RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 FMN1Q68DA7 1419 aa29.41■■■□□ 2.3
SYNE2-211ENST00000553801 HECW1Q76N89 1606 aa29.41■■■□□ 2.3
SYNE2-211ENST00000553801 EFCAB2Q5VUJ9 269 aa29.4■■■□□ 2.3
SYNE2-211ENST00000553801 MLECQ14165 292 aa29.39■■■□□ 2.3
SYNE2-211ENST00000553801 HSPA2P54652 639 aa29.36■■■□□ 2.29
SYNE2-211ENST00000553801 EHMT2Q96KQ7 1210 aa29.34■■■□□ 2.29
SYNE2-211ENST00000553801 SIGLEC1Q9BZZ2 1709 aa29.34■■■□□ 2.29
SYNE2-211ENST00000553801 ATP10AO60312 1499 aa29.33■■■□□ 2.29
SYNE2-211ENST00000553801 FER1L4A9Z1Z3 1794 aa29.31■■■□□ 2.28
SYNE2-211ENST00000553801 MYO5CQ9NQX4 1742 aa29.31■■■□□ 2.28
SYNE2-211ENST00000553801 ARHGAP35Q9NRY4 1499 aa29.29■■■□□ 2.28
SYNE2-211ENST00000553801 C9orf84Q5VXU9 1444 aa29.29■■■□□ 2.28
SYNE2-211ENST00000553801 TROQ12816 1431 aaPredicted RBP29.25■■■□□ 2.27
SYNE2-211ENST00000553801 ARHGEF12Q9NZN5 1544 aa29.25■■■□□ 2.27
SYNE2-211ENST00000553801 KIF14Q15058 1648 aa29.24■■■□□ 2.27
SYNE2-211ENST00000553801 CLIP1P30622 1438 aa29.24■■■□□ 2.27
SYNE2-211ENST00000553801 ZNF518AQ6AHZ1 1483 aa29.23■■■□□ 2.27
SYNE2-211ENST00000553801 ARHGAP5Q13017 1502 aa29.2■■■□□ 2.27
SYNE2-211ENST00000553801 MYT1LQ9UL68 1186 aa29.2■■■□□ 2.26
SYNE2-211ENST00000553801 AFAP1Q8N556 730 aa29.19■■■□□ 2.26
SYNE2-211ENST00000553801 CERKQ8TCT0 537 aa29.17■■■□□ 2.26
SYNE2-211ENST00000553801 KDM5CP41229 1560 aa29.14■■■□□ 2.26
SYNE2-211ENST00000553801 CEBPAP49715 358 aaPredicted RBP29.14■■■□□ 2.26
SYNE2-211ENST00000553801 PREX1Q8TCU6 1659 aa29.13■■■□□ 2.25
SYNE2-211ENST00000553801 CHIC1Q5VXU3 224 aa29.12■■■□□ 2.25
SYNE2-211ENST00000553801 SETD1BQ9UPS6 1966 aaKnown RBP29.1■■■□□ 2.25
SYNE2-211ENST00000553801 DMRT2Q9Y5R5 561 aa29.1■■■□□ 2.25
SYNE2-211ENST00000553801 MLH3Q9UHC1 1453 aa29.07■■■□□ 2.24
SYNE2-211ENST00000553801 LRRIQ1Q96JM4 1722 aa29.06■■■□□ 2.24
SYNE2-211ENST00000553801 DIP2CQ9Y2E4 1556 aa29.06■■■□□ 2.24
SYNE2-211ENST00000553801 CDC42BPBQ9Y5S2 1711 aa29.06■■■□□ 2.24
SYNE2-211ENST00000553801 REREQ9P2R6 1566 aa29.05■■■□□ 2.24
SYNE2-211ENST00000553801 UHRF1BP1Q6BDS2 1440 aa29.05■■■□□ 2.24
SYNE2-211ENST00000553801 CCDC18Q5T9S5 1454 aa29.04■■■□□ 2.24
SYNE2-211ENST00000553801 ESF1Q9H501 851 aaKnown RBP29.04■■■□□ 2.24
SYNE2-211ENST00000553801 CASKIN1Q8WXD9 1431 aa29.03■■■□□ 2.24
SYNE2-211ENST00000553801 PREX2Q70Z35 1606 aa29.01■■■□□ 2.23
SYNE2-211ENST00000553801 TRAPPC8Q9Y2L5 1435 aa29■■■□□ 2.23
SYNE2-211ENST00000553801 ABCC1P33527 1531 aa28.99■■■□□ 2.23
SYNE2-211ENST00000553801 AGLP35573 1532 aa28.99■■■□□ 2.23
SYNE2-211ENST00000553801 ABCA6Q8N139 1617 aa28.98■■■□□ 2.23
SYNE2-211ENST00000553801 STRCQ7RTU9 1775 aa28.95■■■□□ 2.22
SYNE2-211ENST00000553801 ITSN2Q9NZM3 1697 aa28.94■■■□□ 2.22
SYNE2-211ENST00000553801 C3P01024 1663 aa28.92■■■□□ 2.22
SYNE2-211ENST00000553801 CNTLNQ9NXG0 1405 aa28.91■■■□□ 2.22
SYNE2-211ENST00000553801 CDC42BPAQ5VT25 1732 aa28.89■■■□□ 2.21
SYNE2-211ENST00000553801 KIDINS220Q9ULH0 1771 aa28.88■■■□□ 2.21
SYNE2-211ENST00000553801 PTPRTO14522 1441 aa28.88■■■□□ 2.21
SYNE2-211ENST00000553801 ZNF777Q9ULD5 760 aaPredicted RBP28.88■■■□□ 2.21
SYNE2-211ENST00000553801 FYCO1Q9BQS8 1478 aa28.88■■■□□ 2.21
SYNE2-211ENST00000553801 SPAG9O60271 1321 aaKnown RBP28.82■■■□□ 2.2
SYNE2-211ENST00000553801 SAMD9LQ8IVG5 1584 aa28.82■■■□□ 2.2
SYNE2-211ENST00000553801 GPATCH8Q9UKJ3 1502 aaKnown RBP28.79■■■□□ 2.2
SYNE2-211ENST00000553801 HNRNPMP52272 730 aaKnown RBP eCLIP28.79■■■□□ 2.2
SYNE2-211ENST00000553801 SYCP2Q9BX26 1530 aa28.77■■■□□ 2.2
SYNE2-211ENST00000553801 NPATQ14207 1427 aa28.77■■■□□ 2.2
SYNE2-211ENST00000553801 CFDP1Q9UEE9 299 aaPredicted RBP28.76■■■□□ 2.19
SYNE2-211ENST00000553801 ZMYM3Q14202 1370 aa28.75■■■□□ 2.19
SYNE2-211ENST00000553801 PLEKHH2Q8IVE3 1493 aa28.75■■■□□ 2.19
SYNE2-211ENST00000553801 NCOA1Q15788 1441 aa28.75■■■□□ 2.19
SYNE2-211ENST00000553801 KIAA1107Q9UPP5 1409 aa28.75■■■□□ 2.19
SYNE2-211ENST00000553801 MROH2AA6NES4 1674 aa28.74■■■□□ 2.19
SYNE2-211ENST00000553801 CCNB3Q8WWL7 1395 aa28.73■■■□□ 2.19
SYNE2-211ENST00000553801 ATP7AQ04656 1500 aa28.7■■■□□ 2.19
SYNE2-211ENST00000553801 SUPT6HQ7KZ85 1726 aaKnown RBP28.7■■■□□ 2.19
SYNE2-211ENST00000553801 DISP3Q9P2K9 1392 aa28.7■■■□□ 2.18
SYNE2-211ENST00000553801 LTBP4Q8N2S1 1624 aa28.68■■■□□ 2.18
SYNE2-211ENST00000553801 A2MP01023 1474 aa28.67■■■□□ 2.18
SYNE2-211ENST00000553801 MTUS2Q5JR59 1369 aa28.67■■■□□ 2.18
SYNE2-211ENST00000553801 IQSEC2Q5JU85 1478 aa28.66■■■□□ 2.18
SYNE2-211ENST00000553801 CAMSAP1Q5T5Y3 1602 aa28.66■■■□□ 2.18
SYNE2-211ENST00000553801 GGT6Q6P531 493 aa28.64■■■□□ 2.18
SYNE2-211ENST00000553801 PPP6R1Q9UPN7 881 aa28.64■■■□□ 2.18
SYNE2-211ENST00000553801 PLXNC1O60486 1568 aa28.63■■■□□ 2.17
SYNE2-211ENST00000553801 INO80Q9ULG1 1556 aaPredicted RBP28.63■■■□□ 2.17
SYNE2-211ENST00000553801 CLTCQ00610 1675 aaKnown RBP28.61■■■□□ 2.17
SYNE2-211ENST00000553801 PKD2Q13563 968 aa28.6■■■□□ 2.17
SYNE2-211ENST00000553801 NCKAP5LQ9HCH0 1330 aa28.6■■■□□ 2.17
SYNE2-211ENST00000553801 PTPRKQ15262 1439 aa28.58■■■□□ 2.17
SYNE2-211ENST00000553801 PLA2R1Q13018 1463 aa28.56■■■□□ 2.16
SYNE2-211ENST00000553801 ADGBQ8N7X0 1667 aa28.55■■■□□ 2.16
SYNE2-211ENST00000553801 ILDR2Q71H61 639 aa28.55■■■□□ 2.16
SYNE2-211ENST00000553801 ZNF142P52746 1687 aaPredicted RBP28.54■■■□□ 2.16
SYNE2-211ENST00000553801 MYO3AQ8NEV4 1616 aa28.54■■■□□ 2.16
SYNE2-211ENST00000553801 ZNF644Q9H582 1327 aaPredicted RBP28.53■■■□□ 2.16
SYNE2-211ENST00000553801 CEP170BQ9Y4F5 1589 aaPredicted RBP28.52■■■□□ 2.16
SYNE2-211ENST00000553801 RTEL1-TNFRSF6BF6WH68 1400 aa28.52■■■□□ 2.16
SYNE2-211ENST00000553801 ZNF335Q9H4Z2 1342 aaPredicted RBP28.51■■■□□ 2.15
SYNE2-211ENST00000553801 EHBP1L1Q8N3D4 1523 aa28.5■■■□□ 2.15
SYNE2-211ENST00000553801 SOCS7O14512 581 aa28.5■■■□□ 2.15
SYNE2-211ENST00000553801 TIAM1Q13009 1591 aa28.5■■■□□ 2.15
SYNE2-211ENST00000553801 MBD5Q9P267 1494 aa28.49■■■□□ 2.15
SYNE2-211ENST00000553801 TCOF1Q13428 1488 aaKnown RBP28.48■■■□□ 2.15
SYNE2-211ENST00000553801 DHX29Q7Z478 1369 aaKnown RBP28.48■■■□□ 2.15
SYNE2-211ENST00000553801 SPATA31D1Q6ZQQ2 1576 aa28.47■■■□□ 2.15
SYNE2-211ENST00000553801 CEP162Q5TB80 1403 aa28.47■■■□□ 2.15
SYNE2-211ENST00000553801 UBAP1LF5GYI3 381 aa28.46■■■□□ 2.15
SYNE2-211ENST00000553801 A2ML1A8K2U0 1454 aa28.43■■■□□ 2.14
SYNE2-211ENST00000553801 RSPH4AQ5TD94 716 aa28.43■■■□□ 2.14
SYNE2-211ENST00000553801 KIF3BO15066 747 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms