RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 BCL11BQ9C0K0 894 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-229ENST00000554672 PHF8Q9UPP1 1060 aa9.62□□□□□ -0.87
ATXN3-229ENST00000554672 NESP48681 1621 aa9.6□□□□□ -0.87
ATXN3-229ENST00000554672 STK24Q9Y6E0 443 aa9.58□□□□□ -0.88
ATXN3-229ENST00000554672 FBXO22Q8NEZ5 403 aa9.57□□□□□ -0.88
ATXN3-229ENST00000554672 SMARCA2P51531 1590 aa9.56□□□□□ -0.88
ATXN3-229ENST00000554672 STK25O00506 426 aa9.56□□□□□ -0.88
ATXN3-229ENST00000554672 SNPHO15079 494 aa9.56□□□□□ -0.88
ATXN3-229ENST00000554672 TAOK2Q9UL54 1235 aa9.56□□□□□ -0.88
ATXN3-229ENST00000554672 TMEM92Q6UXU6 159 aa9.55□□□□□ -0.88
ATXN3-229ENST00000554672 MICALL2Q8IY33 904 aa9.55□□□□□ -0.88
ATXN3-229ENST00000554672 MFRPQ9BY79 579 aa9.55□□□□□ -0.88
ATXN3-229ENST00000554672 HMGXB3Q12766 1538 aa9.55□□□□□ -0.88
ATXN3-229ENST00000554672 G3V3G9 751 aa9.54□□□□□ -0.88
ATXN3-229ENST00000554672 PCDH10Q9P2E7 1040 aa9.54□□□□□ -0.88
ATXN3-229ENST00000554672 PDS5BQ9NTI5 1447 aa9.53□□□□□ -0.88
ATXN3-229ENST00000554672 HOXB3P14651 431 aaPredicted RBP9.52□□□□□ -0.89
ATXN3-229ENST00000554672 NLRP6P59044 892 aa9.52□□□□□ -0.89
ATXN3-229ENST00000554672 BAZ1BQ9UIG0 1483 aaKnown RBP9.52□□□□□ -0.89
ATXN3-229ENST00000554672 MARVELD3Q96A59 401 aa9.51□□□□□ -0.89
ATXN3-229ENST00000554672 CDAN1Q8IWY9 1227 aa9.49□□□□□ -0.89
ATXN3-229ENST00000554672 THOC2Q8NI27 1593 aaKnown RBP9.47□□□□□ -0.89
ATXN3-229ENST00000554672 LAMC3Q9Y6N6 1575 aa9.47□□□□□ -0.89
ATXN3-229ENST00000554672 SMARCA4P51532 1647 aa9.47□□□□□ -0.89
ATXN3-229ENST00000554672 CADPSQ9ULU8 1353 aa9.46□□□□□ -0.9
ATXN3-229ENST00000554672 POTEB3A0JP26 581 aa9.44□□□□□ -0.9
ATXN3-229ENST00000554672 POTEBQ6S5H4 581 aa9.44□□□□□ -0.9
ATXN3-229ENST00000554672 BAZ1AQ9NRL2 1556 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-229ENST00000554672 PPP1R37O75864 691 aa9.41□□□□□ -0.9
ATXN3-229ENST00000554672 HS6ST3Q8IZP7 471 aa9.41□□□□□ -0.9
ATXN3-229ENST00000554672 PEG3Q9GZU2 1588 aa9.41□□□□□ -0.9
ATXN3-229ENST00000554672 EMP3P54852 163 aa9.4□□□□□ -0.9
ATXN3-229ENST00000554672 MRC2Q9UBG0 1479 aa9.4□□□□□ -0.91
ATXN3-229ENST00000554672 HOXB1P14653 301 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-229ENST00000554672 DOK7Q18PE1 504 aa9.39□□□□□ -0.91
ATXN3-229ENST00000554672 FAM205CA6NFA0 338 aa9.37□□□□□ -0.91
ATXN3-229ENST00000554672 KIF3CO14782 793 aa9.37□□□□□ -0.91
ATXN3-229ENST00000554672 CHGAP10645 457 aaKnown RBP9.37□□□□□ -0.91
ATXN3-229ENST00000554672 ZNF710Q8N1W2 664 aa9.36□□□□□ -0.91
ATXN3-229ENST00000554672 HS3ST6Q96QI5 342 aa9.36□□□□□ -0.91
ATXN3-229ENST00000554672 NKX1-1Q15270 411 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-229ENST00000554672 MROH2BQ7Z745 1585 aa9.35□□□□□ -0.91
ATXN3-229ENST00000554672 WDR62O43379 1518 aa9.35□□□□□ -0.91
ATXN3-229ENST00000554672 C2orf72A6NCS6 295 aa9.34□□□□□ -0.91
ATXN3-229ENST00000554672 GPR153Q6NV75 609 aa9.34□□□□□ -0.91
ATXN3-229ENST00000554672 KIF21AQ7Z4S6 1674 aa9.34□□□□□ -0.91
ATXN3-229ENST00000554672 KRTAP3-3Q9BYR6 98 aa9.31□□□□□ -0.92
ATXN3-229ENST00000554672 KRTAP3-2Q9BYR7 98 aa9.31□□□□□ -0.92
ATXN3-229ENST00000554672 ZSWIM6Q9HCJ5 1215 aa9.31□□□□□ -0.92
ATXN3-229ENST00000554672 CEP164Q9UPV0 1460 aa9.3□□□□□ -0.92
ATXN3-229ENST00000554672 RIMBP2O15034 1052 aa9.3□□□□□ -0.92
ATXN3-229ENST00000554672 FANCD2Q9BXW9 1451 aa9.28□□□□□ -0.92
ATXN3-229ENST00000554672 ARSIQ5FYB1 569 aa9.28□□□□□ -0.92
ATXN3-229ENST00000554672 KHSRPQ92945 711 aaKnown RBP eCLIP9.28□□□□□ -0.92
ATXN3-229ENST00000554672 SPNS2Q8IVW8 549 aa9.27□□□□□ -0.93
ATXN3-229ENST00000554672 ERBB3P21860 1342 aa9.27□□□□□ -0.93
ATXN3-229ENST00000554672 CYB5RLQ6IPT4 315 aa9.26□□□□□ -0.93
ATXN3-229ENST00000554672 CFTRP13569 1480 aa9.25□□□□□ -0.93
ATXN3-229ENST00000554672 VARS2Q5ST30 1063 aaKnown RBP9.24□□□□□ -0.93
ATXN3-229ENST00000554672 TMC2Q8TDI7 906 aa9.24□□□□□ -0.93
ATXN3-229ENST00000554672 SLC34A2O95436 690 aa9.22□□□□□ -0.93
ATXN3-229ENST00000554672 MMRN1Q13201 1228 aa9.21□□□□□ -0.94
ATXN3-229ENST00000554672 URB2Q14146 1524 aaKnown RBP9.21□□□□□ -0.94
ATXN3-229ENST00000554672 GTPBP6O43824 516 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-229ENST00000554672 GPHNQ9NQX3 736 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-229ENST00000554672 PCDHGA4Q9Y5G9 962 aa9.19□□□□□ -0.94
ATXN3-229ENST00000554672 FOXK1P85037 733 aa9.18□□□□□ -0.94
ATXN3-229ENST00000554672 DSG2Q14126 1118 aa9.18□□□□□ -0.94
ATXN3-229ENST00000554672 ZNF687Q8N1G0 1237 aa9.18□□□□□ -0.94
ATXN3-229ENST00000554672 RIMBP3CA6NJZ7 1639 aa9.17□□□□□ -0.94
ATXN3-229ENST00000554672 RIMBP3BA6NNM3 1639 aa9.17□□□□□ -0.94
ATXN3-229ENST00000554672 RIMBP3Q9UFD9 1639 aa9.17□□□□□ -0.94
ATXN3-229ENST00000554672 ARHGEF11O15085 1522 aa9.17□□□□□ -0.94
ATXN3-229ENST00000554672 ZNF316A6NFI3 1004 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-229ENST00000554672 NUDT7P0C024 238 aa9.17□□□□□ -0.94
ATXN3-229ENST00000554672 IFT140Q96RY7 1462 aa9.16□□□□□ -0.94
ATXN3-229ENST00000554672 KDM4FA0A1W2PPD8 638 aa9.16□□□□□ -0.94
ATXN3-229ENST00000554672 PLPP6Q8IY26 295 aa9.16□□□□□ -0.94
ATXN3-229ENST00000554672 WIZO95785 1651 aa9.16□□□□□ -0.94
ATXN3-229ENST00000554672 RYDENQ9NUL5 291 aaKnown RBP9.15□□□□□ -0.94
ATXN3-229ENST00000554672 ZNF608Q9ULD9 1512 aaPredicted RBP9.15□□□□□ -0.95
ATXN3-229ENST00000554672 PTCD2Q8WV60 388 aaKnown RBP9.14□□□□□ -0.95
ATXN3-229ENST00000554672 CRISPLD2Q9H0B8 497 aa9.14□□□□□ -0.95
ATXN3-229ENST00000554672 LHX6Q9UPM6 363 aa9.13□□□□□ -0.95
ATXN3-229ENST00000554672 RSF1Q96T23 1441 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-229ENST00000554672 NCKAP5LQ9HCH0 1330 aa9.12□□□□□ -0.95
ATXN3-229ENST00000554672 POTEEQ6S8J3 1075 aa9.11□□□□□ -0.95
ATXN3-229ENST00000554672 AQRO60306 1485 aaKnown RBP eCLIP9.08□□□□□ -0.96
ATXN3-229ENST00000554672 ABCC8Q09428 1581 aa9.07□□□□□ -0.96
ATXN3-229ENST00000554672 TOP2AP11388 1531 aaKnown RBP9.07□□□□□ -0.96
ATXN3-229ENST00000554672 ARAP1Q96P48 1450 aa9.07□□□□□ -0.96
ATXN3-229ENST00000554672 TOPBP1Q92547 1522 aa9.06□□□□□ -0.96
ATXN3-229ENST00000554672 PPP1R15BQ5SWA1 713 aa9.05□□□□□ -0.96
ATXN3-229ENST00000554672 OXER1Q8TDS5 423 aa9.05□□□□□ -0.96
ATXN3-229ENST00000554672 PDE4AP27815 886 aa9.04□□□□□ -0.96
ATXN3-229ENST00000554672 CADPS2Q86UW7 1296 aa9.04□□□□□ -0.96
ATXN3-229ENST00000554672 CHMP7Q8WUX9 453 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-229ENST00000554672 RTN4Q9NQC3 1192 aaKnown RBP9.04□□□□□ -0.96
ATXN3-229ENST00000554672 AXIN2Q9Y2T1 843 aa9.04□□□□□ -0.96
ATXN3-229ENST00000554672 CCDC88BA6NC98 1476 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms