RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 CFDP1Q9UEE9 299 aaPredicted RBP16.04■□□□□ 0.16
PFDN5-216ENST00000552341 ZCCHC11Q5TAX3 1644 aaKnown RBP16.04■□□□□ 0.16
PFDN5-216ENST00000552341 GCC2Q8IWJ2 1684 aa16.04■□□□□ 0.16
PFDN5-216ENST00000552341 CDC42BPBQ9Y5S2 1711 aa16■□□□□ 0.15
PFDN5-216ENST00000552341 CHIC2Q9UKJ5 165 aa16■□□□□ 0.15
PFDN5-216ENST00000552341 ROCK1Q13464 1354 aa16■□□□□ 0.15
PFDN5-216ENST00000552341 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.99■□□□□ 0.153e-9■□□□□ 10.9
PFDN5-216ENST00000552341 PREX2Q70Z35 1606 aa15.99■□□□□ 0.15
PFDN5-216ENST00000552341 TTC37Q6PGP7 1564 aa15.99■□□□□ 0.15
PFDN5-216ENST00000552341 KDM6BO15054 1643 aa15.99■□□□□ 0.15
PFDN5-216ENST00000552341 CROCC2H7BZ55 1655 aa15.99■□□□□ 0.15
PFDN5-216ENST00000552341 RRP7BPQ9NSQ0 103 aa15.98■□□□□ 0.15
PFDN5-216ENST00000552341 ZNF777Q9ULD5 760 aaPredicted RBP15.95■□□□□ 0.14
PFDN5-216ENST00000552341 SAMD9LQ8IVG5 1584 aa15.94■□□□□ 0.14
PFDN5-216ENST00000552341 ADGRL2O95490 1459 aa15.94■□□□□ 0.14
PFDN5-216ENST00000552341 ADGBQ8N7X0 1667 aa15.94■□□□□ 0.14
PFDN5-216ENST00000552341 MBD5Q9P267 1494 aa15.93■□□□□ 0.14
PFDN5-216ENST00000552341 NCOA1Q15788 1441 aa15.92■□□□□ 0.14
PFDN5-216ENST00000552341 ARHGEF5Q12774 1597 aa15.92■□□□□ 0.14
PFDN5-216ENST00000552341 MYO5CQ9NQX4 1742 aa15.92■□□□□ 0.14
PFDN5-216ENST00000552341 SHANK2Q9UPX8 1470 aa15.91■□□□□ 0.14
PFDN5-216ENST00000552341 DENND4BO75064 1496 aaPredicted RBP15.9■□□□□ 0.14
PFDN5-216ENST00000552341 KCNH8Q96L42 1107 aa15.89■□□□□ 0.13
PFDN5-216ENST00000552341 WDR7Q9Y4E6 1490 aa15.88■□□□□ 0.13
PFDN5-216ENST00000552341 PELP1Q8IZL8 1130 aaKnown RBP15.87■□□□□ 0.13
PFDN5-216ENST00000552341 ARHGAP5Q13017 1502 aa15.87■□□□□ 0.13
PFDN5-216ENST00000552341 PLCH2O75038 1416 aa15.87■□□□□ 0.13
PFDN5-216ENST00000552341 HNRNPMP52272 730 aaKnown RBP eCLIP15.86■□□□□ 0.13
PFDN5-216ENST00000552341 SIN3AQ96ST3 1273 aa15.86■□□□□ 0.13
PFDN5-216ENST00000552341 C9orf84Q5VXU9 1444 aa15.86■□□□□ 0.13
PFDN5-216ENST00000552341 CCDC141Q6ZP82 1450 aa15.84■□□□□ 0.13
PFDN5-216ENST00000552341 SYCP2Q9BX26 1530 aa15.84■□□□□ 0.13
PFDN5-216ENST00000552341 ANKRD30AQ9BXX3 1397 aa15.84■□□□□ 0.13
PFDN5-216ENST00000552341 KIAA1107Q9UPP5 1409 aa15.84■□□□□ 0.13
PFDN5-216ENST00000552341 ARAP3Q8WWN8 1544 aa15.84■□□□□ 0.13
PFDN5-216ENST00000552341 ACIN1Q9UKV3 1341 aaKnown RBP15.83■□□□□ 0.13
PFDN5-216ENST00000552341 ASXL2Q76L83 1435 aa15.83■□□□□ 0.12
PFDN5-216ENST00000552341 ARHGEF12Q9NZN5 1544 aa15.82■□□□□ 0.12
PFDN5-216ENST00000552341 ABCA9Q8IUA7 1624 aa15.82■□□□□ 0.12
PFDN5-216ENST00000552341 RSPH4AQ5TD94 716 aa15.82■□□□□ 0.12
PFDN5-216ENST00000552341 PLEKHH2Q8IVE3 1493 aa15.81■□□□□ 0.12
PFDN5-216ENST00000552341 MAST1Q9Y2H9 1570 aa15.81■□□□□ 0.12
PFDN5-216ENST00000552341 TSPY4P0CV99 314 aa15.8■□□□□ 0.12
PFDN5-216ENST00000552341 TSPY10P0CW01 314 aa15.8■□□□□ 0.12
PFDN5-216ENST00000552341 TIMELESSQ9UNS1 1208 aa15.8■□□□□ 0.12
PFDN5-216ENST00000552341 ZNF316A6NFI3 1004 aaPredicted RBP15.8■□□□□ 0.12
PFDN5-216ENST00000552341 TRIM52Q96A61 297 aa15.8■□□□□ 0.12
PFDN5-216ENST00000552341 MPHOSPH9Q99550 1183 aa15.8■□□□□ 0.12
PFDN5-216ENST00000552341 ANKRD50Q9ULJ7 1429 aa15.79■□□□□ 0.12
PFDN5-216ENST00000552341 ABCC1P33527 1531 aa15.79■□□□□ 0.12
PFDN5-216ENST00000552341 NEUROD1Q13562 356 aa15.78■□□□□ 0.12
PFDN5-216ENST00000552341 EFCAB2Q5VUJ9 269 aa15.78■□□□□ 0.12
PFDN5-216ENST00000552341 PZPP20742 1482 aa15.78■□□□□ 0.12
PFDN5-216ENST00000552341 KIF15Q9NS87 1388 aa15.76■□□□□ 0.11
PFDN5-216ENST00000552341 PLXNC1O60486 1568 aa15.75■□□□□ 0.11
PFDN5-216ENST00000552341 RIMBP3CA6NJZ7 1639 aa15.73■□□□□ 0.11
PFDN5-216ENST00000552341 RIMBP3BA6NNM3 1639 aa15.73■□□□□ 0.11
PFDN5-216ENST00000552341 RIMBP3Q9UFD9 1639 aa15.73■□□□□ 0.11
PFDN5-216ENST00000552341 NPM1P06748 294 aaKnown RBP eCLIP15.73■□□□□ 0.11
PFDN5-216ENST00000552341 TRAPPC8Q9Y2L5 1435 aa15.73■□□□□ 0.11
PFDN5-216ENST00000552341 ANKRD30BQ9BXX2 1392 aa15.72■□□□□ 0.11
PFDN5-216ENST00000552341 AEBP2Q6ZN18 517 aaPredicted RBP15.72■□□□□ 0.11
PFDN5-216ENST00000552341 KDM5DQ9BY66 1539 aa15.72■□□□□ 0.11
PFDN5-216ENST00000552341 FANCAO15360 1455 aa15.71■□□□□ 0.11
PFDN5-216ENST00000552341 PPP1R15AO75807 674 aaPredicted RBP15.71■□□□□ 0.11
PFDN5-216ENST00000552341 FOXD1Q16676 465 aa15.71■□□□□ 0.1
PFDN5-216ENST00000552341 SLC4A1APQ9BWU0 796 aaKnown RBP15.7■□□□□ 0.1
PFDN5-216ENST00000552341 TONSLQ96HA7 1378 aa15.68■□□□□ 0.1
PFDN5-216ENST00000552341 DIEXFQ68CQ4 756 aaKnown RBP15.67■□□□□ 0.1
PFDN5-216ENST00000552341 DUOX2Q9NRD8 1548 aa15.66■□□□□ 0.1
PFDN5-216ENST00000552341 NUP155O75694 1391 aa15.66■□□□□ 0.1
PFDN5-216ENST00000552341 RTEL1-TNFRSF6BF6WH68 1400 aa15.66■□□□□ 0.1
PFDN5-216ENST00000552341 RPRD2Q5VT52 1461 aaKnown RBP15.66■□□□□ 0.1
PFDN5-216ENST00000552341 ZFYVE16Q7Z3T8 1539 aa15.66■□□□□ 0.1
PFDN5-216ENST00000552341 UNC13BO14795 1591 aa15.66■□□□□ 0.1
PFDN5-216ENST00000552341 CYB5RLQ6IPT4 315 aa15.66■□□□□ 0.1
PFDN5-216ENST00000552341 AFAP1Q8N556 730 aa15.65■□□□□ 0.1
PFDN5-216ENST00000552341 ADGRL1O94910 1474 aa15.64■□□□□ 0.09
PFDN5-216ENST00000552341 INO80Q9ULG1 1556 aaPredicted RBP15.64■□□□□ 0.09
PFDN5-216ENST00000552341 CD109Q6YHK3 1445 aa15.63■□□□□ 0.09
PFDN5-216ENST00000552341 PKD2Q13563 968 aa15.63■□□□□ 0.09
PFDN5-216ENST00000552341 ERBINQ96RT1 1412 aa15.62■□□□□ 0.09
PFDN5-216ENST00000552341 SCAPERQ9BY12 1400 aa15.62■□□□□ 0.09
PFDN5-216ENST00000552341 FAM135AQ9P2D6 1515 aa15.61■□□□□ 0.09
PFDN5-216ENST00000552341 MAGI2Q86UL8 1455 aa15.61■□□□□ 0.09
PFDN5-216ENST00000552341 SPAG9O60271 1321 aaKnown RBP15.61■□□□□ 0.09
PFDN5-216ENST00000552341 CFAP74Q9C0B2 1584 aa15.6■□□□□ 0.09
PFDN5-216ENST00000552341 ATP7AQ04656 1500 aa15.6■□□□□ 0.09
PFDN5-216ENST00000552341 TEX14Q8IWB6 1497 aa15.6■□□□□ 0.09
PFDN5-216ENST00000552341 IQGAP3Q86VI3 1631 aa15.59■□□□□ 0.09
PFDN5-216ENST00000552341 MAP3K4Q9Y6R4 1608 aa15.58■□□□□ 0.08
PFDN5-216ENST00000552341 L3MBTL2Q969R5 705 aa15.58■□□□□ 0.08
PFDN5-216ENST00000552341 GLI2P10070 1586 aa15.57■□□□□ 0.08
PFDN5-216ENST00000552341 KIDINS220Q9ULH0 1771 aa15.57■□□□□ 0.08
PFDN5-216ENST00000552341 ZNF518AQ6AHZ1 1483 aa15.56■□□□□ 0.08
PFDN5-216ENST00000552341 KDM5CP41229 1560 aa15.55■□□□□ 0.08
PFDN5-216ENST00000552341 NEO1Q92859 1461 aa15.55■□□□□ 0.08
PFDN5-216ENST00000552341 DEPDC5O75140 1603 aa15.55■□□□□ 0.08
PFDN5-216ENST00000552341 POGZQ7Z3K3 1410 aa15.54■□□□□ 0.08
PFDN5-216ENST00000552341 DIP2BQ9P265 1576 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms