RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 FKBP8Q14318 412 aa21.97■■□□□ 1.11
PPP4R3A-205ENST00000554684 TIMELESSQ9UNS1 1208 aa21.95■■□□□ 1.11
PPP4R3A-205ENST00000554684 KANK1Q14678 1352 aa21.95■■□□□ 1.1
PPP4R3A-205ENST00000554684 LRRC9Q6ZRR7 1453 aa21.94■■□□□ 1.1
PPP4R3A-205ENST00000554684 POGKQ9P215 609 aa21.92■■□□□ 1.1
PPP4R3A-205ENST00000554684 TNNT2P45379 298 aaPredicted RBP21.9■■□□□ 1.1
PPP4R3A-205ENST00000554684 L3MBTL2Q969R5 705 aa21.89■■□□□ 1.09
PPP4R3A-205ENST00000554684 LMOD2Q6P5Q4 547 aa21.88■■□□□ 1.09
PPP4R3A-205ENST00000554684 PPM1GO15355 546 aaPredicted RBP21.87■■□□□ 1.09
PPP4R3A-205ENST00000554684 RAPGEF3O95398 923 aa21.87■■□□□ 1.09
PPP4R3A-205ENST00000554684 CASKIN1Q8WXD9 1431 aa21.87■■□□□ 1.09
PPP4R3A-205ENST00000554684 NEFMP07197 916 aa21.86■■□□□ 1.09
PPP4R3A-205ENST00000554684 HSPA5P11021 654 aaKnown RBP21.85■■□□□ 1.09
PPP4R3A-205ENST00000554684 FGD6Q6ZV73 1430 aa21.85■■□□□ 1.09
PPP4R3A-205ENST00000554684 RSPH4AQ5TD94 716 aa21.84■■□□□ 1.09
PPP4R3A-205ENST00000554684 PLB1Q6P1J6 1458 aa21.84■■□□□ 1.09
PPP4R3A-205ENST00000554684 KIAA0586Q9BVV6 1533 aa21.83■■□□□ 1.08
PPP4R3A-205ENST00000554684 SOX12O15370 315 aa21.82■■□□□ 1.08
PPP4R3A-205ENST00000554684 SYNJ2O15056 1496 aa21.82■■□□□ 1.08
PPP4R3A-205ENST00000554684 GRIN2AQ12879 1464 aa21.82■■□□□ 1.08
PPP4R3A-205ENST00000554684 NCOA2Q15596 1464 aa21.8■■□□□ 1.08
PPP4R3A-205ENST00000554684 IRX6P78412 446 aaPredicted RBP21.8■■□□□ 1.08
PPP4R3A-205ENST00000554684 CDK13Q14004 1512 aaKnown RBP21.79■■□□□ 1.08
PPP4R3A-205ENST00000554684 NUTM2FA1L443 756 aa21.78■■□□□ 1.08
PPP4R3A-205ENST00000554684 MYOM3Q5VTT5 1437 aa21.78■■□□□ 1.08
PPP4R3A-205ENST00000554684 A0A0G2JS52 829 aa21.77■■□□□ 1.07
PPP4R3A-205ENST00000554684 CC2D1BQ5T0F9 858 aaKnown RBP21.76■■□□□ 1.07
PPP4R3A-205ENST00000554684 BIVM-ERCC5R4GMW8 1640 aa21.75■■□□□ 1.07
PPP4R3A-205ENST00000554684 RRBP1Q9P2E9 1410 aaKnown RBP21.75■■□□□ 1.07
PPP4R3A-205ENST00000554684 FYCO1Q9BQS8 1478 aa21.74■■□□□ 1.07
PPP4R3A-205ENST00000554684 SRPK2P78362 688 aaKnown RBP21.73■■□□□ 1.07
PPP4R3A-205ENST00000554684 CANXP27824 592 aaKnown RBP21.72■■□□□ 1.07
PPP4R3A-205ENST00000554684 KIF15Q9NS87 1388 aa21.72■■□□□ 1.07
PPP4R3A-205ENST00000554684 KNSTRNQ9Y448 316 aa21.71■■□□□ 1.07
PPP4R3A-205ENST00000554684 IQGAP2Q13576 1575 aa21.69■■□□□ 1.06
PPP4R3A-205ENST00000554684 MAGI1Q96QZ7 1491 aaPredicted RBP21.69■■□□□ 1.06
PPP4R3A-205ENST00000554684 WDR43Q15061 677 aaKnown RBP eCLIP21.69■■□□□ 1.06
PPP4R3A-205ENST00000554684 KIF21AQ7Z4S6 1674 aa21.69■■□□□ 1.06
PPP4R3A-205ENST00000554684 EFCAB5A4FU69 1503 aa21.67■■□□□ 1.06
PPP4R3A-205ENST00000554684 TRAK1Q9UPV9 953 aa21.67■■□□□ 1.06
PPP4R3A-205ENST00000554684 UACAQ9BZF9 1416 aa21.67■■□□□ 1.06
PPP4R3A-205ENST00000554684 NEUROD2Q15784 382 aa21.66■■□□□ 1.06
PPP4R3A-205ENST00000554684 TIAM1Q13009 1591 aa21.66■■□□□ 1.06
PPP4R3A-205ENST00000554684 ARHGAP5Q13017 1502 aa21.66■■□□□ 1.06
PPP4R3A-205ENST00000554684 SCAPERQ9BY12 1400 aa21.65■■□□□ 1.06
PPP4R3A-205ENST00000554684 HAP1P54257 671 aaPredicted RBP21.65■■□□□ 1.06
PPP4R3A-205ENST00000554684 DAXXQ9UER7 740 aaPredicted RBP21.64■■□□□ 1.06
PPP4R3A-205ENST00000554684 TROQ12816 1431 aaPredicted RBP21.62■■□□□ 1.05
PPP4R3A-205ENST00000554684 ROCK2O75116 1388 aaKnown RBP21.62■■□□□ 1.05
PPP4R3A-205ENST00000554684 EPRSP07814 1512 aaKnown RBP21.61■■□□□ 1.05
PPP4R3A-205ENST00000554684 TMF1P82094 1093 aa21.6■■□□□ 1.05
PPP4R3A-205ENST00000554684 ARHGEF11O15085 1522 aa21.59■■□□□ 1.05
PPP4R3A-205ENST00000554684 ANKRD50Q9ULJ7 1429 aa21.59■■□□□ 1.05
PPP4R3A-205ENST00000554684 HDGFP51858 240 aaKnown RBP21.58■■□□□ 1.05
PPP4R3A-205ENST00000554684 SUPT16HQ9Y5B9 1047 aaKnown RBP21.58■■□□□ 1.04
PPP4R3A-205ENST00000554684 CDCA8Q53HL2 280 aa21.57■■□□□ 1.04
PPP4R3A-205ENST00000554684 CCDC144AA2RUR9 1427 aa21.56■■□□□ 1.04
PPP4R3A-205ENST00000554684 ST20-MTHFSA0A0A6YYL1 179 aa21.56■■□□□ 1.04
PPP4R3A-205ENST00000554684 PCF11O94913 1555 aaKnown RBP21.55■■□□□ 1.04
PPP4R3A-205ENST00000554684 PAK3O75914 559 aaPredicted RBP21.51■■□□□ 1.03
PPP4R3A-205ENST00000554684 CUL7Q14999 1698 aa21.51■■□□□ 1.03
PPP4R3A-205ENST00000554684 CCER2I3L3R5 266 aa21.51■■□□□ 1.03
PPP4R3A-205ENST00000554684 EID1Q9Y6B2 187 aa21.51■■□□□ 1.03
PPP4R3A-205ENST00000554684 U2SURPO15042 1029 aaKnown RBP21.49■■□□□ 1.03
PPP4R3A-205ENST00000554684 TMEM132EQ6IEE7 984 aa21.48■■□□□ 1.03
PPP4R3A-205ENST00000554684 CCDC136Q96JN2 1154 aa21.48■■□□□ 1.03
PPP4R3A-205ENST00000554684 EHBP1L1Q8N3D4 1523 aa21.44■■□□□ 1.02
PPP4R3A-205ENST00000554684 C9orf84Q5VXU9 1444 aa21.44■■□□□ 1.02
PPP4R3A-205ENST00000554684 CD109Q6YHK3 1445 aa21.43■■□□□ 1.02
PPP4R3A-205ENST00000554684 MINK1Q8N4C8 1332 aaPredicted RBP21.42■■□□□ 1.02
PPP4R3A-205ENST00000554684 HECW1Q76N89 1606 aa21.41■■□□□ 1.02
PPP4R3A-205ENST00000554684 EIF4G3O43432 1585 aaKnown RBP21.41■■□□□ 1.02
PPP4R3A-205ENST00000554684 HFM1A2PYH4 1435 aa21.4■■□□□ 1.02
PPP4R3A-205ENST00000554684 LAS1LQ9Y4W2 734 aaKnown RBP21.4■■□□□ 1.02
PPP4R3A-205ENST00000554684 MORC1Q86VD1 984 aa21.39■■□□□ 1.01
PPP4R3A-205ENST00000554684 MIA2Q96PC5 1412 aa21.38■■□□□ 1.01
PPP4R3A-205ENST00000554684 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.38■■□□□ 1.012e-6■■■□□ 14.9
PPP4R3A-205ENST00000554684 CFAP53Q96M91 514 aa21.38■■□□□ 1.01
PPP4R3A-205ENST00000554684 VGFO15240 615 aaPredicted RBP21.38■■□□□ 1.01
PPP4R3A-205ENST00000554684 CFAP70Q5T0N1 1121 aa21.36■■□□□ 1.01
PPP4R3A-205ENST00000554684 NAIPQ13075 1403 aa21.36■■□□□ 1.01
PPP4R3A-205ENST00000554684 WDR62O43379 1518 aa21.36■■□□□ 1.01
PPP4R3A-205ENST00000554684 NPM2Q86SE8 214 aaKnown RBP21.36■■□□□ 1.01
PPP4R3A-205ENST00000554684 CEBPAP49715 358 aaPredicted RBP21.35■■□□□ 1.01
PPP4R3A-205ENST00000554684 ZBTB47Q9UFB7 747 aaPredicted RBP21.35■■□□□ 1.01
PPP4R3A-205ENST00000554684 NBPF1Q3BBV0 1214 aa21.34■■□□□ 1.01
PPP4R3A-205ENST00000554684 ATP10BO94823 1461 aa21.33■■□□□ 1.01
PPP4R3A-205ENST00000554684 THOC2Q8NI27 1593 aaKnown RBP21.32■■□□□ 1
PPP4R3A-205ENST00000554684 DAPK1P53355 1430 aa21.32■■□□□ 1
PPP4R3A-205ENST00000554684 USP47Q96K76 1375 aa21.32■■□□□ 1
PPP4R3A-205ENST00000554684 MAP3K1Q13233 1512 aa21.32■■□□□ 1
PPP4R3A-205ENST00000554684 NGDNQ8NEJ9 315 aaKnown RBP21.32■■□□□ 1
PPP4R3A-205ENST00000554684 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.31■■□□□ 1
PPP4R3A-205ENST00000554684 SUPT6HQ7KZ85 1726 aaKnown RBP21.31■■□□□ 1
PPP4R3A-205ENST00000554684 ARXQ96QS3 562 aa21.3■■□□□ 1
PPP4R3A-205ENST00000554684 HDGFL2Q7Z4V5 671 aaPredicted RBP21.28■■□□□ 1
PPP4R3A-205ENST00000554684 NBPF8Q3BBV2 869 aa21.28■■□□□ 1
PPP4R3A-205ENST00000554684 FBXO31Q5XUX0 539 aaPredicted RBP21.28■■□□□ 1
PPP4R3A-205ENST00000554684 SLC26A8Q96RN1 970 aa21.28■■□□□ 1
PPP4R3A-205ENST00000554684 ADAMTS12P58397 1594 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms