RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 TEX14Q8IWB6 1497 aa15.62■□□□□ 0.09
PRIM1-208ENST00000552590 ERICH3Q5RHP9 1530 aa15.61■□□□□ 0.09
PRIM1-208ENST00000552590 ABCC2Q92887 1545 aa15.61■□□□□ 0.09
PRIM1-208ENST00000552590 PTPRMP28827 1452 aa15.61■□□□□ 0.09
PRIM1-208ENST00000552590 WRNQ14191 1432 aaPredicted RBP eCLIP15.6■□□□□ 0.09
PRIM1-208ENST00000552590 MAP3K4Q9Y6R4 1608 aa15.6■□□□□ 0.09
PRIM1-208ENST00000552590 PCF11O94913 1555 aaKnown RBP15.6■□□□□ 0.09
PRIM1-208ENST00000552590 KIF21BO75037 1637 aa15.59■□□□□ 0.09
PRIM1-208ENST00000552590 ZRANB1Q9UGI0 708 aa15.59■□□□□ 0.09
PRIM1-208ENST00000552590 PTPRGP23470 1445 aa15.58■□□□□ 0.09
PRIM1-208ENST00000552590 POTEGQ6S5H5 508 aa15.58■□□□□ 0.08
PRIM1-208ENST00000552590 EPRSP07814 1512 aaKnown RBP15.57■□□□□ 0.08
PRIM1-208ENST00000552590 CUL7Q14999 1698 aa15.55■□□□□ 0.08
PRIM1-208ENST00000552590 POTEB2H3BUK9 544 aa15.55■□□□□ 0.08
PRIM1-208ENST00000552590 HSPA2P54652 639 aa15.54■□□□□ 0.08
PRIM1-208ENST00000552590 GALR2O43603 387 aaPredicted RBP15.52■□□□□ 0.08
PRIM1-208ENST00000552590 ADAMTSL3P82987 1691 aa15.5■□□□□ 0.07
PRIM1-208ENST00000552590 KIAA0586Q9BVV6 1533 aa15.49■□□□□ 0.07
PRIM1-208ENST00000552590 PCDH10Q9P2E7 1040 aa15.48■□□□□ 0.07
PRIM1-208ENST00000552590 TNIKQ9UKE5 1360 aa15.45■□□□□ 0.06
PRIM1-208ENST00000552590 UHRF1BP1LA0JNW5 1464 aa15.44■□□□□ 0.06
PRIM1-208ENST00000552590 UACAQ9BZF9 1416 aa15.41■□□□□ 0.06
PRIM1-208ENST00000552590 MADDQ8WXG6 1647 aa15.4■□□□□ 0.06
PRIM1-208ENST00000552590 KDM5BQ9UGL1 1544 aa15.39■□□□□ 0.05
PRIM1-208ENST00000552590 CD109Q6YHK3 1445 aa15.38■□□□□ 0.05
PRIM1-208ENST00000552590 MAGI3Q5TCQ9 1506 aa15.38■□□□□ 0.05
PRIM1-208ENST00000552590 ZCCHC11Q5TAX3 1644 aaKnown RBP15.37■□□□□ 0.05
PRIM1-208ENST00000552590 BIVM-ERCC5R4GMW8 1640 aa15.37■□□□□ 0.05
PRIM1-208ENST00000552590 CARMIL2Q6F5E8 1435 aa15.37■□□□□ 0.05
PRIM1-208ENST00000552590 BCORL1Q5H9F3 1711 aa15.36■□□□□ 0.05
PRIM1-208ENST00000552590 CREBZFQ9NS37 354 aa15.35■□□□□ 0.05
PRIM1-208ENST00000552590 ARID4BQ4LE39 1312 aaPredicted RBP15.35■□□□□ 0.05
PRIM1-208ENST00000552590 WDR7Q9Y4E6 1490 aa15.34■□□□□ 0.05
PRIM1-208ENST00000552590 RIMS1Q86UR5 1692 aaKnown RBP15.32■□□□□ 0.04
PRIM1-208ENST00000552590 KCNH8Q96L42 1107 aa15.32■□□□□ 0.04
PRIM1-208ENST00000552590 CFAP43Q8NDM7 1665 aa15.3■□□□□ 0.04
PRIM1-208ENST00000552590 PELP1Q8IZL8 1130 aaKnown RBP15.3■□□□□ 0.04
PRIM1-208ENST00000552590 ARAP3Q8WWN8 1544 aa15.29■□□□□ 0.04
PRIM1-208ENST00000552590 PAK3O75914 559 aaPredicted RBP15.27■□□□□ 0.04
PRIM1-208ENST00000552590 PHF12Q96QT6 1004 aa15.27■□□□□ 0.04
PRIM1-208ENST00000552590 RAPGEF3O95398 923 aa15.26■□□□□ 0.03
PRIM1-208ENST00000552590 IGF1RP08069 1367 aa15.23■□□□□ 0.03
PRIM1-208ENST00000552590 DISP1Q96F81 1524 aa15.23■□□□□ 0.03
PRIM1-208ENST00000552590 METRNQ9UJH8 293 aa15.2■□□□□ 0.02
PRIM1-208ENST00000552590 YEATS2Q9ULM3 1422 aa15.2■□□□□ 0.02
PRIM1-208ENST00000552590 STAG3Q9UJ98 1225 aa15.2■□□□□ 0.02
PRIM1-208ENST00000552590 IQGAP2Q13576 1575 aa15.19■□□□□ 0.02
PRIM1-208ENST00000552590 STRCQ7RTU9 1775 aa15.18■□□□□ 0.02
PRIM1-208ENST00000552590 POTEJP0CG39 1038 aa15.18■□□□□ 0.02
PRIM1-208ENST00000552590 MAMSTRQ6ZN01 415 aa15.17■□□□□ 0.02
PRIM1-208ENST00000552590 C7P10643 843 aa15.15■□□□□ 0.02
PRIM1-208ENST00000552590 LCE2DQ5TA82 110 aaPredicted RBP15.15■□□□□ 0.02
PRIM1-208ENST00000552590 ASTLQ6HA08 431 aaPredicted RBP15.14■□□□□ 0.01
PRIM1-208ENST00000552590 SLC39A7Q92504 469 aa15.14■□□□□ 0.01
PRIM1-208ENST00000552590 FAM163AQ96GL9 167 aaPredicted RBP15.12■□□□□ 0.01
PRIM1-208ENST00000552590 LTBP4Q8N2S1 1624 aa15.12■□□□□ 0.01
PRIM1-208ENST00000552590 PHLDB1Q86UU1 1377 aa15.12■□□□□ 0.01
PRIM1-208ENST00000552590 FRMPD1Q5SYB0 1578 aa15.11■□□□□ 0.01
PRIM1-208ENST00000552590 PREX1Q8TCU6 1659 aa15.09■□□□□ 0.01
PRIM1-208ENST00000552590 MED1Q15648 1581 aaPredicted RBP15.09■□□□□ 0.01
PRIM1-208ENST00000552590 IQSEC2Q5JU85 1478 aa15.09■□□□□ 0.01
PRIM1-208ENST00000552590 CARMIL1Q5VZK9 1371 aa15.09■□□□□ 0.01
PRIM1-208ENST00000552590 ATMINO43313 823 aaPredicted RBP15.09■□□□□ 0.01
PRIM1-208ENST00000552590 MLECQ14165 292 aa15.09■□□□□ 0.01
PRIM1-208ENST00000552590 UBAP1LF5GYI3 381 aa15.08■□□□□ 0.01
PRIM1-208ENST00000552590 ARHGEF40Q8TER5 1519 aa15.08■□□□□ 0.01
PRIM1-208ENST00000552590 POGZQ7Z3K3 1410 aa15.07■□□□□ 0
PRIM1-208ENST00000552590 KIAA0556O60303 1618 aa15.07■□□□□ 0
PRIM1-208ENST00000552590 PTPRTO14522 1441 aa15.07■□□□□ 0
PRIM1-208ENST00000552590 KIF27Q86VH2 1401 aa15.06■□□□□ 0
PRIM1-208ENST00000552590 FER1L4A9Z1Z3 1794 aa15.05■□□□□ -0
PRIM1-208ENST00000552590 CEBPAP49715 358 aaPredicted RBP15.05■□□□□ -0
PRIM1-208ENST00000552590 MS4A3Q96HJ5 214 aa15.05■□□□□ -0
PRIM1-208ENST00000552590 UGGT2Q9NYU1 1516 aa15.05■□□□□ -0
PRIM1-208ENST00000552590 SIGLEC1Q9BZZ2 1709 aa15.05■□□□□ -0
PRIM1-208ENST00000552590 TTC37Q6PGP7 1564 aa15.04■□□□□ -0
PRIM1-208ENST00000552590 FANCAO15360 1455 aa15.03■□□□□ -0
PRIM1-208ENST00000552590 NEO1Q92859 1461 aa15.03■□□□□ -0
PRIM1-208ENST00000552590 SCUBE2Q9NQ36 999 aa15.03■□□□□ -0
PRIM1-208ENST00000552590 ARID3CA6NKF2 412 aa15.02■□□□□ -0
PRIM1-208ENST00000552590 ABCA8O94911 1581 aa15□□□□□ -0.01
PRIM1-208ENST00000552590 ABCA9Q8IUA7 1624 aa15□□□□□ -0.01
PRIM1-208ENST00000552590 HSPA1LP34931 641 aa14.99□□□□□ -0.01
PRIM1-208ENST00000552590 UHRF1BP1Q6BDS2 1440 aa14.99□□□□□ -0.01
PRIM1-208ENST00000552590 AKNAQ7Z591 1439 aa14.99□□□□□ -0.01
PRIM1-208ENST00000552590 MNX1P50219 401 aaPredicted RBP14.97□□□□□ -0.01
PRIM1-208ENST00000552590 SETD1BQ9UPS6 1966 aaKnown RBP14.97□□□□□ -0.01
PRIM1-208ENST00000552590 RICTORQ6R327 1708 aa14.96□□□□□ -0.02
PRIM1-208ENST00000552590 DENND4BO75064 1496 aaPredicted RBP14.95□□□□□ -0.02
PRIM1-208ENST00000552590 ARHGEF12Q9NZN5 1544 aa14.92□□□□□ -0.02
PRIM1-208ENST00000552590 ZNF335Q9H4Z2 1342 aaPredicted RBP14.92□□□□□ -0.02
PRIM1-208ENST00000552590 FHOD3Q2V2M9 1422 aa14.92□□□□□ -0.02
PRIM1-208ENST00000552590 ZFYVE16Q7Z3T8 1539 aa14.92□□□□□ -0.02
PRIM1-208ENST00000552590 SRCAPQ6ZRS2 3230 aa14.91□□□□□ -0.02
PRIM1-208ENST00000552590 ATP10BO94823 1461 aa14.91□□□□□ -0.02
PRIM1-208ENST00000552590 PIP4K2BP78356 416 aa14.89□□□□□ -0.03
PRIM1-208ENST00000552590 ATN1P54259 1190 aaPredicted RBP14.89□□□□□ -0.03
PRIM1-208ENST00000552590 EFCAB5A4FU69 1503 aa14.88□□□□□ -0.03
PRIM1-208ENST00000552590 NCOA1Q15788 1441 aa14.87□□□□□ -0.03
PRIM1-208ENST00000552590 CDAN1Q8IWY9 1227 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms