RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 DIEXFQ68CQ4 756 aaKnown RBP13.66□□□□□ -0.22
MTHFD1-203ENST00000553391 ERCC6L2Q5T890 1561 aa13.66□□□□□ -0.22
MTHFD1-203ENST00000553391 UHRF1BP1LA0JNW5 1464 aa13.63□□□□□ -0.23
MTHFD1-203ENST00000553391 PPP1R15AO75807 674 aaPredicted RBP13.63□□□□□ -0.23
MTHFD1-203ENST00000553391 NEUROD1Q13562 356 aa13.63□□□□□ -0.23
MTHFD1-203ENST00000553391 ZNF777Q9ULD5 760 aaPredicted RBP13.63□□□□□ -0.23
MTHFD1-203ENST00000553391 PHF23Q9BUL5 403 aaPredicted RBP13.62□□□□□ -0.23
MTHFD1-203ENST00000553391 KIF14Q15058 1648 aa13.61□□□□□ -0.23
MTHFD1-203ENST00000553391 RSPH4AQ5TD94 716 aa13.61□□□□□ -0.23
MTHFD1-203ENST00000553391 OSCARQ8IYS5 282 aa13.61□□□□□ -0.23
MTHFD1-203ENST00000553391 MPHOSPH9Q99550 1183 aa13.61□□□□□ -0.23
MTHFD1-203ENST00000553391 ABCC2Q92887 1545 aa13.6□□□□□ -0.23
MTHFD1-203ENST00000553391 TRIM52Q96A61 297 aa13.6□□□□□ -0.23
MTHFD1-203ENST00000553391 CAMSAP2Q08AD1 1489 aa13.6□□□□□ -0.23
MTHFD1-203ENST00000553391 NCOA1Q15788 1441 aa13.59□□□□□ -0.23
MTHFD1-203ENST00000553391 DNMT1P26358 1616 aaKnown RBP13.59□□□□□ -0.23
MTHFD1-203ENST00000553391 HNRNPMP52272 730 aaKnown RBP eCLIP13.57□□□□□ -0.24
MTHFD1-203ENST00000553391 KDM5BQ9UGL1 1544 aa13.56□□□□□ -0.24
MTHFD1-203ENST00000553391 TSPY4P0CV99 314 aa13.56□□□□□ -0.24
MTHFD1-203ENST00000553391 TSPY10P0CW01 314 aa13.56□□□□□ -0.24
MTHFD1-203ENST00000553391 ADGRL2O95490 1459 aa13.55□□□□□ -0.24
MTHFD1-203ENST00000553391 KCNH8Q96L42 1107 aa13.55□□□□□ -0.24
MTHFD1-203ENST00000553391 ITSN2Q9NZM3 1697 aa13.55□□□□□ -0.24
MTHFD1-203ENST00000553391 ANKRD30AQ9BXX3 1397 aa13.55□□□□□ -0.24
MTHFD1-203ENST00000553391 DENND4BO75064 1496 aaPredicted RBP13.55□□□□□ -0.24
MTHFD1-203ENST00000553391 MBD5Q9P267 1494 aa13.55□□□□□ -0.24
MTHFD1-203ENST00000553391 KDM6BO15054 1643 aa13.54□□□□□ -0.24
MTHFD1-203ENST00000553391 GCC2Q8IWJ2 1684 aa13.53□□□□□ -0.24
MTHFD1-203ENST00000553391 CDC42BPAQ5VT25 1732 aa13.51□□□□□ -0.25
MTHFD1-203ENST00000553391 PLCH2O75038 1416 aa13.5□□□□□ -0.25
MTHFD1-203ENST00000553391 ANKRD30BQ9BXX2 1392 aa13.5□□□□□ -0.25
MTHFD1-203ENST00000553391 EFCAB2Q5VUJ9 269 aa13.5□□□□□ -0.25
MTHFD1-203ENST00000553391 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.49□□□□□ -0.25
MTHFD1-203ENST00000553391 SHANK2Q9UPX8 1470 aa13.49□□□□□ -0.25
MTHFD1-203ENST00000553391 KIAA1107Q9UPP5 1409 aa13.49□□□□□ -0.25
MTHFD1-203ENST00000553391 ARHGEF5Q12774 1597 aa13.49□□□□□ -0.25
MTHFD1-203ENST00000553391 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
MTHFD1-203ENST00000553391 C9orf84Q5VXU9 1444 aa13.47□□□□□ -0.25
MTHFD1-203ENST00000553391 TONSLQ96HA7 1378 aa13.47□□□□□ -0.25
MTHFD1-203ENST00000553391 ANKRD50Q9ULJ7 1429 aa13.47□□□□□ -0.25
MTHFD1-203ENST00000553391 FOXD1Q16676 465 aa13.46□□□□□ -0.25
MTHFD1-203ENST00000553391 PZPP20742 1482 aa13.45□□□□□ -0.26
MTHFD1-203ENST00000553391 PLEKHH2Q8IVE3 1493 aa13.45□□□□□ -0.26
MTHFD1-203ENST00000553391 MIER1Q8N108 512 aa13.45□□□□□ -0.26
MTHFD1-203ENST00000553391 ZCCHC11Q5TAX3 1644 aaKnown RBP13.45□□□□□ -0.26
MTHFD1-203ENST00000553391 CDC42BPBQ9Y5S2 1711 aa13.44□□□□□ -0.26
MTHFD1-203ENST00000553391 SAMD9LQ8IVG5 1584 aa13.44□□□□□ -0.26
MTHFD1-203ENST00000553391 CCDC141Q6ZP82 1450 aa13.43□□□□□ -0.26
MTHFD1-203ENST00000553391 PREX2Q70Z35 1606 aa13.43□□□□□ -0.26
MTHFD1-203ENST00000553391 L3MBTL2Q969R5 705 aa13.43□□□□□ -0.26
MTHFD1-203ENST00000553391 TTC37Q6PGP7 1564 aa13.41□□□□□ -0.26
MTHFD1-203ENST00000553391 CROCC2H7BZ55 1655 aa13.41□□□□□ -0.26
MTHFD1-203ENST00000553391 ADGBQ8N7X0 1667 aa13.41□□□□□ -0.26
MTHFD1-203ENST00000553391 ARHGAP5Q13017 1502 aa13.41□□□□□ -0.26
MTHFD1-203ENST00000553391 ARHGEF12Q9NZN5 1544 aa13.41□□□□□ -0.26
MTHFD1-203ENST00000553391 NPM1P06748 294 aaKnown RBP eCLIP13.41□□□□□ -0.26
MTHFD1-203ENST00000553391 PKD2Q13563 968 aa13.41□□□□□ -0.26
MTHFD1-203ENST00000553391 KIF15Q9NS87 1388 aa13.41□□□□□ -0.26
MTHFD1-203ENST00000553391 NUP155O75694 1391 aa13.4□□□□□ -0.26
MTHFD1-203ENST00000553391 MAST1Q9Y2H9 1570 aa13.38□□□□□ -0.27
MTHFD1-203ENST00000553391 WDR7Q9Y4E6 1490 aa13.38□□□□□ -0.27
MTHFD1-203ENST00000553391 ARAP3Q8WWN8 1544 aa13.38□□□□□ -0.27
MTHFD1-203ENST00000553391 RPRD2Q5VT52 1461 aaKnown RBP13.37□□□□□ -0.27
MTHFD1-203ENST00000553391 ASXL2Q76L83 1435 aa13.37□□□□□ -0.27
MTHFD1-203ENST00000553391 SYCP2Q9BX26 1530 aa13.35□□□□□ -0.27
MTHFD1-203ENST00000553391 KDM5DQ9BY66 1539 aa13.35□□□□□ -0.27
MTHFD1-203ENST00000553391 TRAPPC8Q9Y2L5 1435 aa13.35□□□□□ -0.27
MTHFD1-203ENST00000553391 MYO5CQ9NQX4 1742 aa13.34□□□□□ -0.27
MTHFD1-203ENST00000553391 RTEL1-TNFRSF6BF6WH68 1400 aa13.34□□□□□ -0.27
MTHFD1-203ENST00000553391 NBPF8Q3BBV2 869 aa13.34□□□□□ -0.27
MTHFD1-203ENST00000553391 AFAP1Q8N556 730 aa13.34□□□□□ -0.27
MTHFD1-203ENST00000553391 SPAG9O60271 1321 aaKnown RBP13.32□□□□□ -0.28
MTHFD1-203ENST00000553391 HIRIP3Q9BW71 556 aaPredicted RBP13.31□□□□□ -0.28
MTHFD1-203ENST00000553391 DDX10Q13206 875 aaKnown RBP13.3□□□□□ -0.28
MTHFD1-203ENST00000553391 ABCC1P33527 1531 aa13.29□□□□□ -0.28
MTHFD1-203ENST00000553391 ABCA9Q8IUA7 1624 aa13.29□□□□□ -0.28
MTHFD1-203ENST00000553391 HSPA5P11021 654 aaKnown RBP13.29□□□□□ -0.28
MTHFD1-203ENST00000553391 DUOX2Q9NRD8 1548 aa13.29□□□□□ -0.28
MTHFD1-203ENST00000553391 EIF4G2P78344 907 aaKnown RBP eCLIP13.28□□□□□ -0.28
MTHFD1-203ENST00000553391 SCAPERQ9BY12 1400 aa13.28□□□□□ -0.28
MTHFD1-203ENST00000553391 TEX14Q8IWB6 1497 aa13.28□□□□□ -0.28
MTHFD1-203ENST00000553391 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.27□□□□□ -0.29
MTHFD1-203ENST00000553391 ERBINQ96RT1 1412 aa13.27□□□□□ -0.29
MTHFD1-203ENST00000553391 FANCAO15360 1455 aa13.27□□□□□ -0.29
MTHFD1-203ENST00000553391 PLXNC1O60486 1568 aa13.27□□□□□ -0.29
MTHFD1-203ENST00000553391 FAM135AQ9P2D6 1515 aa13.24□□□□□ -0.29
MTHFD1-203ENST00000553391 CD109Q6YHK3 1445 aa13.24□□□□□ -0.29
MTHFD1-203ENST00000553391 CYB5RLQ6IPT4 315 aa13.24□□□□□ -0.29
MTHFD1-203ENST00000553391 PLA2R1Q13018 1463 aa13.23□□□□□ -0.29
MTHFD1-203ENST00000553391 DHX29Q7Z478 1369 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-203ENST00000553391 UHRF1BP1Q6BDS2 1440 aa13.22□□□□□ -0.29
MTHFD1-203ENST00000553391 CENPBP07199 599 aaPredicted RBP13.22□□□□□ -0.29
MTHFD1-203ENST00000553391 UNC13BO14795 1591 aa13.22□□□□□ -0.29
MTHFD1-203ENST00000553391 ADGRL1O94910 1474 aa13.22□□□□□ -0.29
MTHFD1-203ENST00000553391 ATP10AO60312 1499 aa13.21□□□□□ -0.3
MTHFD1-203ENST00000553391 MAGI2Q86UL8 1455 aa13.21□□□□□ -0.3
MTHFD1-203ENST00000553391 SPATA31E1Q6ZUB1 1445 aa13.21□□□□□ -0.3
MTHFD1-203ENST00000553391 C11orf95C9JLR9 678 aaPredicted RBP13.2□□□□□ -0.3
MTHFD1-203ENST00000553391 WASHC2AQ641Q2 1341 aa13.18□□□□□ -0.3
MTHFD1-203ENST00000553391 KIF3BO15066 747 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms