RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 BIVM-ERCC5R4GMW8 1640 aa4.69□□□□□ -1.66
PRPF39-206ENST00000554429 AQRO60306 1485 aaKnown RBP eCLIP4.68□□□□□ -1.662e-7■■■■□ 20.5
PRPF39-206ENST00000554429 FGD5Q6ZNL6 1462 aa4.68□□□□□ -1.66
PRPF39-206ENST00000554429 SNAPC4Q5SXM2 1469 aa4.68□□□□□ -1.66
PRPF39-206ENST00000554429 BMP2KQ9NSY1 1161 aaPredicted RBP4.68□□□□□ -1.66
PRPF39-206ENST00000554429 SOGA1O94964 1423 aa4.67□□□□□ -1.66
PRPF39-206ENST00000554429 RNF166Q96A37 237 aaPredicted RBP4.67□□□□□ -1.66
PRPF39-206ENST00000554429 TIMELESSQ9UNS1 1208 aa4.67□□□□□ -1.66
PRPF39-206ENST00000554429 KRTAP3-3Q9BYR6 98 aa4.67□□□□□ -1.66
PRPF39-206ENST00000554429 KRTAP3-2Q9BYR7 98 aa4.67□□□□□ -1.66
PRPF39-206ENST00000554429 ADAMTS12P58397 1594 aa4.66□□□□□ -1.66
PRPF39-206ENST00000554429 RAD54L2Q9Y4B4 1467 aa4.66□□□□□ -1.66
PRPF39-206ENST00000554429 NUP160Q12769 1436 aa4.66□□□□□ -1.66
PRPF39-206ENST00000554429 TOP2BQ02880 1626 aa4.65□□□□□ -1.66
PRPF39-206ENST00000554429 ERICH3Q5RHP9 1530 aa4.65□□□□□ -1.67
PRPF39-206ENST00000554429 GAPVD1Q14C86 1478 aa4.64□□□□□ -1.67
PRPF39-206ENST00000554429 KIF13AQ9H1H9 1805 aa4.64□□□□□ -1.67
PRPF39-206ENST00000554429 EMP3P54852 163 aa4.64□□□□□ -1.67
PRPF39-206ENST00000554429 CSRNP3Q8WYN3 585 aa4.64□□□□□ -1.67
PRPF39-206ENST00000554429 CEP170Q5SW79 1584 aa4.63□□□□□ -1.67
PRPF39-206ENST00000554429 GRIN2AQ12879 1464 aa4.63□□□□□ -1.67
PRPF39-206ENST00000554429 COLQQ9Y215 455 aaPredicted RBP4.62□□□□□ -1.67
PRPF39-206ENST00000554429 SGIP1Q9BQI5 828 aa4.62□□□□□ -1.67
PRPF39-206ENST00000554429 TDRD9Q8NDG6 1382 aaKnown RBP4.61□□□□□ -1.67
PRPF39-206ENST00000554429 KIF12Q96FN5 646 aa4.61□□□□□ -1.67
PRPF39-206ENST00000554429 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.61□□□□□ -1.67
PRPF39-206ENST00000554429 FHAD1B1AJZ9 1412 aa4.61□□□□□ -1.67
PRPF39-206ENST00000554429 MAPKBP1O60336 1514 aa4.61□□□□□ -1.67
PRPF39-206ENST00000554429 HS3ST6Q96QI5 342 aa4.61□□□□□ -1.67
PRPF39-206ENST00000554429 ARXQ96QS3 562 aa4.61□□□□□ -1.67
PRPF39-206ENST00000554429 RUSC2Q8N2Y8 1516 aa4.6□□□□□ -1.67
PRPF39-206ENST00000554429 TULP1O00294 542 aaPredicted RBP4.6□□□□□ -1.67
PRPF39-206ENST00000554429 CYB5RLQ6IPT4 315 aa4.6□□□□□ -1.67
PRPF39-206ENST00000554429 RGS20O76081 388 aa4.59□□□□□ -1.67
PRPF39-206ENST00000554429 WRNQ14191 1432 aaPredicted RBP eCLIP4.59□□□□□ -1.67
PRPF39-206ENST00000554429 PLCG2P16885 1265 aa4.59□□□□□ -1.67
PRPF39-206ENST00000554429 ERCC6L2Q5T890 1561 aa4.59□□□□□ -1.67
PRPF39-206ENST00000554429 MNX1P50219 401 aaPredicted RBP4.59□□□□□ -1.68
PRPF39-206ENST00000554429 MYT1LQ9UL68 1186 aa4.58□□□□□ -1.68
PRPF39-206ENST00000554429 CUL7Q14999 1698 aa4.58□□□□□ -1.68
PRPF39-206ENST00000554429 TTLL13PA6NNM8 815 aa4.58□□□□□ -1.68
PRPF39-206ENST00000554429 CHMP7Q8WUX9 453 aaPredicted RBP4.58□□□□□ -1.68
PRPF39-206ENST00000554429 CCDC61Q9Y6R9 512 aa4.58□□□□□ -1.68
PRPF39-206ENST00000554429 MARVELD3Q96A59 401 aa4.57□□□□□ -1.68
PRPF39-206ENST00000554429 DIP2BQ9P265 1576 aa4.57□□□□□ -1.68
PRPF39-206ENST00000554429 LMTK3Q96Q04 1460 aa4.57□□□□□ -1.68
PRPF39-206ENST00000554429 GLI2P10070 1586 aa4.56□□□□□ -1.68
PRPF39-206ENST00000554429 ABCC10Q5T3U5 1492 aa4.56□□□□□ -1.68
PRPF39-206ENST00000554429 IFFO2Q5TF58 517 aa4.56□□□□□ -1.68
PRPF39-206ENST00000554429 ADCY10Q96PN6 1610 aa4.56□□□□□ -1.68
PRPF39-206ENST00000554429 KLHL34Q8N239 644 aa4.55□□□□□ -1.68
PRPF39-206ENST00000554429 RANGAP1P46060 587 aaPredicted RBP4.54□□□□□ -1.68
PRPF39-206ENST00000554429 UHRF1BP1LA0JNW5 1464 aa4.54□□□□□ -1.68
PRPF39-206ENST00000554429 PPRC1Q5VV67 1664 aaKnown RBP4.54□□□□□ -1.68
PRPF39-206ENST00000554429 KIAA0586Q9BVV6 1533 aa4.54□□□□□ -1.68
PRPF39-206ENST00000554429 TAOK2Q9UL54 1235 aa4.53□□□□□ -1.68
PRPF39-206ENST00000554429 FAM205CA6NFA0 338 aa4.53□□□□□ -1.68
PRPF39-206ENST00000554429 EIF5BO60841 1220 aaKnown RBP4.53□□□□□ -1.68
PRPF39-206ENST00000554429 TRIM35Q9UPQ4 493 aa4.53□□□□□ -1.68
PRPF39-206ENST00000554429 PRG4Q92954 1404 aaPredicted RBP4.52□□□□□ -1.69
PRPF39-206ENST00000554429 MAP3K4Q9Y6R4 1608 aa4.51□□□□□ -1.69
PRPF39-206ENST00000554429 POTEB3A0JP26 581 aa4.51□□□□□ -1.69
PRPF39-206ENST00000554429 POTEBQ6S5H4 581 aa4.51□□□□□ -1.69
PRPF39-206ENST00000554429 IRX5P78411 483 aaPredicted RBP4.5□□□□□ -1.69
PRPF39-206ENST00000554429 OCEL1Q9H607 264 aa4.5□□□□□ -1.69
PRPF39-206ENST00000554429 TPRNQ4KMQ1 711 aa4.5□□□□□ -1.69
PRPF39-206ENST00000554429 KDM6BO15054 1643 aa4.5□□□□□ -1.69
PRPF39-206ENST00000554429 UGGT2Q9NYU1 1516 aa4.49□□□□□ -1.69
PRPF39-206ENST00000554429 HOMEZQ8IX15 550 aa4.49□□□□□ -1.69
PRPF39-206ENST00000554429 ABCC2Q92887 1545 aa4.49□□□□□ -1.69
PRPF39-206ENST00000554429 JPH4Q96JJ6 628 aa4.48□□□□□ -1.69
PRPF39-206ENST00000554429 PODXL2Q9NZ53 605 aa4.48□□□□□ -1.69
PRPF39-206ENST00000554429 IGF1RP08069 1367 aa4.48□□□□□ -1.69
PRPF39-206ENST00000554429 PLB1Q6P1J6 1458 aa4.48□□□□□ -1.69
PRPF39-206ENST00000554429 KDM5BQ9UGL1 1544 aa4.48□□□□□ -1.69
PRPF39-206ENST00000554429 IQGAP2Q13576 1575 aa4.48□□□□□ -1.69
PRPF39-206ENST00000554429 KIF27Q86VH2 1401 aa4.48□□□□□ -1.69
PRPF39-206ENST00000554429 SLC34A2O95436 690 aa4.48□□□□□ -1.69
PRPF39-206ENST00000554429 L3MBTL3Q96JM7 780 aaPredicted RBP4.48□□□□□ -1.69
PRPF39-206ENST00000554429 TSPYL2Q9H2G4 693 aaPredicted RBP4.48□□□□□ -1.69
PRPF39-206ENST00000554429 PLA2G2EQ9NZK7 142 aa4.48□□□□□ -1.69
PRPF39-206ENST00000554429 MAP3K13O43283 966 aa4.47□□□□□ -1.69
PRPF39-206ENST00000554429 SLC4A1APQ9BWU0 796 aaKnown RBP4.47□□□□□ -1.69
PRPF39-206ENST00000554429 CFAP43Q8NDM7 1665 aa4.47□□□□□ -1.69
PRPF39-206ENST00000554429 TRPC6Q9Y210 931 aa4.47□□□□□ -1.69
PRPF39-206ENST00000554429 CTTNBP2Q8WZ74 1663 aa4.47□□□□□ -1.69
PRPF39-206ENST00000554429 TNIKQ9UKE5 1360 aa4.46□□□□□ -1.7
PRPF39-206ENST00000554429 ZCCHC11Q5TAX3 1644 aaKnown RBP4.46□□□□□ -1.7
PRPF39-206ENST00000554429 RBAK-RBAKDNI3L0D1 243 aa4.46□□□□□ -1.7
PRPF39-206ENST00000554429 DISP1Q96F81 1524 aa4.46□□□□□ -1.7
PRPF39-206ENST00000554429 KIAA0556O60303 1618 aa4.46□□□□□ -1.7
PRPF39-206ENST00000554429 CARMIL2Q6F5E8 1435 aa4.45□□□□□ -1.7
PRPF39-206ENST00000554429 EPRSP07814 1512 aaKnown RBP4.45□□□□□ -1.7
PRPF39-206ENST00000554429 TEX14Q8IWB6 1497 aa4.45□□□□□ -1.7
PRPF39-206ENST00000554429 PLEKHG5O94827 1062 aa4.45□□□□□ -1.7
PRPF39-206ENST00000554429 HOXB1P14653 301 aaPredicted RBP4.45□□□□□ -1.7
PRPF39-206ENST00000554429 TSPOAP1O95153 1857 aa4.45□□□□□ -1.7
PRPF39-206ENST00000554429 MAGI3Q5TCQ9 1506 aa4.45□□□□□ -1.7
PRPF39-206ENST00000554429 ABCA8O94911 1581 aa4.44□□□□□ -1.7
PRPF39-206ENST00000554429 UACAQ9BZF9 1416 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms