4-222ENST00000555617 ABCC1P33527 1531 aa20.32■□□□□ 0.84
ABCD4-222ENST00000555617 RGS12O14924 1447 aa20.32■□□□□ 0.84
ABCD4-222ENST00000555617 PHLPP1O60346 1717 aa20.31■□□□□ 0.84
ABCD4-222ENST00000555617 ZC3H13Q5T200 1668 aaKnown RBP20.3■□□□□ 0.84
ABCD4-222ENST00000555617 RXRBP28702 533 aa20.3■□□□□ 0.84
ABCD4-222ENST00000555617 LRP5O75197 1615 aa20.29■□□□□ 0.84
ABCD4-222ENST00000555617 KIF14Q15058 1648 aa20.29■□□□□ 0.84
ABCD4-222ENST00000555617 ZNF772Q68DY9 489 aaPredicted RBP20.28■□□□□ 0.84
ABCD4-222ENST00000555617 ANKLE2Q86XL3 938 aa20.26■□□□□ 0.83
ABCD4-222ENST00000555617 ARHGAP5Q13017 1502 aa20.26■□□□□ 0.83
ABCD4-222ENST00000555617 JCADQ9P266 1359 aa20.25■□□□□ 0.83
ABCD4-222ENST00000555617 FAM9AQ8IZU1 332 aaPredicted RBP20.25■□□□□ 0.83
ABCD4-222ENST00000555617 COL16A1Q07092 1604 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms