RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 EHMT2Q96KQ7 1210 aa40.07■■■■■ 4.01
FOXA1-204ENST00000554607 HECW1Q76N89 1606 aa40.05■■■■■ 4
FOXA1-204ENST00000554607 EFCAB2Q5VUJ9 269 aa40.05■■■■■ 4
FOXA1-204ENST00000554607 ARHGAP35Q9NRY4 1499 aa40■■■■□ 3.99
FOXA1-204ENST00000554607 PLPPR3Q6T4P5 718 aa39.98■■■■□ 3.99
FOXA1-204ENST00000554607 MLECQ14165 292 aa39.97■■■■□ 3.99
FOXA1-204ENST00000554607 SIGLEC1Q9BZZ2 1709 aa39.95■■■■□ 3.99
FOXA1-204ENST00000554607 MYO5CQ9NQX4 1742 aa39.95■■■■□ 3.99
FOXA1-204ENST00000554607 ATP10AO60312 1499 aa39.94■■■■□ 3.98
FOXA1-204ENST00000554607 HSPA2P54652 639 aa39.9■■■■□ 3.98
FOXA1-204ENST00000554607 TROQ12816 1431 aaPredicted RBP39.9■■■■□ 3.98
FOXA1-204ENST00000554607 C9orf84Q5VXU9 1444 aa39.89■■■■□ 3.98
FOXA1-204ENST00000554607 KIF14Q15058 1648 aa39.88■■■■□ 3.97
FOXA1-204ENST00000554607 CHIC1Q5VXU3 224 aa39.88■■■■□ 3.97
FOXA1-204ENST00000554607 CLIP1P30622 1438 aa39.88■■■■□ 3.97
FOXA1-204ENST00000554607 FER1L4A9Z1Z3 1794 aa39.87■■■■□ 3.97
FOXA1-204ENST00000554607 ZNF518AQ6AHZ1 1483 aa39.83■■■■□ 3.97
FOXA1-204ENST00000554607 ARHGAP5Q13017 1502 aa39.81■■■■□ 3.96
FOXA1-204ENST00000554607 ARHGEF12Q9NZN5 1544 aa39.81■■■■□ 3.96
FOXA1-204ENST00000554607 AFAP1Q8N556 730 aa39.77■■■■□ 3.96
FOXA1-204ENST00000554607 MYT1LQ9UL68 1186 aa39.75■■■■□ 3.95
FOXA1-204ENST00000554607 KDM5CP41229 1560 aa39.72■■■■□ 3.95
FOXA1-204ENST00000554607 LRRIQ1Q96JM4 1722 aa39.68■■■■□ 3.94
FOXA1-204ENST00000554607 CCDC18Q5T9S5 1454 aa39.65■■■■□ 3.94
FOXA1-204ENST00000554607 CASKIN1Q8WXD9 1431 aa39.65■■■■□ 3.94
FOXA1-204ENST00000554607 CEBPAP49715 358 aaPredicted RBP39.64■■■■□ 3.94
FOXA1-204ENST00000554607 CDC42BPBQ9Y5S2 1711 aa39.62■■■■□ 3.93
FOXA1-204ENST00000554607 PREX1Q8TCU6 1659 aa39.62■■■■□ 3.93
FOXA1-204ENST00000554607 MLH3Q9UHC1 1453 aa39.62■■■■□ 3.93
FOXA1-204ENST00000554607 CERKQ8TCT0 537 aa39.6■■■■□ 3.93
FOXA1-204ENST00000554607 REREQ9P2R6 1566 aa39.59■■■■□ 3.93
FOXA1-204ENST00000554607 DIP2CQ9Y2E4 1556 aa39.59■■■■□ 3.93
FOXA1-204ENST00000554607 PREX2Q70Z35 1606 aa39.56■■■■□ 3.92
FOXA1-204ENST00000554607 DMRT2Q9Y5R5 561 aa39.53■■■■□ 3.92
FOXA1-204ENST00000554607 ABCC1P33527 1531 aa39.53■■■■□ 3.92
FOXA1-204ENST00000554607 SETD1BQ9UPS6 1966 aaKnown RBP39.53■■■■□ 3.92
FOXA1-204ENST00000554607 TRAPPC8Q9Y2L5 1435 aa39.52■■■■□ 3.92
FOXA1-204ENST00000554607 UHRF1BP1Q6BDS2 1440 aa39.51■■■■□ 3.92
FOXA1-204ENST00000554607 ESF1Q9H501 851 aaKnown RBP39.51■■■■□ 3.92
FOXA1-204ENST00000554607 ABCA6Q8N139 1617 aa39.51■■■■□ 3.91
FOXA1-204ENST00000554607 AGLP35573 1532 aa39.49■■■■□ 3.91
FOXA1-204ENST00000554607 ITSN2Q9NZM3 1697 aa39.46■■■■□ 3.91
FOXA1-204ENST00000554607 FYCO1Q9BQS8 1478 aa39.44■■■■□ 3.9
FOXA1-204ENST00000554607 CDC42BPAQ5VT25 1732 aa39.4■■■■□ 3.9
FOXA1-204ENST00000554607 KIDINS220Q9ULH0 1771 aa39.37■■■■□ 3.89
FOXA1-204ENST00000554607 ZNF777Q9ULD5 760 aaPredicted RBP39.37■■■■□ 3.89
FOXA1-204ENST00000554607 STRCQ7RTU9 1775 aa39.36■■■■□ 3.89
FOXA1-204ENST00000554607 C3P01024 1663 aa39.36■■■■□ 3.89
FOXA1-204ENST00000554607 CNTLNQ9NXG0 1405 aa39.35■■■■□ 3.89
FOXA1-204ENST00000554607 GPATCH8Q9UKJ3 1502 aaKnown RBP39.3■■■■□ 3.88
FOXA1-204ENST00000554607 SAMD9LQ8IVG5 1584 aa39.29■■■■□ 3.88
FOXA1-204ENST00000554607 SPAG9O60271 1321 aaKnown RBP39.29■■■■□ 3.88
FOXA1-204ENST00000554607 PTPRTO14522 1441 aa39.26■■■■□ 3.88
FOXA1-204ENST00000554607 HNRNPMP52272 730 aaKnown RBP eCLIP39.25■■■■□ 3.87
FOXA1-204ENST00000554607 SYCP2Q9BX26 1530 aa39.24■■■■□ 3.87
FOXA1-204ENST00000554607 CFDP1Q9UEE9 299 aaPredicted RBP39.23■■■■□ 3.87
FOXA1-204ENST00000554607 KIAA1107Q9UPP5 1409 aa39.23■■■■□ 3.87
FOXA1-204ENST00000554607 PLEKHH2Q8IVE3 1493 aa39.22■■■■□ 3.87
FOXA1-204ENST00000554607 CCNB3Q8WWL7 1395 aa39.19■■■■□ 3.86
FOXA1-204ENST00000554607 NPATQ14207 1427 aa39.16■■■■□ 3.86
FOXA1-204ENST00000554607 ZMYM3Q14202 1370 aa39.15■■■■□ 3.86
FOXA1-204ENST00000554607 MROH2AA6NES4 1674 aa39.14■■■■□ 3.86
FOXA1-204ENST00000554607 MTUS2Q5JR59 1369 aa39.13■■■■□ 3.85
FOXA1-204ENST00000554607 ATP7AQ04656 1500 aa39.13■■■■□ 3.85
FOXA1-204ENST00000554607 NCOA1Q15788 1441 aa39.11■■■■□ 3.85
FOXA1-204ENST00000554607 SUPT6HQ7KZ85 1726 aaKnown RBP39.1■■■■□ 3.85
FOXA1-204ENST00000554607 A2MP01023 1474 aa39.08■■■■□ 3.85
FOXA1-204ENST00000554607 INO80Q9ULG1 1556 aaPredicted RBP39.06■■■■□ 3.84
FOXA1-204ENST00000554607 PLXNC1O60486 1568 aa39.04■■■■□ 3.84
FOXA1-204ENST00000554607 PPP6R1Q9UPN7 881 aa39.01■■■■□ 3.84
FOXA1-204ENST00000554607 CAMSAP1Q5T5Y3 1602 aa39■■■■□ 3.83
FOXA1-204ENST00000554607 GGT6Q6P531 493 aa39■■■■□ 3.83
FOXA1-204ENST00000554607 LTBP4Q8N2S1 1624 aa38.98■■■■□ 3.83
FOXA1-204ENST00000554607 CLTCQ00610 1675 aaKnown RBP38.97■■■■□ 3.83
FOXA1-204ENST00000554607 IQSEC2Q5JU85 1478 aa38.95■■■■□ 3.83
FOXA1-204ENST00000554607 ZNF644Q9H582 1327 aaPredicted RBP38.93■■■■□ 3.82
FOXA1-204ENST00000554607 ADGBQ8N7X0 1667 aa38.93■■■■□ 3.82
FOXA1-204ENST00000554607 EHBP1L1Q8N3D4 1523 aa38.93■■■■□ 3.82
FOXA1-204ENST00000554607 TIAM1Q13009 1591 aa38.91■■■■□ 3.82
FOXA1-204ENST00000554607 PTPRKQ15262 1439 aa38.91■■■■□ 3.82
FOXA1-204ENST00000554607 PKD2Q13563 968 aa38.9■■■■□ 3.82
FOXA1-204ENST00000554607 NCKAP5LQ9HCH0 1330 aa38.89■■■■□ 3.82
FOXA1-204ENST00000554607 MBD5Q9P267 1494 aa38.89■■■■□ 3.82
FOXA1-204ENST00000554607 RTEL1-TNFRSF6BF6WH68 1400 aa38.89■■■■□ 3.82
FOXA1-204ENST00000554607 DISP3Q9P2K9 1392 aa38.88■■■■□ 3.81
FOXA1-204ENST00000554607 CEP162Q5TB80 1403 aa38.88■■■■□ 3.81
FOXA1-204ENST00000554607 PLA2R1Q13018 1463 aa38.86■■■■□ 3.81
FOXA1-204ENST00000554607 MYO3AQ8NEV4 1616 aa38.85■■■■□ 3.81
FOXA1-204ENST00000554607 ZNF142P52746 1687 aaPredicted RBP38.85■■■■□ 3.81
FOXA1-204ENST00000554607 CEP170BQ9Y4F5 1589 aaPredicted RBP38.82■■■■□ 3.81
FOXA1-204ENST00000554607 DHX29Q7Z478 1369 aaKnown RBP38.82■■■■□ 3.8
FOXA1-204ENST00000554607 RSPH4AQ5TD94 716 aa38.78■■■■□ 3.8
FOXA1-204ENST00000554607 TCOF1Q13428 1488 aaKnown RBP38.77■■■■□ 3.8
FOXA1-204ENST00000554607 ZNF335Q9H4Z2 1342 aaPredicted RBP38.76■■■■□ 3.8
FOXA1-204ENST00000554607 CCDC141Q6ZP82 1450 aa38.72■■■■□ 3.79
FOXA1-204ENST00000554607 KIF3BO15066 747 aa38.71■■■■□ 3.79
FOXA1-204ENST00000554607 A2ML1A8K2U0 1454 aa38.71■■■■□ 3.79
FOXA1-204ENST00000554607 NCOA2Q15596 1464 aa38.69■■■■□ 3.78
FOXA1-204ENST00000554607 ILDR2Q71H61 639 aa38.68■■■■□ 3.78
FOXA1-204ENST00000554607 CAMSAP2Q08AD1 1489 aa38.66■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms