RNA–Protein interactions for RNA: ENST00000552495.1

RITA1-203, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

TSL 2 BASIC

Gene RITA1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-203ENST00000552495 ZNF644Q9H582 1327 aaPredicted RBP33.97■■■■□ 3.03
RITA1-203ENST00000552495 ABCC10Q5T3U5 1492 aa33.96■■■■□ 3.03
RITA1-203ENST00000552495 ABCC2Q92887 1545 aa33.94■■■■□ 3.02
RITA1-203ENST00000552495 ACIN1Q9UKV3 1341 aaKnown RBP33.93■■■■□ 3.02
RITA1-203ENST00000552495 TIMELESSQ9UNS1 1208 aa33.92■■■■□ 3.02
RITA1-203ENST00000552495 CDC42BPAQ5VT25 1732 aa33.9■■■■□ 3.02
RITA1-203ENST00000552495 SIN3AQ96ST3 1273 aa33.85■■■■□ 3.01
RITA1-203ENST00000552495 ZNF777Q9ULD5 760 aaPredicted RBP33.85■■■■□ 3.01
RITA1-203ENST00000552495 NEUROD1Q13562 356 aa33.82■■■■□ 3.01
RITA1-203ENST00000552495 UHRF1BP1LA0JNW5 1464 aa33.81■■■■□ 3
RITA1-203ENST00000552495 KDM6BO15054 1643 aa33.79■■■■□ 3
RITA1-203ENST00000552495 CROCC2H7BZ55 1655 aa33.77■■■■□ 3
RITA1-203ENST00000552495 ADGBQ8N7X0 1667 aa33.77■■■■□ 3
RITA1-203ENST00000552495 TRIM52Q96A61 297 aa33.76■■■■□ 3
RITA1-203ENST00000552495 ADGRL2O95490 1459 aa33.75■■■□□ 2.99
RITA1-203ENST00000552495 NCOA1Q15788 1441 aa33.72■■■□□ 2.99
RITA1-203ENST00000552495 PREX2Q70Z35 1606 aa33.71■■■□□ 2.99
RITA1-203ENST00000552495 SHANK2Q9UPX8 1470 aa33.69■■■□□ 2.98
RITA1-203ENST00000552495 KDM5BQ9UGL1 1544 aa33.69■■■□□ 2.98
RITA1-203ENST00000552495 ANKRD30AQ9BXX3 1397 aa33.68■■■□□ 2.98
RITA1-203ENST00000552495 ZCCHC11Q5TAX3 1644 aaKnown RBP33.68■■■□□ 2.98
RITA1-203ENST00000552495 CDC42BPBQ9Y5S2 1711 aa33.65■■■□□ 2.98
RITA1-203ENST00000552495 MPHOSPH9Q99550 1183 aa33.65■■■□□ 2.98
RITA1-203ENST00000552495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.65■■■□□ 2.98
RITA1-203ENST00000552495 ARHGEF5Q12774 1597 aa33.65■■■□□ 2.98
RITA1-203ENST00000552495 TONSLQ96HA7 1378 aa33.64■■■□□ 2.98
RITA1-203ENST00000552495 TTC37Q6PGP7 1564 aa33.62■■■□□ 2.97
RITA1-203ENST00000552495 DENND4BO75064 1496 aaPredicted RBP33.62■■■□□ 2.97
RITA1-203ENST00000552495 TSPY4P0CV99 314 aa33.61■■■□□ 2.97
RITA1-203ENST00000552495 TSPY10P0CW01 314 aa33.61■■■□□ 2.97
RITA1-203ENST00000552495 PPP1R15AO75807 674 aaPredicted RBP33.6■■■□□ 2.97
RITA1-203ENST00000552495 C9orf84Q5VXU9 1444 aa33.6■■■□□ 2.97
RITA1-203ENST00000552495 RSPH4AQ5TD94 716 aa33.59■■■□□ 2.97
RITA1-203ENST00000552495 SAMD9LQ8IVG5 1584 aa33.59■■■□□ 2.97
RITA1-203ENST00000552495 OSCARQ8IYS5 282 aa33.59■■■□□ 2.97
RITA1-203ENST00000552495 MBD5Q9P267 1494 aa33.57■■■□□ 2.96
RITA1-203ENST00000552495 MYO5CQ9NQX4 1742 aa33.56■■■□□ 2.96
RITA1-203ENST00000552495 ARHGAP5Q13017 1502 aa33.55■■■□□ 2.96
RITA1-203ENST00000552495 HNRNPMP52272 730 aaKnown RBP eCLIP33.54■■■□□ 2.96
RITA1-203ENST00000552495 CCDC141Q6ZP82 1450 aa33.53■■■□□ 2.96
RITA1-203ENST00000552495 KCNH8Q96L42 1107 aa33.53■■■□□ 2.96
RITA1-203ENST00000552495 ANKRD50Q9ULJ7 1429 aa33.51■■■□□ 2.95
RITA1-203ENST00000552495 PLEKHH2Q8IVE3 1493 aa33.5■■■□□ 2.95
RITA1-203ENST00000552495 SLC4A1APQ9BWU0 796 aaKnown RBP33.48■■■□□ 2.95
RITA1-203ENST00000552495 PLCH2O75038 1416 aa33.46■■■□□ 2.95
RITA1-203ENST00000552495 KIAA1107Q9UPP5 1409 aa33.46■■■□□ 2.95
RITA1-203ENST00000552495 SYCP2Q9BX26 1530 aa33.43■■■□□ 2.94
RITA1-203ENST00000552495 PZPP20742 1482 aa33.42■■■□□ 2.94
RITA1-203ENST00000552495 ANKRD30BQ9BXX2 1392 aa33.41■■■□□ 2.94
RITA1-203ENST00000552495 KIF15Q9NS87 1388 aa33.41■■■□□ 2.94
RITA1-203ENST00000552495 MAST1Q9Y2H9 1570 aa33.39■■■□□ 2.94
RITA1-203ENST00000552495 EFCAB2Q5VUJ9 269 aa33.38■■■□□ 2.93
RITA1-203ENST00000552495 WDR7Q9Y4E6 1490 aa33.38■■■□□ 2.93
RITA1-203ENST00000552495 FOXD1Q16676 465 aa33.37■■■□□ 2.93
RITA1-203ENST00000552495 ARAP3Q8WWN8 1544 aa33.34■■■□□ 2.93
RITA1-203ENST00000552495 RPRD2Q5VT52 1461 aaKnown RBP33.33■■■□□ 2.93
RITA1-203ENST00000552495 MIER1Q8N108 512 aa33.31■■■□□ 2.92
RITA1-203ENST00000552495 KDM5DQ9BY66 1539 aa33.3■■■□□ 2.92
RITA1-203ENST00000552495 NUP155O75694 1391 aa33.27■■■□□ 2.92
RITA1-203ENST00000552495 ABCC1P33527 1531 aa33.26■■■□□ 2.91
RITA1-203ENST00000552495 PLXNC1O60486 1568 aa33.25■■■□□ 2.91
RITA1-203ENST00000552495 ARHGEF12Q9NZN5 1544 aa33.25■■■□□ 2.91
RITA1-203ENST00000552495 PKD2Q13563 968 aa33.23■■■□□ 2.91
RITA1-203ENST00000552495 ASXL2Q76L83 1435 aa33.21■■■□□ 2.91
RITA1-203ENST00000552495 ABCA9Q8IUA7 1624 aa33.21■■■□□ 2.91
RITA1-203ENST00000552495 NPM1P06748 294 aaKnown RBP eCLIP33.21■■■□□ 2.91
RITA1-203ENST00000552495 L3MBTL2Q969R5 705 aa33.2■■■□□ 2.91
RITA1-203ENST00000552495 TEX14Q8IWB6 1497 aa33.15■■■□□ 2.9
RITA1-203ENST00000552495 DUOX2Q9NRD8 1548 aa33.15■■■□□ 2.9
RITA1-203ENST00000552495 TRAPPC8Q9Y2L5 1435 aa33.12■■■□□ 2.89
RITA1-203ENST00000552495 FANCAO15360 1455 aa33.11■■■□□ 2.89
RITA1-203ENST00000552495 UNC13BO14795 1591 aa33.1■■■□□ 2.89
RITA1-203ENST00000552495 ERBINQ96RT1 1412 aa33.09■■■□□ 2.89
RITA1-203ENST00000552495 FAM135AQ9P2D6 1515 aa33.08■■■□□ 2.89
RITA1-203ENST00000552495 RTEL1-TNFRSF6BF6WH68 1400 aa33.08■■■□□ 2.89
RITA1-203ENST00000552495 SPAG9O60271 1321 aaKnown RBP33.04■■■□□ 2.88
RITA1-203ENST00000552495 CENPBP07199 599 aaPredicted RBP33.03■■■□□ 2.88
RITA1-203ENST00000552495 HIRIP3Q9BW71 556 aaPredicted RBP33.03■■■□□ 2.88
RITA1-203ENST00000552495 ADGRL1O94910 1474 aa32.98■■■□□ 2.87
RITA1-203ENST00000552495 ZFYVE16Q7Z3T8 1539 aa32.98■■■□□ 2.87
RITA1-203ENST00000552495 AFAP1Q8N556 730 aa32.98■■■□□ 2.87
RITA1-203ENST00000552495 DDX10Q13206 875 aaKnown RBP32.97■■■□□ 2.87
RITA1-203ENST00000552495 IQGAP3Q86VI3 1631 aa32.97■■■□□ 2.87
RITA1-203ENST00000552495 EIF4G2P78344 907 aaKnown RBP eCLIP32.96■■■□□ 2.87
RITA1-203ENST00000552495 MAGI2Q86UL8 1455 aa32.96■■■□□ 2.87
RITA1-203ENST00000552495 SCAPERQ9BY12 1400 aa32.94■■■□□ 2.86
RITA1-203ENST00000552495 NBPF8Q3BBV2 869 aa32.93■■■□□ 2.86
RITA1-203ENST00000552495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.93■■■□□ 2.86
RITA1-203ENST00000552495 HSPA5P11021 654 aaKnown RBP32.91■■■□□ 2.86
RITA1-203ENST00000552495 INO80Q9ULG1 1556 aaPredicted RBP32.9■■■□□ 2.86
RITA1-203ENST00000552495 ATP7AQ04656 1500 aa32.89■■■□□ 2.86
RITA1-203ENST00000552495 CFAP74Q9C0B2 1584 aa32.89■■■□□ 2.85
RITA1-203ENST00000552495 CD109Q6YHK3 1445 aa32.88■■■□□ 2.85
RITA1-203ENST00000552495 YTHDC1Q96MU7 727 aaKnown RBP32.84■■■□□ 2.85
RITA1-203ENST00000552495 CCDC144AA2RUR9 1427 aa32.82■■■□□ 2.85
RITA1-203ENST00000552495 UHRF1BP1Q6BDS2 1440 aa32.81■■■□□ 2.84
RITA1-203ENST00000552495 ZNF518AQ6AHZ1 1483 aa32.8■■■□□ 2.84
RITA1-203ENST00000552495 MYT1LQ9UL68 1186 aa32.78■■■□□ 2.84
RITA1-203ENST00000552495 ATP10AO60312 1499 aa32.77■■■□□ 2.84
RITA1-203ENST00000552495 DEPDC5O75140 1603 aa32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms