RNA–Protein interactions for RNA: ENST00000551448.5

NPIPB12-207, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 3

Gene NPIPB12, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-207ENST00000551448 ZMYM4Q5VZL5 1548 aa13.39□□□□□ -0.27
NPIPB12-207ENST00000551448 DENND4BO75064 1496 aaPredicted RBP13.38□□□□□ -0.27
NPIPB12-207ENST00000551448 AMER1Q5JTC6 1135 aaPredicted RBP13.38□□□□□ -0.27
NPIPB12-207ENST00000551448 FHOD3Q2V2M9 1422 aa13.38□□□□□ -0.27
NPIPB12-207ENST00000551448 AKNAQ7Z591 1439 aa13.38□□□□□ -0.27
NPIPB12-207ENST00000551448 DMRT2Q9Y5R5 561 aa13.37□□□□□ -0.27
NPIPB12-207ENST00000551448 ZFYVE16Q7Z3T8 1539 aa13.37□□□□□ -0.27
NPIPB12-207ENST00000551448 STRCQ7RTU9 1775 aa13.36□□□□□ -0.27
NPIPB12-207ENST00000551448 EFCAB5A4FU69 1503 aa13.36□□□□□ -0.27
NPIPB12-207ENST00000551448 CFAP74Q9C0B2 1584 aa13.36□□□□□ -0.27
NPIPB12-207ENST00000551448 LTBP4Q8N2S1 1624 aa13.35□□□□□ -0.27
NPIPB12-207ENST00000551448 RAPGEF6Q8TEU7 1601 aa13.34□□□□□ -0.27
NPIPB12-207ENST00000551448 MLECQ14165 292 aa13.33□□□□□ -0.28
NPIPB12-207ENST00000551448 ARHGEF12Q9NZN5 1544 aa13.33□□□□□ -0.28
NPIPB12-207ENST00000551448 EHMT2Q96KQ7 1210 aa13.32□□□□□ -0.28
NPIPB12-207ENST00000551448 IQSEC2Q5JU85 1478 aa13.31□□□□□ -0.28
NPIPB12-207ENST00000551448 MAGI2Q86UL8 1455 aa13.31□□□□□ -0.28
NPIPB12-207ENST00000551448 SAMD9Q5K651 1589 aa13.31□□□□□ -0.28
NPIPB12-207ENST00000551448 PTPRTO14522 1441 aa13.3□□□□□ -0.28
NPIPB12-207ENST00000551448 CEBPAP49715 358 aaPredicted RBP13.3□□□□□ -0.28
NPIPB12-207ENST00000551448 HECW1Q76N89 1606 aa13.3□□□□□ -0.28
NPIPB12-207ENST00000551448 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
NPIPB12-207ENST00000551448 PRXQ9BXM0 1461 aa13.29□□□□□ -0.28
NPIPB12-207ENST00000551448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.27□□□□□ -0.29
NPIPB12-207ENST00000551448 MED1Q15648 1581 aaPredicted RBP13.26□□□□□ -0.29
NPIPB12-207ENST00000551448 UHRF1BP1Q6BDS2 1440 aa13.26□□□□□ -0.29
NPIPB12-207ENST00000551448 P3H3Q8IVL6 736 aa13.26□□□□□ -0.29
NPIPB12-207ENST00000551448 HOMEZQ8IX15 550 aa13.26□□□□□ -0.29
NPIPB12-207ENST00000551448 UBAP1LF5GYI3 381 aa13.25□□□□□ -0.29
NPIPB12-207ENST00000551448 C9orf84Q5VXU9 1444 aa13.23□□□□□ -0.29
NPIPB12-207ENST00000551448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.23□□□□□ -0.29
NPIPB12-207ENST00000551448 HNRNPUL2Q1KMD3 747 aaKnown RBP13.23□□□□□ -0.29
NPIPB12-207ENST00000551448 ATP10AO60312 1499 aa13.22□□□□□ -0.29
NPIPB12-207ENST00000551448 CENPBP07199 599 aaPredicted RBP13.2□□□□□ -0.3
NPIPB12-207ENST00000551448 HSPA1LP34931 641 aa13.19□□□□□ -0.3
NPIPB12-207ENST00000551448 SCAPERQ9BY12 1400 aa13.19□□□□□ -0.3
NPIPB12-207ENST00000551448 C3P01024 1663 aa13.18□□□□□ -0.3
NPIPB12-207ENST00000551448 SETD1BQ9UPS6 1966 aaKnown RBP13.18□□□□□ -0.3
NPIPB12-207ENST00000551448 ZNF335Q9H4Z2 1342 aaPredicted RBP13.17□□□□□ -0.3
NPIPB12-207ENST00000551448 NCOA1Q15788 1441 aa13.17□□□□□ -0.3
NPIPB12-207ENST00000551448 UBE2Q2Q8WVN8 375 aa13.17□□□□□ -0.3
NPIPB12-207ENST00000551448 PLEKHD1A6NEE1 506 aa13.16□□□□□ -0.3
NPIPB12-207ENST00000551448 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
NPIPB12-207ENST00000551448 TIMELESSQ9UNS1 1208 aa13.15□□□□□ -0.3
NPIPB12-207ENST00000551448 HRCP23327 699 aa13.14□□□□□ -0.31
NPIPB12-207ENST00000551448 KDM5CP41229 1560 aa13.14□□□□□ -0.31
NPIPB12-207ENST00000551448 REREQ9P2R6 1566 aa13.14□□□□□ -0.31
NPIPB12-207ENST00000551448 DIP2CQ9Y2E4 1556 aa13.14□□□□□ -0.31
NPIPB12-207ENST00000551448 PLCH2O75038 1416 aa13.13□□□□□ -0.31
NPIPB12-207ENST00000551448 MSH5O43196 834 aa13.12□□□□□ -0.31
NPIPB12-207ENST00000551448 PPP6R1Q9UPN7 881 aa13.12□□□□□ -0.31
NPIPB12-207ENST00000551448 MYO5CQ9NQX4 1742 aa13.12□□□□□ -0.31
NPIPB12-207ENST00000551448 ZNF518AQ6AHZ1 1483 aa13.11□□□□□ -0.31
NPIPB12-207ENST00000551448 ADRA2BP18089 450 aa13.11□□□□□ -0.31
NPIPB12-207ENST00000551448 CDK13Q14004 1512 aaKnown RBP13.11□□□□□ -0.31
NPIPB12-207ENST00000551448 ABCA6Q8N139 1617 aa13.1□□□□□ -0.31
NPIPB12-207ENST00000551448 TRAPPC8Q9Y2L5 1435 aa13.1□□□□□ -0.31
NPIPB12-207ENST00000551448 SCAF1Q9H7N4 1312 aaKnown RBP13.1□□□□□ -0.31
NPIPB12-207ENST00000551448 CAMSAP1Q5T5Y3 1602 aa13.1□□□□□ -0.31
NPIPB12-207ENST00000551448 PIP4K2BP78356 416 aa13.09□□□□□ -0.31
NPIPB12-207ENST00000551448 AGLP35573 1532 aa13.08□□□□□ -0.31
NPIPB12-207ENST00000551448 NCKAP5LQ9HCH0 1330 aa13.08□□□□□ -0.32
NPIPB12-207ENST00000551448 KIF14Q15058 1648 aa13.04□□□□□ -0.32
NPIPB12-207ENST00000551448 EFCAB2Q5VUJ9 269 aa13.04□□□□□ -0.32
NPIPB12-207ENST00000551448 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
NPIPB12-207ENST00000551448 PODXL2Q9NZ53 605 aa13.04□□□□□ -0.32
NPIPB12-207ENST00000551448 MROH2AA6NES4 1674 aa13.04□□□□□ -0.32
NPIPB12-207ENST00000551448 ZNF142P52746 1687 aaPredicted RBP13.04□□□□□ -0.32
NPIPB12-207ENST00000551448 CNTLNQ9NXG0 1405 aa13.04□□□□□ -0.32
NPIPB12-207ENST00000551448 MLH3Q9UHC1 1453 aa13.04□□□□□ -0.32
NPIPB12-207ENST00000551448 RGS17Q9UGC6 210 aaPredicted RBP13.03□□□□□ -0.32
NPIPB12-207ENST00000551448 NPATQ14207 1427 aa13.03□□□□□ -0.32
NPIPB12-207ENST00000551448 ARHGAP5Q13017 1502 aa13.03□□□□□ -0.32
NPIPB12-207ENST00000551448 MYO3AQ8NEV4 1616 aa13.02□□□□□ -0.32
NPIPB12-207ENST00000551448 PLEKHG5O94827 1062 aa13.02□□□□□ -0.33
NPIPB12-207ENST00000551448 PLA2R1Q13018 1463 aa13.02□□□□□ -0.33
NPIPB12-207ENST00000551448 AFAP1Q8N556 730 aa13.01□□□□□ -0.33
NPIPB12-207ENST00000551448 TCOF1Q13428 1488 aaKnown RBP13.01□□□□□ -0.33
NPIPB12-207ENST00000551448 ESF1Q9H501 851 aaKnown RBP13□□□□□ -0.33
NPIPB12-207ENST00000551448 SRCAPQ6ZRS2 3230 aa13□□□□□ -0.33
NPIPB12-207ENST00000551448 TOM1O60784 492 aa12.99□□□□□ -0.33
NPIPB12-207ENST00000551448 CEP170BQ9Y4F5 1589 aaPredicted RBP12.98□□□□□ -0.33
NPIPB12-207ENST00000551448 ABCC1P33527 1531 aa12.98□□□□□ -0.33
NPIPB12-207ENST00000551448 SUPT6HQ7KZ85 1726 aaKnown RBP12.98□□□□□ -0.33
NPIPB12-207ENST00000551448 ITSN2Q9NZM3 1697 aa12.98□□□□□ -0.33
NPIPB12-207ENST00000551448 KIDINS220Q9ULH0 1771 aa12.97□□□□□ -0.33
NPIPB12-207ENST00000551448 MYT1LQ9UL68 1186 aa12.97□□□□□ -0.33
NPIPB12-207ENST00000551448 CDC42BPBQ9Y5S2 1711 aa12.96□□□□□ -0.33
NPIPB12-207ENST00000551448 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
NPIPB12-207ENST00000551448 PREX2Q70Z35 1606 aa12.95□□□□□ -0.34
NPIPB12-207ENST00000551448 PKD2Q13563 968 aa12.95□□□□□ -0.34
NPIPB12-207ENST00000551448 TROQ12816 1431 aaPredicted RBP12.95□□□□□ -0.34
NPIPB12-207ENST00000551448 ALKQ9UM73 1620 aa12.94□□□□□ -0.34
NPIPB12-207ENST00000551448 CPS1P31327 1500 aa12.93□□□□□ -0.34
NPIPB12-207ENST00000551448 CLTCQ00610 1675 aaKnown RBP12.93□□□□□ -0.34
NPIPB12-207ENST00000551448 ZMYM3Q14202 1370 aa12.93□□□□□ -0.34
NPIPB12-207ENST00000551448 TULP1O00294 542 aaPredicted RBP12.92□□□□□ -0.34
NPIPB12-207ENST00000551448 CLIP1P30622 1438 aa12.91□□□□□ -0.34
NPIPB12-207ENST00000551448 PTPRKQ15262 1439 aa12.91□□□□□ -0.34
NPIPB12-207ENST00000551448 POLR1AO95602 1720 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms