RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.78■□□□□ 0.92
ACTR6-213ENST00000553038 TTC37Q6PGP7 1564 aa20.78■□□□□ 0.92
ACTR6-213ENST00000553038 WDR7Q9Y4E6 1490 aa20.76■□□□□ 0.91
ACTR6-213ENST00000553038 DAPK1P53355 1430 aa20.75■□□□□ 0.91
ACTR6-213ENST00000553038 RIMBP3CA6NJZ7 1639 aa20.75■□□□□ 0.91
ACTR6-213ENST00000553038 RIMBP3BA6NNM3 1639 aa20.75■□□□□ 0.91
ACTR6-213ENST00000553038 RIMBP3Q9UFD9 1639 aa20.75■□□□□ 0.91
ACTR6-213ENST00000553038 ARHGAP5Q13017 1502 aa20.75■□□□□ 0.91
ACTR6-213ENST00000553038 MYT1Q01538 1121 aa20.75■□□□□ 0.91
ACTR6-213ENST00000553038 RRP7BPQ9NSQ0 103 aa20.75■□□□□ 0.91
ACTR6-213ENST00000553038 ASXL2Q76L83 1435 aa20.74■□□□□ 0.91
ACTR6-213ENST00000553038 PREX2Q70Z35 1606 aa20.73■□□□□ 0.91
ACTR6-213ENST00000553038 DNMT1P26358 1616 aaKnown RBP20.73■□□□□ 0.91
ACTR6-213ENST00000553038 MYO5CQ9NQX4 1742 aa20.72■□□□□ 0.91
ACTR6-213ENST00000553038 ABCC5O15440 1437 aa20.71■□□□□ 0.91
ACTR6-213ENST00000553038 HFM1A2PYH4 1435 aa20.71■□□□□ 0.91
ACTR6-213ENST00000553038 CDC42BPBQ9Y5S2 1711 aa20.7■□□□□ 0.9
ACTR6-213ENST00000553038 HNRNPMP52272 730 aaKnown RBP eCLIP20.68■□□□□ 0.9
ACTR6-213ENST00000553038 NAIPQ13075 1403 aa20.67■□□□□ 0.9
ACTR6-213ENST00000553038 CLSPNQ9HAW4 1339 aa20.66■□□□□ 0.9
ACTR6-213ENST00000553038 SAMD9LQ8IVG5 1584 aa20.65■□□□□ 0.9
ACTR6-213ENST00000553038 PLCH2O75038 1416 aa20.65■□□□□ 0.9
ACTR6-213ENST00000553038 TSPY4P0CV99 314 aa20.65■□□□□ 0.9
ACTR6-213ENST00000553038 TSPY10P0CW01 314 aa20.65■□□□□ 0.9
ACTR6-213ENST00000553038 EFCAB2Q5VUJ9 269 aa20.65■□□□□ 0.9
ACTR6-213ENST00000553038 AKNAQ7Z591 1439 aa20.62■□□□□ 0.89
ACTR6-213ENST00000553038 ROCK1Q13464 1354 aa20.62■□□□□ 0.89
ACTR6-213ENST00000553038 CROCC2H7BZ55 1655 aa20.61■□□□□ 0.89
ACTR6-213ENST00000553038 GCC2Q8IWJ2 1684 aa20.61■□□□□ 0.89
ACTR6-213ENST00000553038 SYCP2Q9BX26 1530 aa20.6■□□□□ 0.89
ACTR6-213ENST00000553038 TRIM52Q96A61 297 aa20.6■□□□□ 0.89
ACTR6-213ENST00000553038 PLEKHH2Q8IVE3 1493 aa20.59■□□□□ 0.89
ACTR6-213ENST00000553038 ADGBQ8N7X0 1667 aa20.59■□□□□ 0.89
ACTR6-213ENST00000553038 MAPKBP1O60336 1514 aa20.59■□□□□ 0.89
ACTR6-213ENST00000553038 ANKRD30AQ9BXX3 1397 aa20.59■□□□□ 0.89
ACTR6-213ENST00000553038 ABCA9Q8IUA7 1624 aa20.59■□□□□ 0.89
ACTR6-213ENST00000553038 C9orf84Q5VXU9 1444 aa20.58■□□□□ 0.89
ACTR6-213ENST00000553038 CCDC141Q6ZP82 1450 aa20.58■□□□□ 0.89
ACTR6-213ENST00000553038 ARHGEF5Q12774 1597 aa20.58■□□□□ 0.88
ACTR6-213ENST00000553038 RSPH4AQ5TD94 716 aa20.58■□□□□ 0.88
ACTR6-213ENST00000553038 MBD5Q9P267 1494 aa20.56■□□□□ 0.88
ACTR6-213ENST00000553038 SHANK2Q9UPX8 1470 aa20.56■□□□□ 0.88
ACTR6-213ENST00000553038 FANCAO15360 1455 aa20.54■□□□□ 0.88
ACTR6-213ENST00000553038 NCOA1Q15788 1441 aa20.54■□□□□ 0.88
ACTR6-213ENST00000553038 KIAA1107Q9UPP5 1409 aa20.53■□□□□ 0.88
ACTR6-213ENST00000553038 ARAP3Q8WWN8 1544 aa20.53■□□□□ 0.88
ACTR6-213ENST00000553038 ADGRL2O95490 1459 aa20.53■□□□□ 0.88
ACTR6-213ENST00000553038 KDM6BO15054 1643 aa20.52■□□□□ 0.88
ACTR6-213ENST00000553038 CD109Q6YHK3 1445 aa20.51■□□□□ 0.87
ACTR6-213ENST00000553038 ABCC1P33527 1531 aa20.5■□□□□ 0.87
ACTR6-213ENST00000553038 SIN3AQ96ST3 1273 aa20.49■□□□□ 0.87
ACTR6-213ENST00000553038 ARHGEF12Q9NZN5 1544 aa20.48■□□□□ 0.87
ACTR6-213ENST00000553038 MYT1LQ9UL68 1186 aa20.48■□□□□ 0.87
ACTR6-213ENST00000553038 KIF15Q9NS87 1388 aa20.48■□□□□ 0.87
ACTR6-213ENST00000553038 ACIN1Q9UKV3 1341 aaKnown RBP20.46■□□□□ 0.87
ACTR6-213ENST00000553038 ADGRL1O94910 1474 aa20.46■□□□□ 0.87
ACTR6-213ENST00000553038 ANKRD50Q9ULJ7 1429 aa20.46■□□□□ 0.87
ACTR6-213ENST00000553038 TRAPPC8Q9Y2L5 1435 aa20.44■□□□□ 0.86
ACTR6-213ENST00000553038 NEUROD1Q13562 356 aa20.43■□□□□ 0.86
ACTR6-213ENST00000553038 SPAG9O60271 1321 aaKnown RBP20.43■□□□□ 0.86
ACTR6-213ENST00000553038 SCAPERQ9BY12 1400 aa20.43■□□□□ 0.86
ACTR6-213ENST00000553038 AFAP1Q8N556 730 aa20.43■□□□□ 0.86
ACTR6-213ENST00000553038 MAST1Q9Y2H9 1570 aa20.42■□□□□ 0.86
ACTR6-213ENST00000553038 FAM69CQ0P6D2 419 aa20.42■□□□□ 0.86
ACTR6-213ENST00000553038 CFAP74Q9C0B2 1584 aa20.42■□□□□ 0.86
ACTR6-213ENST00000553038 ZNF316A6NFI3 1004 aaPredicted RBP20.41■□□□□ 0.86
ACTR6-213ENST00000553038 MPHOSPH9Q99550 1183 aa20.41■□□□□ 0.86
ACTR6-213ENST00000553038 SLC4A1APQ9BWU0 796 aaKnown RBP20.38■□□□□ 0.85
ACTR6-213ENST00000553038 PLXNC1O60486 1568 aa20.36■□□□□ 0.85
ACTR6-213ENST00000553038 DENND4BO75064 1496 aaPredicted RBP20.35■□□□□ 0.85
ACTR6-213ENST00000553038 GLI2P10070 1586 aa20.34■□□□□ 0.85
ACTR6-213ENST00000553038 MAP3K4Q9Y6R4 1608 aa20.34■□□□□ 0.85
ACTR6-213ENST00000553038 DIP2BQ9P265 1576 aa20.34■□□□□ 0.85
ACTR6-213ENST00000553038 NUP155O75694 1391 aa20.34■□□□□ 0.85
ACTR6-213ENST00000553038 FOXD1Q16676 465 aa20.33■□□□□ 0.85
ACTR6-213ENST00000553038 DUOX2Q9NRD8 1548 aa20.32■□□□□ 0.84
ACTR6-213ENST00000553038 RTEL1-TNFRSF6BF6WH68 1400 aa20.31■□□□□ 0.84
ACTR6-213ENST00000553038 ZFYVE16Q7Z3T8 1539 aa20.31■□□□□ 0.84
ACTR6-213ENST00000553038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.31■□□□□ 0.842e-7■■□□□ 12.6
ACTR6-213ENST00000553038 ZNF518AQ6AHZ1 1483 aa20.31■□□□□ 0.84
ACTR6-213ENST00000553038 NEO1Q92859 1461 aa20.31■□□□□ 0.84
ACTR6-213ENST00000553038 ATP7AQ04656 1500 aa20.3■□□□□ 0.84
ACTR6-213ENST00000553038 POGZQ7Z3K3 1410 aa20.28■□□□□ 0.84
ACTR6-213ENST00000553038 DIEXFQ68CQ4 756 aaKnown RBP20.28■□□□□ 0.84
ACTR6-213ENST00000553038 PZPP20742 1482 aa20.28■□□□□ 0.84
ACTR6-213ENST00000553038 ERBINQ96RT1 1412 aa20.28■□□□□ 0.84
ACTR6-213ENST00000553038 TSPOAP1O95153 1857 aa20.27■□□□□ 0.84
ACTR6-213ENST00000553038 TONSLQ96HA7 1378 aa20.27■□□□□ 0.84
ACTR6-213ENST00000553038 INO80Q9ULG1 1556 aaPredicted RBP20.27■□□□□ 0.83
ACTR6-213ENST00000553038 PKD2Q13563 968 aa20.26■□□□□ 0.83
ACTR6-213ENST00000553038 RAPGEF3O95398 923 aa20.25■□□□□ 0.83
ACTR6-213ENST00000553038 TIMELESSQ9UNS1 1208 aa20.24■□□□□ 0.83
ACTR6-213ENST00000553038 TEX14Q8IWB6 1497 aa20.22■□□□□ 0.83
ACTR6-213ENST00000553038 PPP1R15AO75807 674 aaPredicted RBP20.22■□□□□ 0.83
ACTR6-213ENST00000553038 KDM5DQ9BY66 1539 aa20.2■□□□□ 0.82
ACTR6-213ENST00000553038 UNC13BO14795 1591 aa20.19■□□□□ 0.82
ACTR6-213ENST00000553038 KDM5CP41229 1560 aa20.19■□□□□ 0.82
ACTR6-213ENST00000553038 HECW2Q9P2P5 1572 aa20.19■□□□□ 0.82
ACTR6-213ENST00000553038 FAM135AQ9P2D6 1515 aa20.19■□□□□ 0.82
ACTR6-213ENST00000553038 KIDINS220Q9ULH0 1771 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms