RNA–Protein interactions for RNA: ENST00000555604.1

PRKCH-217, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-217ENST00000555604 PLEKHH2Q8IVE3 1493 aa10.23□□□□□ -0.77
PRKCH-217ENST00000555604 RSPH4AQ5TD94 716 aa10.23□□□□□ -0.77
PRKCH-217ENST00000555604 MYO5CQ9NQX4 1742 aa10.23□□□□□ -0.77
PRKCH-217ENST00000555604 MIA2Q96PC5 1412 aa10.23□□□□□ -0.77
PRKCH-217ENST00000555604 KIAA1107Q9UPP5 1409 aa10.23□□□□□ -0.77
PRKCH-217ENST00000555604 ARHGAP5Q13017 1502 aa10.23□□□□□ -0.77
PRKCH-217ENST00000555604 TSPOAP1O95153 1857 aa10.21□□□□□ -0.77
PRKCH-217ENST00000555604 DENND4BO75064 1496 aaPredicted RBP10.21□□□□□ -0.78
PRKCH-217ENST00000555604 KDM6BO15054 1643 aa10.21□□□□□ -0.78
PRKCH-217ENST00000555604 PREX2Q70Z35 1606 aa10.21□□□□□ -0.78
PRKCH-217ENST00000555604 ADGRL1O94910 1474 aa10.2□□□□□ -0.78
PRKCH-217ENST00000555604 ITSN2Q9NZM3 1697 aa10.19□□□□□ -0.78
PRKCH-217ENST00000555604 MYOM3Q5VTT5 1437 aa10.19□□□□□ -0.78
PRKCH-217ENST00000555604 SCAPERQ9BY12 1400 aa10.19□□□□□ -0.78
PRKCH-217ENST00000555604 ZNF518AQ6AHZ1 1483 aa10.18□□□□□ -0.78
PRKCH-217ENST00000555604 MAGI2Q86UL8 1455 aa10.18□□□□□ -0.78
PRKCH-217ENST00000555604 COL17A1Q9UMD9 1497 aaPredicted RBP10.17□□□□□ -0.78
PRKCH-217ENST00000555604 POGZQ7Z3K3 1410 aa10.17□□□□□ -0.78
PRKCH-217ENST00000555604 CDC42BPAQ5VT25 1732 aa10.17□□□□□ -0.78
PRKCH-217ENST00000555604 CDC42BPBQ9Y5S2 1711 aa10.17□□□□□ -0.78
PRKCH-217ENST00000555604 ZNF777Q9ULD5 760 aaPredicted RBP10.17□□□□□ -0.78
PRKCH-217ENST00000555604 RAPGEF3O95398 923 aa10.16□□□□□ -0.78
PRKCH-217ENST00000555604 ABCC1P33527 1531 aa10.16□□□□□ -0.78
PRKCH-217ENST00000555604 ZMYM4Q5VZL5 1548 aa10.14□□□□□ -0.79
PRKCH-217ENST00000555604 FGD6Q6ZV73 1430 aa10.14□□□□□ -0.79
PRKCH-217ENST00000555604 SAMD9LQ8IVG5 1584 aa10.14□□□□□ -0.79
PRKCH-217ENST00000555604 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.14□□□□□ -0.79
PRKCH-217ENST00000555604 MBD5Q9P267 1494 aa10.13□□□□□ -0.79
PRKCH-217ENST00000555604 MLH3Q9UHC1 1453 aa10.13□□□□□ -0.79
PRKCH-217ENST00000555604 TSPY4P0CV99 314 aa10.13□□□□□ -0.79
PRKCH-217ENST00000555604 TSPY10P0CW01 314 aa10.13□□□□□ -0.79
PRKCH-217ENST00000555604 HNRNPMP52272 730 aaKnown RBP eCLIP10.13□□□□□ -0.79
PRKCH-217ENST00000555604 AFAP1Q8N556 730 aa10.13□□□□□ -0.79
PRKCH-217ENST00000555604 CAMSAP2Q08AD1 1489 aa10.12□□□□□ -0.79
PRKCH-217ENST00000555604 TCOF1Q13428 1488 aaKnown RBP10.12□□□□□ -0.79
PRKCH-217ENST00000555604 RTEL1-TNFRSF6BF6WH68 1400 aa10.12□□□□□ -0.79
PRKCH-217ENST00000555604 KDM5CP41229 1560 aa10.12□□□□□ -0.79
PRKCH-217ENST00000555604 SPAG9O60271 1321 aaKnown RBP10.11□□□□□ -0.79
PRKCH-217ENST00000555604 ZNF644Q9H582 1327 aaPredicted RBP10.11□□□□□ -0.79
PRKCH-217ENST00000555604 RICTORQ6R327 1708 aa10.11□□□□□ -0.79
PRKCH-217ENST00000555604 TRAPPC8Q9Y2L5 1435 aa10.11□□□□□ -0.79
PRKCH-217ENST00000555604 SYCP2Q9BX26 1530 aa10.11□□□□□ -0.79
PRKCH-217ENST00000555604 ARHGEF12Q9NZN5 1544 aa10.11□□□□□ -0.79
PRKCH-217ENST00000555604 CCDC141Q6ZP82 1450 aa10.1□□□□□ -0.79
PRKCH-217ENST00000555604 ARHGEF5Q12774 1597 aa10.1□□□□□ -0.79
PRKCH-217ENST00000555604 FRMPD1Q5SYB0 1578 aa10.1□□□□□ -0.79
PRKCH-217ENST00000555604 MYT1LQ9UL68 1186 aa10.09□□□□□ -0.79
PRKCH-217ENST00000555604 ZFYVE16Q7Z3T8 1539 aa10.08□□□□□ -0.8
PRKCH-217ENST00000555604 PTPN23Q9H3S7 1636 aa10.08□□□□□ -0.8
PRKCH-217ENST00000555604 ATP10AO60312 1499 aa10.08□□□□□ -0.8
PRKCH-217ENST00000555604 HECW2Q9P2P5 1572 aa10.08□□□□□ -0.8
PRKCH-217ENST00000555604 RRBP1Q9P2E9 1410 aaKnown RBP10.07□□□□□ -0.8
PRKCH-217ENST00000555604 SHANK2Q9UPX8 1470 aa10.07□□□□□ -0.8
PRKCH-217ENST00000555604 AEBP2Q6ZN18 517 aaPredicted RBP10.07□□□□□ -0.8
PRKCH-217ENST00000555604 ARHGEF40Q8TER5 1519 aa10.07□□□□□ -0.8
PRKCH-217ENST00000555604 C9orf84Q5VXU9 1444 aa10.07□□□□□ -0.8
PRKCH-217ENST00000555604 REREQ9P2R6 1566 aa10.05□□□□□ -0.8
PRKCH-217ENST00000555604 FAM50AQ14320 339 aaKnown RBP10.05□□□□□ -0.8
PRKCH-217ENST00000555604 PPARGC1BQ86YN6 1023 aaKnown RBP10.05□□□□□ -0.8
PRKCH-217ENST00000555604 ATP7AQ04656 1500 aa10.05□□□□□ -0.8
PRKCH-217ENST00000555604 ABCC5O15440 1437 aa10.05□□□□□ -0.8
PRKCH-217ENST00000555604 DAPK1P53355 1430 aa10.05□□□□□ -0.8
PRKCH-217ENST00000555604 MAST1Q9Y2H9 1570 aa10.05□□□□□ -0.8
PRKCH-217ENST00000555604 PPP6R1Q9UPN7 881 aa10.04□□□□□ -0.8
PRKCH-217ENST00000555604 YEATS2Q9ULM3 1422 aa10.04□□□□□ -0.8
PRKCH-217ENST00000555604 ANKRD30AQ9BXX3 1397 aa10.03□□□□□ -0.8
PRKCH-217ENST00000555604 AGLP35573 1532 aa10.03□□□□□ -0.8
PRKCH-217ENST00000555604 INO80Q9ULG1 1556 aaPredicted RBP10.03□□□□□ -0.8
PRKCH-217ENST00000555604 DNMT1P26358 1616 aaKnown RBP10.03□□□□□ -0.8
PRKCH-217ENST00000555604 ROCK1Q13464 1354 aa10.02□□□□□ -0.8
PRKCH-217ENST00000555604 DHX29Q7Z478 1369 aaKnown RBP10.02□□□□□ -0.8
PRKCH-217ENST00000555604 A2MP01023 1474 aa10.02□□□□□ -0.81
PRKCH-217ENST00000555604 ARID4BQ4LE39 1312 aaPredicted RBP10.02□□□□□ -0.81
PRKCH-217ENST00000555604 DIP2CQ9Y2E4 1556 aa10.01□□□□□ -0.81
PRKCH-217ENST00000555604 KIDINS220Q9ULH0 1771 aa10.01□□□□□ -0.81
PRKCH-217ENST00000555604 NCOA1Q15788 1441 aa10□□□□□ -0.81
PRKCH-217ENST00000555604 ADGRL2O95490 1459 aa10□□□□□ -0.81
PRKCH-217ENST00000555604 ACIN1Q9UKV3 1341 aaKnown RBP10□□□□□ -0.81
PRKCH-217ENST00000555604 PLXNC1O60486 1568 aa10□□□□□ -0.81
PRKCH-217ENST00000555604 ADGBQ8N7X0 1667 aa9.99□□□□□ -0.81
PRKCH-217ENST00000555604 DUOX2Q9NRD8 1548 aa9.99□□□□□ -0.81
PRKCH-217ENST00000555604 ABCA6Q8N139 1617 aa9.99□□□□□ -0.81
PRKCH-217ENST00000555604 KIF15Q9NS87 1388 aa9.99□□□□□ -0.81
PRKCH-217ENST00000555604 ERBINQ96RT1 1412 aa9.99□□□□□ -0.81
PRKCH-217ENST00000555604 CROCC2H7BZ55 1655 aa9.97□□□□□ -0.81
PRKCH-217ENST00000555604 RRP7BPQ9NSQ0 103 aa9.97□□□□□ -0.81
PRKCH-217ENST00000555604 FAM135AQ9P2D6 1515 aa9.97□□□□□ -0.81
PRKCH-217ENST00000555604 ESF1Q9H501 851 aaKnown RBP9.96□□□□□ -0.82
PRKCH-217ENST00000555604 CHIC2Q9UKJ5 165 aa9.96□□□□□ -0.82
PRKCH-217ENST00000555604 CNTLNQ9NXG0 1405 aa9.96□□□□□ -0.82
PRKCH-217ENST00000555604 KIF3BO15066 747 aa9.95□□□□□ -0.82
PRKCH-217ENST00000555604 BCORL1Q5H9F3 1711 aa9.94□□□□□ -0.82
PRKCH-217ENST00000555604 EIF2AK4Q9P2K8 1649 aaKnown RBP9.94□□□□□ -0.82
PRKCH-217ENST00000555604 PTPRKQ15262 1439 aa9.94□□□□□ -0.82
PRKCH-217ENST00000555604 ANKRD50Q9ULJ7 1429 aa9.94□□□□□ -0.82
PRKCH-217ENST00000555604 KDM4FA0A1W2PPD8 638 aa9.94□□□□□ -0.82
PRKCH-217ENST00000555604 ITGAEP38570 1179 aa9.93□□□□□ -0.82
PRKCH-217ENST00000555604 GGT6Q6P531 493 aa9.92□□□□□ -0.82
PRKCH-217ENST00000555604 ADAMTSL3P82987 1691 aa9.92□□□□□ -0.82
PRKCH-217ENST00000555604 HFM1A2PYH4 1435 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms