RNA–Protein interactions for RNA: ENST00000554620.5

PSMA6-207, Transcript of proteasome subunit alpha 6, humanhuman

TSL 5

Gene PSMA6, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-207ENST00000554620 CEBPAP49715 358 aaPredicted RBP14□□□□□ -0.17
PSMA6-207ENST00000554620 SCAF1Q9H7N4 1312 aaKnown RBP13.99□□□□□ -0.17
PSMA6-207ENST00000554620 SUPT5HO00267 1087 aaKnown RBP13.99□□□□□ -0.17
PSMA6-207ENST00000554620 MLECQ14165 292 aa13.99□□□□□ -0.17
PSMA6-207ENST00000554620 MAGI2Q86UL8 1455 aa13.99□□□□□ -0.17
PSMA6-207ENST00000554620 PIP4K2BP78356 416 aa13.97□□□□□ -0.17
PSMA6-207ENST00000554620 C3P01024 1663 aa13.96□□□□□ -0.17
PSMA6-207ENST00000554620 CAMSAP1Q5T5Y3 1602 aa13.96□□□□□ -0.17
PSMA6-207ENST00000554620 CFAP74Q9C0B2 1584 aa13.95□□□□□ -0.18
PSMA6-207ENST00000554620 ALKQ9UM73 1620 aa13.93□□□□□ -0.18
PSMA6-207ENST00000554620 TOM1O60784 492 aa13.93□□□□□ -0.18
PSMA6-207ENST00000554620 KIF27Q86VH2 1401 aa13.92□□□□□ -0.18
PSMA6-207ENST00000554620 HECW1Q76N89 1606 aa13.91□□□□□ -0.18
PSMA6-207ENST00000554620 CARMIL1Q5VZK9 1371 aa13.9□□□□□ -0.18
PSMA6-207ENST00000554620 C9orf84Q5VXU9 1444 aa13.89□□□□□ -0.19
PSMA6-207ENST00000554620 CPS1P31327 1500 aa13.88□□□□□ -0.19
PSMA6-207ENST00000554620 TRAPPC8Q9Y2L5 1435 aa13.88□□□□□ -0.19
PSMA6-207ENST00000554620 POTEAQ6S8J7 498 aa13.87□□□□□ -0.19
PSMA6-207ENST00000554620 ATP10AO60312 1499 aa13.86□□□□□ -0.19
PSMA6-207ENST00000554620 PLA2R1Q13018 1463 aa13.86□□□□□ -0.19
PSMA6-207ENST00000554620 PTPRKQ15262 1439 aa13.85□□□□□ -0.19
PSMA6-207ENST00000554620 ATP10BO94823 1461 aa13.85□□□□□ -0.19
PSMA6-207ENST00000554620 TCOF1Q13428 1488 aaKnown RBP13.85□□□□□ -0.19
PSMA6-207ENST00000554620 ZNF142P52746 1687 aaPredicted RBP13.83□□□□□ -0.2
PSMA6-207ENST00000554620 FOXD1Q16676 465 aa13.82□□□□□ -0.2
PSMA6-207ENST00000554620 NCKAP5LQ9HCH0 1330 aa13.82□□□□□ -0.2
PSMA6-207ENST00000554620 GOLGA3Q08378 1498 aa13.8□□□□□ -0.2
PSMA6-207ENST00000554620 UPF1Q92900 1129 aaKnown RBP eCLIP13.8□□□□□ -0.2
PSMA6-207ENST00000554620 RAPGEF2Q9Y4G8 1499 aa13.8□□□□□ -0.2
PSMA6-207ENST00000554620 SUPT6HQ7KZ85 1726 aaKnown RBP13.78□□□□□ -0.2
PSMA6-207ENST00000554620 PKD2Q13563 968 aa13.78□□□□□ -0.2
PSMA6-207ENST00000554620 NPATQ14207 1427 aa13.77□□□□□ -0.21
PSMA6-207ENST00000554620 REREQ9P2R6 1566 aa13.77□□□□□ -0.21
PSMA6-207ENST00000554620 MYO3AQ8NEV4 1616 aa13.76□□□□□ -0.21
PSMA6-207ENST00000554620 SHANK2Q9UPX8 1470 aa13.75□□□□□ -0.21
PSMA6-207ENST00000554620 PPP6R1Q9UPN7 881 aa13.75□□□□□ -0.21
PSMA6-207ENST00000554620 CTTNBP2Q8WZ74 1663 aa13.75□□□□□ -0.21
PSMA6-207ENST00000554620 RNF17Q9BXT8 1623 aaKnown RBP13.74□□□□□ -0.21
PSMA6-207ENST00000554620 AGLP35573 1532 aa13.74□□□□□ -0.21
PSMA6-207ENST00000554620 MROH2AA6NES4 1674 aa13.73□□□□□ -0.21
PSMA6-207ENST00000554620 CEP170BQ9Y4F5 1589 aaPredicted RBP13.73□□□□□ -0.21
PSMA6-207ENST00000554620 ARID3CA6NKF2 412 aa13.72□□□□□ -0.21
PSMA6-207ENST00000554620 CNTLNQ9NXG0 1405 aa13.71□□□□□ -0.22
PSMA6-207ENST00000554620 POLR1AO95602 1720 aaPredicted RBP13.7□□□□□ -0.22
PSMA6-207ENST00000554620 DIP2CQ9Y2E4 1556 aa13.7□□□□□ -0.22
PSMA6-207ENST00000554620 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.69□□□□□ -0.229e-11■■■■■ 40.7
PSMA6-207ENST00000554620 VWDEQ8N2E2 1590 aa13.69□□□□□ -0.22
PSMA6-207ENST00000554620 NEURL4Q96JN8 1562 aa13.68□□□□□ -0.22
PSMA6-207ENST00000554620 SCAPERQ9BY12 1400 aa13.67□□□□□ -0.22
PSMA6-207ENST00000554620 KDM5CP41229 1560 aa13.66□□□□□ -0.22
PSMA6-207ENST00000554620 SYNMO15061 1565 aa13.65□□□□□ -0.22
PSMA6-207ENST00000554620 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
PSMA6-207ENST00000554620 RAPGEF6Q8TEU7 1601 aa13.64□□□□□ -0.23
PSMA6-207ENST00000554620 ABCA6Q8N139 1617 aa13.64□□□□□ -0.23
PSMA6-207ENST00000554620 ESF1Q9H501 851 aaKnown RBP13.63□□□□□ -0.23
PSMA6-207ENST00000554620 ZNF518AQ6AHZ1 1483 aa13.61□□□□□ -0.23
PSMA6-207ENST00000554620 IFFO2Q5TF58 517 aa13.61□□□□□ -0.23
PSMA6-207ENST00000554620 DNMT1P26358 1616 aaKnown RBP13.58□□□□□ -0.24
PSMA6-207ENST00000554620 NUP153P49790 1475 aaKnown RBP13.58□□□□□ -0.24
PSMA6-207ENST00000554620 STRCP1A6NGW2 1772 aa13.57□□□□□ -0.24
PSMA6-207ENST00000554620 SETBP1Q9Y6X0 1596 aa13.56□□□□□ -0.24
PSMA6-207ENST00000554620 ZMYM3Q14202 1370 aa13.54□□□□□ -0.24
PSMA6-207ENST00000554620 PLCH2O75038 1416 aa13.54□□□□□ -0.24
PSMA6-207ENST00000554620 A2ML1A8K2U0 1454 aa13.54□□□□□ -0.24
PSMA6-207ENST00000554620 CDK12Q9NYV4 1490 aaPredicted RBP13.54□□□□□ -0.24
PSMA6-207ENST00000554620 FAM9AQ8IZU1 332 aaPredicted RBP13.53□□□□□ -0.24
PSMA6-207ENST00000554620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.25
PSMA6-207ENST00000554620 HNRNPUL2Q1KMD3 747 aaKnown RBP13.52□□□□□ -0.25
PSMA6-207ENST00000554620 MLH3Q9UHC1 1453 aa13.52□□□□□ -0.25
PSMA6-207ENST00000554620 CLTCQ00610 1675 aaKnown RBP13.51□□□□□ -0.25
PSMA6-207ENST00000554620 CDK13Q14004 1512 aaKnown RBP13.51□□□□□ -0.25
PSMA6-207ENST00000554620 TRIM52Q96A61 297 aa13.51□□□□□ -0.25
PSMA6-207ENST00000554620 MYO5CQ9NQX4 1742 aa13.5□□□□□ -0.25
PSMA6-207ENST00000554620 FAM135BQ49AJ0 1406 aa13.5□□□□□ -0.25
PSMA6-207ENST00000554620 MSH5O43196 834 aa13.5□□□□□ -0.25
PSMA6-207ENST00000554620 DEPDC5O75140 1603 aa13.5□□□□□ -0.25
PSMA6-207ENST00000554620 MED14O60244 1454 aa13.48□□□□□ -0.25
PSMA6-207ENST00000554620 SAMD9Q5K651 1589 aa13.48□□□□□ -0.25
PSMA6-207ENST00000554620 IQGAP1P46940 1657 aa13.47□□□□□ -0.25
PSMA6-207ENST00000554620 PLEKHD1A6NEE1 506 aa13.47□□□□□ -0.25
PSMA6-207ENST00000554620 ROBO1Q9Y6N7 1651 aa13.47□□□□□ -0.25
PSMA6-207ENST00000554620 LRP5O75197 1615 aa13.46□□□□□ -0.25
PSMA6-207ENST00000554620 XIRP1Q702N8 1843 aaKnown RBP13.46□□□□□ -0.25
PSMA6-207ENST00000554620 ZRANB1Q9UGI0 708 aa13.45□□□□□ -0.26
PSMA6-207ENST00000554620 NPHP4O75161 1426 aaPredicted RBP13.45□□□□□ -0.26
PSMA6-207ENST00000554620 ZNF772Q68DY9 489 aaPredicted RBP13.44□□□□□ -0.26
PSMA6-207ENST00000554620 AFAP1Q8N556 730 aa13.44□□□□□ -0.26
PSMA6-207ENST00000554620 RBM33Q96EV2 1170 aaKnown RBP13.43□□□□□ -0.26
PSMA6-207ENST00000554620 KIDINS220Q9ULH0 1771 aa13.43□□□□□ -0.26
PSMA6-207ENST00000554620 LRP6O75581 1613 aa13.42□□□□□ -0.26
PSMA6-207ENST00000554620 ITSN2Q9NZM3 1697 aa13.42□□□□□ -0.26
PSMA6-207ENST00000554620 EFCAB2Q5VUJ9 269 aa13.41□□□□□ -0.26
PSMA6-207ENST00000554620 ABCC1P33527 1531 aa13.39□□□□□ -0.27
PSMA6-207ENST00000554620 RXRBP28702 533 aa13.39□□□□□ -0.27
PSMA6-207ENST00000554620 P3H3Q8IVL6 736 aa13.39□□□□□ -0.27
PSMA6-207ENST00000554620 MYT1LQ9UL68 1186 aa13.39□□□□□ -0.27
PSMA6-207ENST00000554620 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.39□□□□□ -0.27
PSMA6-207ENST00000554620 JCADQ9P266 1359 aa13.39□□□□□ -0.27
PSMA6-207ENST00000554620 PHLPP1O60346 1717 aa13.38□□□□□ -0.27
PSMA6-207ENST00000554620 ZC3H13Q5T200 1668 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms