RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 PLCH2O75038 1416 aa20.82■□□□□ 0.92
XRCC3-206ENST00000554170 MYO5CQ9NQX4 1742 aa20.81■□□□□ 0.92
XRCC3-206ENST00000554170 HSPA2P54652 639 aa20.8■□□□□ 0.92
XRCC3-206ENST00000554170 SCAPERQ9BY12 1400 aa20.79■□□□□ 0.92
XRCC3-206ENST00000554170 PLPPR3Q6T4P5 718 aa20.79■□□□□ 0.92
XRCC3-206ENST00000554170 MLECQ14165 292 aa20.76■□□□□ 0.91
XRCC3-206ENST00000554170 ARHGEF12Q9NZN5 1544 aa20.76■□□□□ 0.91
XRCC3-206ENST00000554170 ATP10AO60312 1499 aa20.75■□□□□ 0.91
XRCC3-206ENST00000554170 C9orf84Q5VXU9 1444 aa20.74■□□□□ 0.91
XRCC3-206ENST00000554170 FMN1Q68DA7 1419 aa20.74■□□□□ 0.91
XRCC3-206ENST00000554170 PREX1Q8TCU6 1659 aa20.73■□□□□ 0.91
XRCC3-206ENST00000554170 KIF14Q15058 1648 aa20.73■□□□□ 0.91
XRCC3-206ENST00000554170 EFCAB2Q5VUJ9 269 aa20.7■□□□□ 0.9
XRCC3-206ENST00000554170 ARHGAP35Q9NRY4 1499 aa20.69■□□□□ 0.9
XRCC3-206ENST00000554170 ZNF518AQ6AHZ1 1483 aa20.69■□□□□ 0.9
XRCC3-206ENST00000554170 SETD1BQ9UPS6 1966 aaKnown RBP20.68■□□□□ 0.9
XRCC3-206ENST00000554170 KDM5CP41229 1560 aa20.68■□□□□ 0.9
XRCC3-206ENST00000554170 LRRIQ1Q96JM4 1722 aa20.68■□□□□ 0.9
XRCC3-206ENST00000554170 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
XRCC3-206ENST00000554170 CDK11AQ9UQ88 783 aaPredicted RBP20.68■□□□□ 0.9
XRCC3-206ENST00000554170 ARHGAP5Q13017 1502 aa20.67■□□□□ 0.9
XRCC3-206ENST00000554170 CERKQ8TCT0 537 aa20.66■□□□□ 0.9
XRCC3-206ENST00000554170 TROQ12816 1431 aaPredicted RBP20.66■□□□□ 0.9
XRCC3-206ENST00000554170 CDC42BPBQ9Y5S2 1711 aa20.64■□□□□ 0.9
XRCC3-206ENST00000554170 STRCQ7RTU9 1775 aa20.64■□□□□ 0.89
XRCC3-206ENST00000554170 DIP2CQ9Y2E4 1556 aa20.63■□□□□ 0.89
XRCC3-206ENST00000554170 CLIP1P30622 1438 aa20.62■□□□□ 0.89
XRCC3-206ENST00000554170 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
XRCC3-206ENST00000554170 REREQ9P2R6 1566 aa20.62■□□□□ 0.89
XRCC3-206ENST00000554170 CEBPAP49715 358 aaPredicted RBP20.61■□□□□ 0.89
XRCC3-206ENST00000554170 AFAP1Q8N556 730 aa20.61■□□□□ 0.89
XRCC3-206ENST00000554170 ABCA6Q8N139 1617 aa20.6■□□□□ 0.89
XRCC3-206ENST00000554170 PREX2Q70Z35 1606 aa20.58■□□□□ 0.89
XRCC3-206ENST00000554170 C3P01024 1663 aa20.58■□□□□ 0.88
XRCC3-206ENST00000554170 UHRF1BP1Q6BDS2 1440 aa20.57■□□□□ 0.88
XRCC3-206ENST00000554170 MLH3Q9UHC1 1453 aa20.56■□□□□ 0.88
XRCC3-206ENST00000554170 ITSN2Q9NZM3 1697 aa20.56■□□□□ 0.88
XRCC3-206ENST00000554170 ABCC1P33527 1531 aa20.55■□□□□ 0.88
XRCC3-206ENST00000554170 MYT1LQ9UL68 1186 aa20.55■□□□□ 0.88
XRCC3-206ENST00000554170 DMRT2Q9Y5R5 561 aa20.54■□□□□ 0.88
XRCC3-206ENST00000554170 AGLP35573 1532 aa20.53■□□□□ 0.88
XRCC3-206ENST00000554170 CEP162Q5TB80 1403 aa20.53■□□□□ 0.88
XRCC3-206ENST00000554170 CDC42BPAQ5VT25 1732 aa20.52■□□□□ 0.88
XRCC3-206ENST00000554170 KIDINS220Q9ULH0 1771 aa20.51■□□□□ 0.87
XRCC3-206ENST00000554170 TRAPPC8Q9Y2L5 1435 aa20.51■□□□□ 0.87
XRCC3-206ENST00000554170 CCDC18Q5T9S5 1454 aa20.5■□□□□ 0.87
XRCC3-206ENST00000554170 CASKIN1Q8WXD9 1431 aa20.49■□□□□ 0.87
XRCC3-206ENST00000554170 PTPRTO14522 1441 aa20.46■□□□□ 0.87
XRCC3-206ENST00000554170 ESF1Q9H501 851 aaKnown RBP20.45■□□□□ 0.86
XRCC3-206ENST00000554170 CNTLNQ9NXG0 1405 aa20.44■□□□□ 0.86
XRCC3-206ENST00000554170 SAMD9LQ8IVG5 1584 aa20.42■□□□□ 0.86
XRCC3-206ENST00000554170 MROH2AA6NES4 1674 aa20.42■□□□□ 0.86
XRCC3-206ENST00000554170 FYCO1Q9BQS8 1478 aa20.41■□□□□ 0.86
XRCC3-206ENST00000554170 LTBP4Q8N2S1 1624 aa20.39■□□□□ 0.86
XRCC3-206ENST00000554170 NCOA1Q15788 1441 aa20.39■□□□□ 0.85
XRCC3-206ENST00000554170 SUPT6HQ7KZ85 1726 aaKnown RBP20.39■□□□□ 0.85
XRCC3-206ENST00000554170 SYCP2Q9BX26 1530 aa20.38■□□□□ 0.85
XRCC3-206ENST00000554170 DISP3Q9P2K9 1392 aa20.37■□□□□ 0.85
XRCC3-206ENST00000554170 NPATQ14207 1427 aa20.36■□□□□ 0.85
XRCC3-206ENST00000554170 GPATCH8Q9UKJ3 1502 aaKnown RBP20.35■□□□□ 0.85
XRCC3-206ENST00000554170 IQSEC2Q5JU85 1478 aa20.35■□□□□ 0.85
XRCC3-206ENST00000554170 CAMSAP1Q5T5Y3 1602 aa20.35■□□□□ 0.85
XRCC3-206ENST00000554170 ZNF777Q9ULD5 760 aaPredicted RBP20.34■□□□□ 0.85
XRCC3-206ENST00000554170 ATP7AQ04656 1500 aa20.33■□□□□ 0.85
XRCC3-206ENST00000554170 CLTCQ00610 1675 aaKnown RBP20.33■□□□□ 0.85
XRCC3-206ENST00000554170 PLXNC1O60486 1568 aa20.33■□□□□ 0.84
XRCC3-206ENST00000554170 INO80Q9ULG1 1556 aaPredicted RBP20.33■□□□□ 0.84
XRCC3-206ENST00000554170 SPAG9O60271 1321 aaKnown RBP20.32■□□□□ 0.84
XRCC3-206ENST00000554170 ILDR2Q71H61 639 aa20.32■□□□□ 0.84
XRCC3-206ENST00000554170 ZMYM3Q14202 1370 aa20.32■□□□□ 0.84
XRCC3-206ENST00000554170 ZNF142P52746 1687 aaPredicted RBP20.32■□□□□ 0.84
XRCC3-206ENST00000554170 SPATA31D1Q6ZQQ2 1576 aa20.31■□□□□ 0.84
XRCC3-206ENST00000554170 KIAA1107Q9UPP5 1409 aa20.3■□□□□ 0.84
XRCC3-206ENST00000554170 MYO3AQ8NEV4 1616 aa20.3■□□□□ 0.84
XRCC3-206ENST00000554170 PLEKHH2Q8IVE3 1493 aa20.3■□□□□ 0.84
XRCC3-206ENST00000554170 HNRNPMP52272 730 aaKnown RBP eCLIP20.29■□□□□ 0.84
XRCC3-206ENST00000554170 VPS8Q8N3P4 1428 aa20.28■□□□□ 0.84
XRCC3-206ENST00000554170 A2MP01023 1474 aa20.27■□□□□ 0.84
XRCC3-206ENST00000554170 ADGBQ8N7X0 1667 aa20.26■□□□□ 0.83
XRCC3-206ENST00000554170 SOCS7O14512 581 aa20.25■□□□□ 0.83
XRCC3-206ENST00000554170 CFDP1Q9UEE9 299 aaPredicted RBP20.25■□□□□ 0.83
XRCC3-206ENST00000554170 CEP170BQ9Y4F5 1589 aaPredicted RBP20.25■□□□□ 0.83
XRCC3-206ENST00000554170 PLA2R1Q13018 1463 aa20.24■□□□□ 0.83
XRCC3-206ENST00000554170 CCNB3Q8WWL7 1395 aa20.24■□□□□ 0.83
XRCC3-206ENST00000554170 PTPRKQ15262 1439 aa20.24■□□□□ 0.83
XRCC3-206ENST00000554170 NCKAP5LQ9HCH0 1330 aa20.23■□□□□ 0.83
XRCC3-206ENST00000554170 TCOF1Q13428 1488 aaKnown RBP20.21■□□□□ 0.83
XRCC3-206ENST00000554170 MTUS2Q5JR59 1369 aa20.21■□□□□ 0.83
XRCC3-206ENST00000554170 PKD2Q13563 968 aa20.2■□□□□ 0.82
XRCC3-206ENST00000554170 ZNF335Q9H4Z2 1342 aaPredicted RBP20.2■□□□□ 0.82
XRCC3-206ENST00000554170 GGT6Q6P531 493 aa20.19■□□□□ 0.82
XRCC3-206ENST00000554170 TIAM1Q13009 1591 aa20.19■□□□□ 0.82
XRCC3-206ENST00000554170 APLP2Q06481 763 aa20.17■□□□□ 0.82
XRCC3-206ENST00000554170 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
XRCC3-206ENST00000554170 MBD5Q9P267 1494 aa20.15■□□□□ 0.82
XRCC3-206ENST00000554170 EHBP1L1Q8N3D4 1523 aa20.15■□□□□ 0.82
XRCC3-206ENST00000554170 DNMT1P26358 1616 aaKnown RBP20.14■□□□□ 0.81
XRCC3-206ENST00000554170 POLR1AO95602 1720 aaPredicted RBP20.13■□□□□ 0.81
XRCC3-206ENST00000554170 A2ML1A8K2U0 1454 aa20.13■□□□□ 0.81
XRCC3-206ENST00000554170 ZNF644Q9H582 1327 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms