RNA–Protein interactions for RNA: ENST00000553716.5

PGF-203, Transcript of placental growth factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGF, Length 1,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGF-203ENST00000553716 CFDP1Q9UEE9 299 aaPredicted RBP34■■■■□ 3.03
PGF-203ENST00000553716 KDM5BQ9UGL1 1544 aa33.95■■■■□ 3.03
PGF-203ENST00000553716 CHIC2Q9UKJ5 165 aa33.93■■■■□ 3.02
PGF-203ENST00000553716 CROCC2H7BZ55 1655 aa33.92■■■■□ 3.02
PGF-203ENST00000553716 RRP7BPQ9NSQ0 103 aa33.92■■■■□ 3.02
PGF-203ENST00000553716 ZCCHC11Q5TAX3 1644 aaKnown RBP33.92■■■■□ 3.02
PGF-203ENST00000553716 KDM6BO15054 1643 aa33.91■■■■□ 3.02
PGF-203ENST00000553716 PREX2Q70Z35 1606 aa33.88■■■■□ 3.01
PGF-203ENST00000553716 CDC42BPBQ9Y5S2 1711 aa33.86■■■■□ 3.01
PGF-203ENST00000553716 ADGRL2O95490 1459 aa33.86■■■■□ 3.01
PGF-203ENST00000553716 ADGBQ8N7X0 1667 aa33.86■■■■□ 3.01
PGF-203ENST00000553716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.84■■■■□ 3.01
PGF-203ENST00000553716 OSCARQ8IYS5 282 aa33.83■■■■□ 3.01
PGF-203ENST00000553716 TTC37Q6PGP7 1564 aa33.82■■■■□ 3.01
PGF-203ENST00000553716 ZNF316A6NFI3 1004 aaPredicted RBP33.8■■■■□ 3
PGF-203ENST00000553716 NCOA1Q15788 1441 aa33.79■■■■□ 3
PGF-203ENST00000553716 SHANK2Q9UPX8 1470 aa33.79■■■■□ 3
PGF-203ENST00000553716 ARHGEF5Q12774 1597 aa33.79■■■■□ 3
PGF-203ENST00000553716 ZNF777Q9ULD5 760 aaPredicted RBP33.77■■■■□ 3
PGF-203ENST00000553716 ACIN1Q9UKV3 1341 aaKnown RBP33.77■■■■□ 3
PGF-203ENST00000553716 SAMD9LQ8IVG5 1584 aa33.76■■■■□ 3
PGF-203ENST00000553716 DENND4BO75064 1496 aaPredicted RBP33.75■■■□□ 2.99
PGF-203ENST00000553716 MBD5Q9P267 1494 aa33.75■■■□□ 2.99
PGF-203ENST00000553716 SIN3AQ96ST3 1273 aa33.73■■■□□ 2.99
PGF-203ENST00000553716 TIMELESSQ9UNS1 1208 aa33.73■■■□□ 2.99
PGF-203ENST00000553716 MYO5CQ9NQX4 1742 aa33.72■■■□□ 2.99
PGF-203ENST00000553716 ANKRD30AQ9BXX3 1397 aa33.65■■■□□ 2.98
PGF-203ENST00000553716 C9orf84Q5VXU9 1444 aa33.64■■■□□ 2.98
PGF-203ENST00000553716 ARHGAP5Q13017 1502 aa33.62■■■□□ 2.97
PGF-203ENST00000553716 PLCH2O75038 1416 aa33.61■■■□□ 2.97
PGF-203ENST00000553716 CCDC141Q6ZP82 1450 aa33.6■■■□□ 2.97
PGF-203ENST00000553716 KIAA1107Q9UPP5 1409 aa33.59■■■□□ 2.97
PGF-203ENST00000553716 HNRNPMP52272 730 aaKnown RBP eCLIP33.58■■■□□ 2.97
PGF-203ENST00000553716 NEUROD1Q13562 356 aa33.58■■■□□ 2.97
PGF-203ENST00000553716 RSPH4AQ5TD94 716 aa33.58■■■□□ 2.97
PGF-203ENST00000553716 TRIM52Q96A61 297 aa33.58■■■□□ 2.97
PGF-203ENST00000553716 MPHOSPH9Q99550 1183 aa33.58■■■□□ 2.97
PGF-203ENST00000553716 PLEKHH2Q8IVE3 1493 aa33.57■■■□□ 2.96
PGF-203ENST00000553716 WDR7Q9Y4E6 1490 aa33.57■■■□□ 2.96
PGF-203ENST00000553716 KCNH8Q96L42 1107 aa33.56■■■□□ 2.96
PGF-203ENST00000553716 MAST1Q9Y2H9 1570 aa33.56■■■□□ 2.96
PGF-203ENST00000553716 ARAP3Q8WWN8 1544 aa33.56■■■□□ 2.96
PGF-203ENST00000553716 SYCP2Q9BX26 1530 aa33.55■■■□□ 2.96
PGF-203ENST00000553716 DIEXFQ68CQ4 756 aaKnown RBP33.55■■■□□ 2.96
PGF-203ENST00000553716 TSPY4P0CV99 314 aa33.52■■■□□ 2.96
PGF-203ENST00000553716 TSPY10P0CW01 314 aa33.52■■■□□ 2.96
PGF-203ENST00000553716 ANKRD50Q9ULJ7 1429 aa33.52■■■□□ 2.96
PGF-203ENST00000553716 PZPP20742 1482 aa33.5■■■□□ 2.95
PGF-203ENST00000553716 ARHGEF12Q9NZN5 1544 aa33.48■■■□□ 2.95
PGF-203ENST00000553716 PPP1R15AO75807 674 aaPredicted RBP33.47■■■□□ 2.95
PGF-203ENST00000553716 ABCA9Q8IUA7 1624 aa33.46■■■□□ 2.95
PGF-203ENST00000553716 ABCC1P33527 1531 aa33.44■■■□□ 2.94
PGF-203ENST00000553716 KIF15Q9NS87 1388 aa33.44■■■□□ 2.94
PGF-203ENST00000553716 ANKRD30BQ9BXX2 1392 aa33.43■■■□□ 2.94
PGF-203ENST00000553716 ASXL2Q76L83 1435 aa33.43■■■□□ 2.94
PGF-203ENST00000553716 EFCAB2Q5VUJ9 269 aa33.42■■■□□ 2.94
PGF-203ENST00000553716 KDM5DQ9BY66 1539 aa33.41■■■□□ 2.94
PGF-203ENST00000553716 TONSLQ96HA7 1378 aa33.4■■■□□ 2.94
PGF-203ENST00000553716 PLXNC1O60486 1568 aa33.4■■■□□ 2.94
PGF-203ENST00000553716 SLC4A1APQ9BWU0 796 aaKnown RBP33.36■■■□□ 2.93
PGF-203ENST00000553716 FOXD1Q16676 465 aa33.31■■■□□ 2.92
PGF-203ENST00000553716 RPRD2Q5VT52 1461 aaKnown RBP33.31■■■□□ 2.92
PGF-203ENST00000553716 TRAPPC8Q9Y2L5 1435 aa33.28■■■□□ 2.92
PGF-203ENST00000553716 FANCAO15360 1455 aa33.23■■■□□ 2.91
PGF-203ENST00000553716 NPM1P06748 294 aaKnown RBP eCLIP33.23■■■□□ 2.91
PGF-203ENST00000553716 UNC13BO14795 1591 aa33.23■■■□□ 2.91
PGF-203ENST00000553716 NUP155O75694 1391 aa33.23■■■□□ 2.91
PGF-203ENST00000553716 DUOX2Q9NRD8 1548 aa33.23■■■□□ 2.91
PGF-203ENST00000553716 RTEL1-TNFRSF6BF6WH68 1400 aa33.21■■■□□ 2.91
PGF-203ENST00000553716 TEX14Q8IWB6 1497 aa33.18■■■□□ 2.9
PGF-203ENST00000553716 PKD2Q13563 968 aa33.17■■■□□ 2.9
PGF-203ENST00000553716 ZFYVE16Q7Z3T8 1539 aa33.16■■■□□ 2.9
PGF-203ENST00000553716 ERBINQ96RT1 1412 aa33.15■■■□□ 2.9
PGF-203ENST00000553716 FAM135AQ9P2D6 1515 aa33.13■■■□□ 2.89
PGF-203ENST00000553716 MAGI2Q86UL8 1455 aa33.13■■■□□ 2.89
PGF-203ENST00000553716 L3MBTL2Q969R5 705 aa33.12■■■□□ 2.89
PGF-203ENST00000553716 RIMBP3CA6NJZ7 1639 aa33.11■■■□□ 2.89
PGF-203ENST00000553716 RIMBP3BA6NNM3 1639 aa33.11■■■□□ 2.89
PGF-203ENST00000553716 RIMBP3Q9UFD9 1639 aa33.11■■■□□ 2.89
PGF-203ENST00000553716 INO80Q9ULG1 1556 aaPredicted RBP33.11■■■□□ 2.89
PGF-203ENST00000553716 ADGRL1O94910 1474 aa33.1■■■□□ 2.89
PGF-203ENST00000553716 IQGAP3Q86VI3 1631 aa33.09■■■□□ 2.89
PGF-203ENST00000553716 SPAG9O60271 1321 aaKnown RBP33.08■■■□□ 2.89
PGF-203ENST00000553716 AFAP1Q8N556 730 aa33.07■■■□□ 2.89
PGF-203ENST00000553716 SCAPERQ9BY12 1400 aa33.06■■■□□ 2.88
PGF-203ENST00000553716 CFAP74Q9C0B2 1584 aa33.04■■■□□ 2.88
PGF-203ENST00000553716 CD109Q6YHK3 1445 aa33.04■■■□□ 2.88
PGF-203ENST00000553716 ATP7AQ04656 1500 aa33.03■■■□□ 2.88
PGF-203ENST00000553716 MIER1Q8N108 512 aa33■■■□□ 2.87
PGF-203ENST00000553716 DEPDC5O75140 1603 aa32.95■■■□□ 2.87
PGF-203ENST00000553716 CYB5RLQ6IPT4 315 aa32.93■■■□□ 2.86
PGF-203ENST00000553716 KIDINS220Q9ULH0 1771 aa32.93■■■□□ 2.86
PGF-203ENST00000553716 ZNF518AQ6AHZ1 1483 aa32.92■■■□□ 2.86
PGF-203ENST00000553716 NBPF8Q3BBV2 869 aa32.91■■■□□ 2.86
PGF-203ENST00000553716 KDM5CP41229 1560 aa32.91■■■□□ 2.86
PGF-203ENST00000553716 GLI2P10070 1586 aa32.9■■■□□ 2.86
PGF-203ENST00000553716 PLA2R1Q13018 1463 aa32.9■■■□□ 2.86
PGF-203ENST00000553716 MAP3K4Q9Y6R4 1608 aa32.89■■■□□ 2.86
PGF-203ENST00000553716 NEO1Q92859 1461 aa32.89■■■□□ 2.86
PGF-203ENST00000553716 EIF2AK4Q9P2K8 1649 aaKnown RBP32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms