RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 ARID3CA6NKF2 412 aa17.09■□□□□ 0.33
CACNB3-224ENST00000552812 TROQ12816 1431 aaPredicted RBP17.09■□□□□ 0.33
CACNB3-224ENST00000552812 UHRF1BP1LA0JNW5 1464 aa17.08■□□□□ 0.33
CACNB3-224ENST00000552812 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.08■□□□□ 0.32
CACNB3-224ENST00000552812 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.32
CACNB3-224ENST00000552812 FGD6Q6ZV73 1430 aa17.07■□□□□ 0.32
CACNB3-224ENST00000552812 ADCY10Q96PN6 1610 aa17.06■□□□□ 0.32
CACNB3-224ENST00000552812 PLEKHD1A6NEE1 506 aa17.02■□□□□ 0.32
CACNB3-224ENST00000552812 MIA2Q96PC5 1412 aa17.02■□□□□ 0.31
CACNB3-224ENST00000552812 CHRDL2Q6WN34 429 aa17.01■□□□□ 0.31
CACNB3-224ENST00000552812 KDM5BQ9UGL1 1544 aa17.01■□□□□ 0.31
CACNB3-224ENST00000552812 KIF14Q15058 1648 aa17■□□□□ 0.31
CACNB3-224ENST00000552812 PTPN23Q9H3S7 1636 aa16.98■□□□□ 0.31
CACNB3-224ENST00000552812 TCOF1Q13428 1488 aaKnown RBP16.98■□□□□ 0.31
CACNB3-224ENST00000552812 FAM50AQ14320 339 aaKnown RBP16.97■□□□□ 0.31
CACNB3-224ENST00000552812 ZCCHC11Q5TAX3 1644 aaKnown RBP16.97■□□□□ 0.31
CACNB3-224ENST00000552812 ITSN2Q9NZM3 1697 aa16.97■□□□□ 0.31
CACNB3-224ENST00000552812 HRCP23327 699 aa16.94■□□□□ 0.3
CACNB3-224ENST00000552812 ABCC10Q5T3U5 1492 aa16.94■□□□□ 0.3
CACNB3-224ENST00000552812 GPATCH8Q9UKJ3 1502 aaKnown RBP16.92■□□□□ 0.3
CACNB3-224ENST00000552812 ITGAEP38570 1179 aa16.89■□□□□ 0.29
CACNB3-224ENST00000552812 CDC42BPAQ5VT25 1732 aa16.89■□□□□ 0.29
CACNB3-224ENST00000552812 CFDP1Q9UEE9 299 aaPredicted RBP16.86■□□□□ 0.29
CACNB3-224ENST00000552812 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.85■□□□□ 0.29
CACNB3-224ENST00000552812 ZEB1P37275 1124 aaPredicted RBP16.84■□□□□ 0.29
CACNB3-224ENST00000552812 PREX2Q70Z35 1606 aa16.84■□□□□ 0.29
CACNB3-224ENST00000552812 CCER1Q8TC90 406 aaPredicted RBP16.84■□□□□ 0.29
CACNB3-224ENST00000552812 CAMSAP2Q08AD1 1489 aa16.84■□□□□ 0.29
CACNB3-224ENST00000552812 WDR7Q9Y4E6 1490 aa16.84■□□□□ 0.29
CACNB3-224ENST00000552812 TTC37Q6PGP7 1564 aa16.83■□□□□ 0.28
CACNB3-224ENST00000552812 SETD5Q9C0A6 1442 aa16.83■□□□□ 0.28
CACNB3-224ENST00000552812 POLA2Q14181 598 aa16.83■□□□□ 0.28
CACNB3-224ENST00000552812 DNMT1P26358 1616 aaKnown RBP16.83■□□□□ 0.28
CACNB3-224ENST00000552812 PTPRKQ15262 1439 aa16.82■□□□□ 0.28
CACNB3-224ENST00000552812 RIMBP3CA6NJZ7 1639 aa16.82■□□□□ 0.28
CACNB3-224ENST00000552812 RIMBP3BA6NNM3 1639 aa16.82■□□□□ 0.28
CACNB3-224ENST00000552812 RIMBP3Q9UFD9 1639 aa16.82■□□□□ 0.28
CACNB3-224ENST00000552812 AKNAQ7Z591 1439 aa16.81■□□□□ 0.28
CACNB3-224ENST00000552812 MYCNP04198 464 aaPredicted RBP16.81■□□□□ 0.28
CACNB3-224ENST00000552812 MYO5CQ9NQX4 1742 aa16.8■□□□□ 0.28
CACNB3-224ENST00000552812 CDC42BPBQ9Y5S2 1711 aa16.8■□□□□ 0.28
CACNB3-224ENST00000552812 HFM1A2PYH4 1435 aa16.8■□□□□ 0.28
CACNB3-224ENST00000552812 DAPK1P53355 1430 aa16.8■□□□□ 0.28
CACNB3-224ENST00000552812 NPM1P06748 294 aaKnown RBP eCLIP16.79■□□□□ 0.28
CACNB3-224ENST00000552812 RAB3GAP2Q9H2M9 1393 aa16.79■□□□□ 0.28
CACNB3-224ENST00000552812 ZNF644Q9H582 1327 aaPredicted RBP16.79■□□□□ 0.28
CACNB3-224ENST00000552812 ASXL2Q76L83 1435 aa16.78■□□□□ 0.28
CACNB3-224ENST00000552812 ABCC5O15440 1437 aa16.78■□□□□ 0.28
CACNB3-224ENST00000552812 ARAP3Q8WWN8 1544 aa16.77■□□□□ 0.27
CACNB3-224ENST00000552812 KCNH8Q96L42 1107 aa16.76■□□□□ 0.27
CACNB3-224ENST00000552812 PLCH2O75038 1416 aa16.76■□□□□ 0.27
CACNB3-224ENST00000552812 ROCK1Q13464 1354 aa16.76■□□□□ 0.27
CACNB3-224ENST00000552812 ARHGAP5Q13017 1502 aa16.75■□□□□ 0.27
CACNB3-224ENST00000552812 CROCC2H7BZ55 1655 aa16.75■□□□□ 0.27
CACNB3-224ENST00000552812 ABCA9Q8IUA7 1624 aa16.75■□□□□ 0.27
CACNB3-224ENST00000552812 NAIPQ13075 1403 aa16.74■□□□□ 0.27
CACNB3-224ENST00000552812 GCC2Q8IWJ2 1684 aa16.74■□□□□ 0.27
CACNB3-224ENST00000552812 ARHGEF5Q12774 1597 aa16.74■□□□□ 0.27
CACNB3-224ENST00000552812 SAMD9LQ8IVG5 1584 aa16.74■□□□□ 0.27
CACNB3-224ENST00000552812 ZNF777Q9ULD5 760 aaPredicted RBP16.74■□□□□ 0.27
CACNB3-224ENST00000552812 PLEKHH2Q8IVE3 1493 aa16.73■□□□□ 0.27
CACNB3-224ENST00000552812 SHANK2Q9UPX8 1470 aa16.73■□□□□ 0.27
CACNB3-224ENST00000552812 SP7Q8TDD2 431 aaPredicted RBP16.73■□□□□ 0.27
CACNB3-224ENST00000552812 DHX57Q6P158 1386 aaKnown RBP16.72■□□□□ 0.27
CACNB3-224ENST00000552812 CLSPNQ9HAW4 1339 aa16.72■□□□□ 0.27
CACNB3-224ENST00000552812 KIAA1107Q9UPP5 1409 aa16.71■□□□□ 0.27
CACNB3-224ENST00000552812 MAPKBP1O60336 1514 aa16.71■□□□□ 0.27
CACNB3-224ENST00000552812 RSPH4AQ5TD94 716 aa16.7■□□□□ 0.26
CACNB3-224ENST00000552812 CYB5RLQ6IPT4 315 aa16.7■□□□□ 0.26
CACNB3-224ENST00000552812 ADGBQ8N7X0 1667 aa16.7■□□□□ 0.26
CACNB3-224ENST00000552812 ADGRL2O95490 1459 aa16.7■□□□□ 0.26
CACNB3-224ENST00000552812 MBD5Q9P267 1494 aa16.7■□□□□ 0.26
CACNB3-224ENST00000552812 EFCAB2Q5VUJ9 269 aa16.68■□□□□ 0.26
CACNB3-224ENST00000552812 CHIC2Q9UKJ5 165 aa16.68■□□□□ 0.26
CACNB3-224ENST00000552812 CCDC141Q6ZP82 1450 aa16.68■□□□□ 0.26
CACNB3-224ENST00000552812 ACIN1Q9UKV3 1341 aaKnown RBP16.67■□□□□ 0.26
CACNB3-224ENST00000552812 SYCP2Q9BX26 1530 aa16.67■□□□□ 0.26
CACNB3-224ENST00000552812 RRP7BPQ9NSQ0 103 aa16.66■□□□□ 0.26
CACNB3-224ENST00000552812 NCOA1Q15788 1441 aa16.66■□□□□ 0.26
CACNB3-224ENST00000552812 ABCC1P33527 1531 aa16.65■□□□□ 0.26
CACNB3-224ENST00000552812 AKT1S1Q96B36 256 aa16.65■□□□□ 0.26
CACNB3-224ENST00000552812 C9orf84Q5VXU9 1444 aa16.65■□□□□ 0.26
CACNB3-224ENST00000552812 ANKRD30AQ9BXX3 1397 aa16.65■□□□□ 0.26
CACNB3-224ENST00000552812 TSPY4P0CV99 314 aa16.64■□□□□ 0.25
CACNB3-224ENST00000552812 TSPY10P0CW01 314 aa16.64■□□□□ 0.25
CACNB3-224ENST00000552812 MAST1Q9Y2H9 1570 aa16.63■□□□□ 0.25
CACNB3-224ENST00000552812 HNRNPMP52272 730 aaKnown RBP eCLIP16.63■□□□□ 0.25
CACNB3-224ENST00000552812 FANCAO15360 1455 aa16.62■□□□□ 0.25
CACNB3-224ENST00000552812 ARHGEF12Q9NZN5 1544 aa16.6■□□□□ 0.25
CACNB3-224ENST00000552812 CFAP74Q9C0B2 1584 aa16.59■□□□□ 0.25
CACNB3-224ENST00000552812 KDM6BO15054 1643 aa16.59■□□□□ 0.25
CACNB3-224ENST00000552812 GLI2P10070 1586 aa16.59■□□□□ 0.25
CACNB3-224ENST00000552812 CD109Q6YHK3 1445 aa16.59■□□□□ 0.25
CACNB3-224ENST00000552812 PLXNC1O60486 1568 aa16.57■□□□□ 0.24
CACNB3-224ENST00000552812 ANKRD50Q9ULJ7 1429 aa16.55■□□□□ 0.24
CACNB3-224ENST00000552812 MAP3K4Q9Y6R4 1608 aa16.55■□□□□ 0.24
CACNB3-224ENST00000552812 ADGRL1O94910 1474 aa16.55■□□□□ 0.24
CACNB3-224ENST00000552812 KIF15Q9NS87 1388 aa16.55■□□□□ 0.24
CACNB3-224ENST00000552812 TRAPPC8Q9Y2L5 1435 aa16.54■□□□□ 0.24
CACNB3-224ENST00000552812 RTEL1-TNFRSF6BF6WH68 1400 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms