RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	ARAP3	Q8WWN8	1544 aa		10.91	□□□□□ -0.66
RACGAP1-223	ENST00000551260	SIGLEC1	Q9BZZ2	1709 aa		10.91	□□□□□ -0.66
RACGAP1-223	ENST00000551260	KCNH8	Q96L42	1107 aa		10.9	□□□□□ -0.66
RACGAP1-223	ENST00000551260	FRMPD1	Q5SYB0	1578 aa		10.89	□□□□□ -0.67
RACGAP1-223	ENST00000551260	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.88	□□□□□ -0.67
RACGAP1-223	ENST00000551260	FER1L4	A9Z1Z3	1794 aa		10.88	□□□□□ -0.67
RACGAP1-223	ENST00000551260	RBM42	Q9BTD8	480 aa	Known RBP	10.87	□□□□□ -0.67
RACGAP1-223	ENST00000551260	PREX1	Q8TCU6	1659 aa		10.87	□□□□□ -0.67
RACGAP1-223	ENST00000551260	IGF1R	P08069	1367 aa		10.87	□□□□□ -0.67
RACGAP1-223	ENST00000551260	KIAA0556	O60303	1618 aa		10.86	□□□□□ -0.67
RACGAP1-223	ENST00000551260	RAPGEF3	O95398	923 aa		10.85	□□□□□ -0.67
RACGAP1-223	ENST00000551260	ARHGEF40	Q8TER5	1519 aa		10.82	□□□□□ -0.68
RACGAP1-223	ENST00000551260	RICTOR	Q6R327	1708 aa		10.81	□□□□□ -0.68
RACGAP1-223	ENST00000551260	ABCA9	Q8IUA7	1624 aa		10.8	□□□□□ -0.68
RACGAP1-223	ENST00000551260	LTBP4	Q8N2S1	1624 aa		10.8	□□□□□ -0.68
RACGAP1-223	ENST00000551260	UGGT2	Q9NYU1	1516 aa		10.79	□□□□□ -0.68
RACGAP1-223	ENST00000551260	TTC37	Q6PGP7	1564 aa		10.79	□□□□□ -0.68
RACGAP1-223	ENST00000551260	CARMIL1	Q5VZK9	1371 aa		10.78	□□□□□ -0.68
RACGAP1-223	ENST00000551260	ABCA8	O94911	1581 aa		10.78	□□□□□ -0.68
RACGAP1-223	ENST00000551260	MED1	Q15648	1581 aa	Predicted RBP	10.78	□□□□□ -0.68
RACGAP1-223	ENST00000551260	YEATS2	Q9ULM3	1422 aa		10.77	□□□□□ -0.68
RACGAP1-223	ENST00000551260	SETD1B	Q9UPS6	1966 aa	Known RBP	10.77	□□□□□ -0.69
RACGAP1-223	ENST00000551260	KIF27	Q86VH2	1401 aa		10.76	□□□□□ -0.69
RACGAP1-223	ENST00000551260	SPDYE2B	A6NHP3	402 aa		10.75	□□□□□ -0.69
RACGAP1-223	ENST00000551260	SPDYE6	P0CI01	402 aa		10.75	□□□□□ -0.69
RACGAP1-223	ENST00000551260	SPDYE2	Q495Y8	402 aa		10.75	□□□□□ -0.69
RACGAP1-223	ENST00000551260	CTTNBP2	Q8WZ74	1663 aa		10.74	□□□□□ -0.69
RACGAP1-223	ENST00000551260	MLEC	Q14165	292 aa		10.74	□□□□□ -0.69
RACGAP1-223	ENST00000551260	ARID3C	A6NKF2	412 aa		10.73	□□□□□ -0.69
RACGAP1-223	ENST00000551260	FANCA	O15360	1455 aa		10.73	□□□□□ -0.69
RACGAP1-223	ENST00000551260	AKT1S1	Q96B36	256 aa		10.72	□□□□□ -0.69
RACGAP1-223	ENST00000551260	NEO1	Q92859	1461 aa		10.72	□□□□□ -0.69
RACGAP1-223	ENST00000551260	CEBPA	P49715	358 aa	Predicted RBP	10.71	□□□□□ -0.69
RACGAP1-223	ENST00000551260	IQSEC2	Q5JU85	1478 aa		10.71	□□□□□ -0.69
RACGAP1-223	ENST00000551260	PHLDB1	Q86UU1	1377 aa		10.71	□□□□□ -0.69
RACGAP1-223	ENST00000551260	POGZ	Q7Z3K3	1410 aa		10.7	□□□□□ -0.7
RACGAP1-223	ENST00000551260	PTPRT	O14522	1441 aa		10.69	□□□□□ -0.7
RACGAP1-223	ENST00000551260	ZFYVE16	Q7Z3T8	1539 aa		10.68	□□□□□ -0.7
RACGAP1-223	ENST00000551260	ZNF692	Q9BU19	519 aa	Predicted RBP	10.68	□□□□□ -0.7
RACGAP1-223	ENST00000551260	SSUH2	Q9Y2M2	353 aa		10.68	□□□□□ -0.7
RACGAP1-223	ENST00000551260	C3	P01024	1663 aa		10.67	□□□□□ -0.7
RACGAP1-223	ENST00000551260	UBAP1L	F5GYI3	381 aa		10.67	□□□□□ -0.7
RACGAP1-223	ENST00000551260	ARHGEF12	Q9NZN5	1544 aa		10.67	□□□□□ -0.7
RACGAP1-223	ENST00000551260	ATP10B	O94823	1461 aa		10.67	□□□□□ -0.7
RACGAP1-223	ENST00000551260	AKNA	Q7Z591	1439 aa		10.67	□□□□□ -0.7
RACGAP1-223	ENST00000551260	ZMYM4	Q5VZL5	1548 aa		10.66	□□□□□ -0.7
RACGAP1-223	ENST00000551260	UHRF1BP1	Q6BDS2	1440 aa		10.66	□□□□□ -0.7
RACGAP1-223	ENST00000551260	EFCAB5	A4FU69	1503 aa		10.65	□□□□□ -0.7
RACGAP1-223	ENST00000551260	DENND4B	O75064	1496 aa	Predicted RBP	10.65	□□□□□ -0.7
RACGAP1-223	ENST00000551260	HECW1	Q76N89	1606 aa		10.65	□□□□□ -0.7
RACGAP1-223	ENST00000551260	REM2	Q8IYK8	340 aa	Predicted RBP	10.64	□□□□□ -0.71
RACGAP1-223	ENST00000551260	FHOD3	Q2V2M9	1422 aa		10.63	□□□□□ -0.71
RACGAP1-223	ENST00000551260	SUPT6H	Q7KZ85	1726 aa	Known RBP	10.63	□□□□□ -0.71
RACGAP1-223	ENST00000551260	RAPGEF2	Q9Y4G8	1499 aa		10.62	□□□□□ -0.71
RACGAP1-223	ENST00000551260	CFAP74	Q9C0B2	1584 aa		10.62	□□□□□ -0.71
RACGAP1-223	ENST00000551260	SUPT5H	O00267	1087 aa	Known RBP	10.62	□□□□□ -0.71
RACGAP1-223	ENST00000551260	HSPA1L	P34931	641 aa		10.62	□□□□□ -0.71
RACGAP1-223	ENST00000551260	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.6	□□□□□ -0.71
RACGAP1-223	ENST00000551260	GOLGA3	Q08378	1498 aa		10.6	□□□□□ -0.71
RACGAP1-223	ENST00000551260	SPDYE4	A6NLX3	237 aa		10.59	□□□□□ -0.71
RACGAP1-223	ENST00000551260	NCOA1	Q15788	1441 aa		10.58	□□□□□ -0.72
RACGAP1-223	ENST00000551260	CAMSAP1	Q5T5Y3	1602 aa		10.58	□□□□□ -0.72
RACGAP1-223	ENST00000551260	RAPGEF6	Q8TEU7	1601 aa		10.57	□□□□□ -0.72
RACGAP1-223	ENST00000551260	PIP4K2B	P78356	416 aa		10.56	□□□□□ -0.72
RACGAP1-223	ENST00000551260	SETD1A	O15047	1707 aa	Known RBP	10.55	□□□□□ -0.72
RACGAP1-223	ENST00000551260	MAGI2	Q86UL8	1455 aa		10.55	□□□□□ -0.72
RACGAP1-223	ENST00000551260	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.54	□□□□□ -0.72
RACGAP1-223	ENST00000551260	C9orf84	Q5VXU9	1444 aa		10.54	□□□□□ -0.72
RACGAP1-223	ENST00000551260	P3H3	Q8IVL6	736 aa		10.54	□□□□□ -0.72
RACGAP1-223	ENST00000551260	ATP10A	O60312	1499 aa		10.54	□□□□□ -0.72
RACGAP1-223	ENST00000551260	PITPNM1	O00562	1244 aa		10.53	□□□□□ -0.72
RACGAP1-223	ENST00000551260	NCKAP5L	Q9HCH0	1330 aa		10.53	□□□□□ -0.72
RACGAP1-223	ENST00000551260	CHRDL2	Q6WN34	429 aa		10.52	□□□□□ -0.73
RACGAP1-223	ENST00000551260	RGS17	Q9UGC6	210 aa	Predicted RBP	10.5	□□□□□ -0.73
RACGAP1-223	ENST00000551260	ALK	Q9UM73	1620 aa		10.5	□□□□□ -0.73
RACGAP1-223	ENST00000551260	SCAPER	Q9BY12	1400 aa		10.49	□□□□□ -0.73
RACGAP1-223	ENST00000551260	ZNF142	P52746	1687 aa	Predicted RBP	10.48	□□□□□ -0.73
RACGAP1-223	ENST00000551260	TRAPPC8	Q9Y2L5	1435 aa		10.48	□□□□□ -0.73
RACGAP1-223	ENST00000551260	NUP153	P49790	1475 aa	Known RBP	10.48	□□□□□ -0.73
RACGAP1-223	ENST00000551260	DIP2C	Q9Y2E4	1556 aa		10.48	□□□□□ -0.73
RACGAP1-223	ENST00000551260	ABCA6	Q8N139	1617 aa		10.47	□□□□□ -0.73
RACGAP1-223	ENST00000551260	MYO5C	Q9NQX4	1742 aa		10.47	□□□□□ -0.73
RACGAP1-223	ENST00000551260	MYO3A	Q8NEV4	1616 aa		10.47	□□□□□ -0.73
RACGAP1-223	ENST00000551260	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.46	□□□□□ -0.73
RACGAP1-223	ENST00000551260	POLR1A	O95602	1720 aa	Predicted RBP	10.46	□□□□□ -0.74
RACGAP1-223	ENST00000551260	SAMD9	Q5K651	1589 aa		10.45	□□□□□ -0.74
RACGAP1-223	ENST00000551260	PROM2	Q8N271	834 aa		10.45	□□□□□ -0.74
RACGAP1-223	ENST00000551260	MROH2A	A6NES4	1674 aa		10.44	□□□□□ -0.74
RACGAP1-223	ENST00000551260	FKBP8	Q14318	412 aa		10.44	□□□□□ -0.74
RACGAP1-223	ENST00000551260	TOM1	O60784	492 aa		10.43	□□□□□ -0.74
RACGAP1-223	ENST00000551260	CLTC	Q00610	1675 aa	Known RBP	10.42	□□□□□ -0.74
RACGAP1-223	ENST00000551260	CLEC11A	Q9Y240	323 aa		10.42	□□□□□ -0.74
RACGAP1-223	ENST00000551260	KDM5C	P41229	1560 aa		10.42	□□□□□ -0.74
RACGAP1-223	ENST00000551260	RERE	Q9P2R6	1566 aa		10.42	□□□□□ -0.74
RACGAP1-223	ENST00000551260	TCOF1	Q13428	1488 aa	Known RBP	10.42	□□□□□ -0.74
RACGAP1-223	ENST00000551260	STRCP1	A6NGW2	1772 aa		10.42	□□□□□ -0.74
RACGAP1-223	ENST00000551260	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.41	□□□□□ -0.74
RACGAP1-223	ENST00000551260	POTEA	Q6S8J7	498 aa		10.41	□□□□□ -0.74
RACGAP1-223	ENST00000551260	PLEKHD1	A6NEE1	506 aa		10.4	□□□□□ -0.74
RACGAP1-223	ENST00000551260	PLA2R1	Q13018	1463 aa		10.4	□□□□□ -0.74

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