RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 PLB1Q6P1J6 1458 aa3.78□□□□□ -1.8
PRPF39-205ENST00000554081 RAPGEF2Q9Y4G8 1499 aa3.78□□□□□ -1.8
PRPF39-205ENST00000554081 TSPOAP1O95153 1857 aa3.77□□□□□ -1.81
PRPF39-205ENST00000554081 ZNF644Q9H582 1327 aaPredicted RBP3.77□□□□□ -1.81
PRPF39-205ENST00000554081 A0A0G2JS52 829 aa3.77□□□□□ -1.81
PRPF39-205ENST00000554081 LMOD2Q6P5Q4 547 aa3.77□□□□□ -1.81
PRPF39-205ENST00000554081 CD109Q6YHK3 1445 aa3.77□□□□□ -1.81
PRPF39-205ENST00000554081 NUTM2FA1L443 756 aa3.77□□□□□ -1.81
PRPF39-205ENST00000554081 ASXL2Q76L83 1435 aa3.76□□□□□ -1.81
PRPF39-205ENST00000554081 POLR3GLQ9BT43 218 aa3.76□□□□□ -1.81
PRPF39-205ENST00000554081 ABCA10Q8WWZ4 1543 aa3.76□□□□□ -1.81
PRPF39-205ENST00000554081 KDM4FA0A1W2PPD8 638 aa3.76□□□□□ -1.81
PRPF39-205ENST00000554081 RGL3Q3MIN7 710 aa3.76□□□□□ -1.81
PRPF39-205ENST00000554081 ILDR1Q86SU0 546 aaPredicted RBP3.76□□□□□ -1.81
PRPF39-205ENST00000554081 WASHC2CQ9Y4E1 1318 aa3.76□□□□□ -1.81
PRPF39-205ENST00000554081 PRDM2Q13029 1718 aa3.76□□□□□ -1.81
PRPF39-205ENST00000554081 PELP1Q8IZL8 1130 aaKnown RBP3.76□□□□□ -1.81
PRPF39-205ENST00000554081 SPAG9O60271 1321 aaKnown RBP3.75□□□□□ -1.81
PRPF39-205ENST00000554081 UACAQ9BZF9 1416 aa3.75□□□□□ -1.81
PRPF39-205ENST00000554081 CHD1O14646 1710 aa3.75□□□□□ -1.81
PRPF39-205ENST00000554081 POLA2Q14181 598 aa3.75□□□□□ -1.81
PRPF39-205ENST00000554081 AMER1Q5JTC6 1135 aaPredicted RBP3.75□□□□□ -1.81
PRPF39-205ENST00000554081 PCGF6Q9BYE7 350 aa3.75□□□□□ -1.81
PRPF39-205ENST00000554081 RTN4Q9NQC3 1192 aaKnown RBP3.75□□□□□ -1.81
PRPF39-205ENST00000554081 ZBTB7CA1YPR0 619 aa3.75□□□□□ -1.81
PRPF39-205ENST00000554081 UBAP1LF5GYI3 381 aa3.75□□□□□ -1.81
PRPF39-205ENST00000554081 NPM3O75607 178 aaKnown RBP3.75□□□□□ -1.81
PRPF39-205ENST00000554081 PRKAR2AP13861 404 aaKnown RBP3.74□□□□□ -1.81
PRPF39-205ENST00000554081 CLIP1P30622 1438 aa3.74□□□□□ -1.81
PRPF39-205ENST00000554081 SAFB2Q14151 953 aaKnown RBP eCLIP3.74□□□□□ -1.81
PRPF39-205ENST00000554081 SCAPERQ9BY12 1400 aa3.74□□□□□ -1.81
PRPF39-205ENST00000554081 KIAA0586Q9BVV6 1533 aa3.74□□□□□ -1.81
PRPF39-205ENST00000554081 KANK4Q5T7N3 995 aaPredicted RBP3.74□□□□□ -1.81
PRPF39-205ENST00000554081 CCNB3Q8WWL7 1395 aa3.74□□□□□ -1.81
PRPF39-205ENST00000554081 HAP1P54257 671 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-205ENST00000554081 FBXO31Q5XUX0 539 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-205ENST00000554081 SLC26A8Q96RN1 970 aa3.73□□□□□ -1.81
PRPF39-205ENST00000554081 KDM2AQ9Y2K7 1162 aa3.73□□□□□ -1.81
PRPF39-205ENST00000554081 SRCAPQ6ZRS2 3230 aa3.73□□□□□ -1.81
PRPF39-205ENST00000554081 CEP170Q5SW79 1584 aa3.73□□□□□ -1.81
PRPF39-205ENST00000554081 SLC4A2P04920 1241 aa3.72□□□□□ -1.81
PRPF39-205ENST00000554081 NUTM2BA6NNL0 878 aaPredicted RBP3.72□□□□□ -1.81
PRPF39-205ENST00000554081 NUTM2EB1AL46 878 aaPredicted RBP3.72□□□□□ -1.81
PRPF39-205ENST00000554081 NUTM2AQ8IVF1 878 aaPredicted RBP3.72□□□□□ -1.81
PRPF39-205ENST00000554081 NEUROD1Q13562 356 aa3.72□□□□□ -1.81
PRPF39-205ENST00000554081 STK26Q9P289 416 aa3.72□□□□□ -1.81
PRPF39-205ENST00000554081 TARBP1Q13395 1621 aaKnown RBP3.72□□□□□ -1.81
PRPF39-205ENST00000554081 NCKAP5LQ9HCH0 1330 aa3.71□□□□□ -1.82
PRPF39-205ENST00000554081 ARXQ96QS3 562 aa3.71□□□□□ -1.82
PRPF39-205ENST00000554081 TOP2BQ02880 1626 aa3.71□□□□□ -1.82
PRPF39-205ENST00000554081 DISP3Q9P2K9 1392 aa3.71□□□□□ -1.82
PRPF39-205ENST00000554081 SOX12O15370 315 aa3.7□□□□□ -1.82
PRPF39-205ENST00000554081 CCDC9Q9Y3X0 531 aaKnown RBP3.7□□□□□ -1.82
PRPF39-205ENST00000554081 NUP160Q12769 1436 aa3.7□□□□□ -1.82
PRPF39-205ENST00000554081 GOLGA3Q08378 1498 aa3.69□□□□□ -1.82
PRPF39-205ENST00000554081 MEX3CQ5U5Q3 659 aaKnown RBP3.69□□□□□ -1.82
PRPF39-205ENST00000554081 MAMSTRQ6ZN01 415 aa3.69□□□□□ -1.82
PRPF39-205ENST00000554081 TXNDC2Q86VQ3 553 aa3.69□□□□□ -1.82
PRPF39-205ENST00000554081 CDK13Q14004 1512 aaKnown RBP3.69□□□□□ -1.82
PRPF39-205ENST00000554081 EID1Q9Y6B2 187 aa3.69□□□□□ -1.82
PRPF39-205ENST00000554081 ERICH6Q7L0X2 663 aa3.68□□□□□ -1.82
PRPF39-205ENST00000554081 DCBLD2Q96PD2 775 aa3.68□□□□□ -1.82
PRPF39-205ENST00000554081 IQGAP2Q13576 1575 aa3.68□□□□□ -1.82
PRPF39-205ENST00000554081 PROSER2Q86WR7 435 aaPredicted RBP3.68□□□□□ -1.82
PRPF39-205ENST00000554081 ERICH3Q5RHP9 1530 aa3.68□□□□□ -1.82
PRPF39-205ENST00000554081 EEA1Q15075 1411 aa3.68□□□□□ -1.82
PRPF39-205ENST00000554081 CEP162Q5TB80 1403 aa3.68□□□□□ -1.82
PRPF39-205ENST00000554081 ADAMTS12P58397 1594 aa3.67□□□□□ -1.82
PRPF39-205ENST00000554081 LCE2DQ5TA82 110 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-205ENST00000554081 ARHGAP5Q13017 1502 aa3.67□□□□□ -1.82
PRPF39-205ENST00000554081 ATP10BO94823 1461 aa3.67□□□□□ -1.82
PRPF39-205ENST00000554081 ABCC2Q92887 1545 aa3.67□□□□□ -1.82
PRPF39-205ENST00000554081 PRKCSHP14314 528 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-205ENST00000554081 XPCQ01831 940 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-205ENST00000554081 FMN1Q68DA7 1419 aa3.67□□□□□ -1.82
PRPF39-205ENST00000554081 ABCC10Q5T3U5 1492 aa3.67□□□□□ -1.82
PRPF39-205ENST00000554081 KDM6BO15054 1643 aa3.67□□□□□ -1.82
PRPF39-205ENST00000554081 ANKLE2Q86XL3 938 aa3.66□□□□□ -1.82
PRPF39-205ENST00000554081 SPDYE1Q8NFV5 336 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-205ENST00000554081 ZNF335Q9H4Z2 1342 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-205ENST00000554081 POGZQ7Z3K3 1410 aa3.66□□□□□ -1.82
PRPF39-205ENST00000554081 PAK3O75914 559 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-205ENST00000554081 ADAMTS2O95450 1211 aa3.66□□□□□ -1.82
PRPF39-205ENST00000554081 FANCAO15360 1455 aa3.66□□□□□ -1.82
PRPF39-205ENST00000554081 ADGRL1O94910 1474 aa3.66□□□□□ -1.82
PRPF39-205ENST00000554081 COL17A1Q9UMD9 1497 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-205ENST00000554081 WDR7Q9Y4E6 1490 aa3.66□□□□□ -1.82
PRPF39-205ENST00000554081 PBRM1Q86U86 1689 aa3.66□□□□□ -1.82
PRPF39-205ENST00000554081 AKNAQ7Z591 1439 aa3.66□□□□□ -1.82
PRPF39-205ENST00000554081 DENND4BO75064 1496 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-205ENST00000554081 YEATS2Q9ULM3 1422 aa3.65□□□□□ -1.82
PRPF39-205ENST00000554081 LMTK3Q96Q04 1460 aa3.65□□□□□ -1.82
PRPF39-205ENST00000554081 THEMISQ8N1K5 641 aaPredicted RBP3.65□□□□□ -1.82
PRPF39-205ENST00000554081 USP35Q9P2H5 1018 aa3.65□□□□□ -1.82
PRPF39-205ENST00000554081 TEX14Q8IWB6 1497 aa3.65□□□□□ -1.83
PRPF39-205ENST00000554081 TOM1O60784 492 aa3.65□□□□□ -1.83
PRPF39-205ENST00000554081 CERKQ8TCT0 537 aa3.65□□□□□ -1.83
PRPF39-205ENST00000554081 HIRIP3Q9BW71 556 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-205ENST00000554081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.64□□□□□ -1.83
PRPF39-205ENST00000554081 RBAK-RBAKDNI3L0D1 243 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms