RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 ABCC5O15440 1437 aa21.11■□□□□ 0.97
SCN8A-207ENST00000551216 CFDP1Q9UEE9 299 aaPredicted RBP21.11■□□□□ 0.97
SCN8A-207ENST00000551216 ADGBQ8N7X0 1667 aa21.08■□□□□ 0.97
SCN8A-207ENST00000551216 CROCC2H7BZ55 1655 aa21.08■□□□□ 0.96
SCN8A-207ENST00000551216 ADGRL2O95490 1459 aa21.07■□□□□ 0.96
SCN8A-207ENST00000551216 DIEXFQ68CQ4 756 aaKnown RBP21.06■□□□□ 0.96
SCN8A-207ENST00000551216 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
SCN8A-207ENST00000551216 SHANK2Q9UPX8 1470 aa21.05■□□□□ 0.96
SCN8A-207ENST00000551216 PREX2Q70Z35 1606 aa21.02■□□□□ 0.96
SCN8A-207ENST00000551216 ARHGEF5Q12774 1597 aa21.01■□□□□ 0.95
SCN8A-207ENST00000551216 KDM5BQ9UGL1 1544 aa21■□□□□ 0.95
SCN8A-207ENST00000551216 RRP7BPQ9NSQ0 103 aa21■□□□□ 0.95
SCN8A-207ENST00000551216 ZNF644Q9H582 1327 aaPredicted RBP21■□□□□ 0.95
SCN8A-207ENST00000551216 RSPH4AQ5TD94 716 aa20.99■□□□□ 0.95
SCN8A-207ENST00000551216 CHIC2Q9UKJ5 165 aa20.99■□□□□ 0.95
SCN8A-207ENST00000551216 NCOA1Q15788 1441 aa20.98■□□□□ 0.95
SCN8A-207ENST00000551216 ANKRD30AQ9BXX3 1397 aa20.96■□□□□ 0.95
SCN8A-207ENST00000551216 CDC42BPBQ9Y5S2 1711 aa20.96■□□□□ 0.95
SCN8A-207ENST00000551216 ZCCHC11Q5TAX3 1644 aaKnown RBP20.96■□□□□ 0.95
SCN8A-207ENST00000551216 KDM6BO15054 1643 aa20.94■□□□□ 0.94
SCN8A-207ENST00000551216 MYO5CQ9NQX4 1742 aa20.93■□□□□ 0.94
SCN8A-207ENST00000551216 PLEKHH2Q8IVE3 1493 aa20.92■□□□□ 0.94
SCN8A-207ENST00000551216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.92■□□□□ 0.94
SCN8A-207ENST00000551216 SIN3AQ96ST3 1273 aa20.9■□□□□ 0.94
SCN8A-207ENST00000551216 MBD5Q9P267 1494 aa20.9■□□□□ 0.94
SCN8A-207ENST00000551216 TTC37Q6PGP7 1564 aa20.89■□□□□ 0.93
SCN8A-207ENST00000551216 SAMD9LQ8IVG5 1584 aa20.89■□□□□ 0.93
SCN8A-207ENST00000551216 ZNF777Q9ULD5 760 aaPredicted RBP20.89■□□□□ 0.93
SCN8A-207ENST00000551216 C9orf84Q5VXU9 1444 aa20.89■□□□□ 0.93
SCN8A-207ENST00000551216 KIAA1107Q9UPP5 1409 aa20.89■□□□□ 0.93
SCN8A-207ENST00000551216 TONSLQ96HA7 1378 aa20.88■□□□□ 0.93
SCN8A-207ENST00000551216 MPHOSPH9Q99550 1183 aa20.88■□□□□ 0.93
SCN8A-207ENST00000551216 DENND4BO75064 1496 aaPredicted RBP20.88■□□□□ 0.93
SCN8A-207ENST00000551216 CCDC141Q6ZP82 1450 aa20.88■□□□□ 0.93
SCN8A-207ENST00000551216 ARAP3Q8WWN8 1544 aa20.87■□□□□ 0.93
SCN8A-207ENST00000551216 PPP1R15AO75807 674 aaPredicted RBP20.87■□□□□ 0.93
SCN8A-207ENST00000551216 TSPY4P0CV99 314 aa20.87■□□□□ 0.93
SCN8A-207ENST00000551216 TSPY10P0CW01 314 aa20.87■□□□□ 0.93
SCN8A-207ENST00000551216 TRIM52Q96A61 297 aa20.87■□□□□ 0.93
SCN8A-207ENST00000551216 MAST1Q9Y2H9 1570 aa20.87■□□□□ 0.93
SCN8A-207ENST00000551216 NEUROD1Q13562 356 aa20.86■□□□□ 0.93
SCN8A-207ENST00000551216 OSCARQ8IYS5 282 aa20.86■□□□□ 0.93
SCN8A-207ENST00000551216 ARHGAP5Q13017 1502 aa20.84■□□□□ 0.93
SCN8A-207ENST00000551216 ANKRD50Q9ULJ7 1429 aa20.84■□□□□ 0.93
SCN8A-207ENST00000551216 PLCH2O75038 1416 aa20.83■□□□□ 0.92
SCN8A-207ENST00000551216 KDM5DQ9BY66 1539 aa20.8■□□□□ 0.92
SCN8A-207ENST00000551216 ANKRD30BQ9BXX2 1392 aa20.79■□□□□ 0.92
SCN8A-207ENST00000551216 PZPP20742 1482 aa20.77■□□□□ 0.92
SCN8A-207ENST00000551216 WDR7Q9Y4E6 1490 aa20.77■□□□□ 0.92
SCN8A-207ENST00000551216 PLXNC1O60486 1568 aa20.77■□□□□ 0.92
SCN8A-207ENST00000551216 SYCP2Q9BX26 1530 aa20.76■□□□□ 0.91
SCN8A-207ENST00000551216 RPRD2Q5VT52 1461 aaKnown RBP20.76■□□□□ 0.91
SCN8A-207ENST00000551216 KIF15Q9NS87 1388 aa20.75■□□□□ 0.91
SCN8A-207ENST00000551216 HNRNPMP52272 730 aaKnown RBP eCLIP20.75■□□□□ 0.91
SCN8A-207ENST00000551216 EFCAB2Q5VUJ9 269 aa20.75■□□□□ 0.91
SCN8A-207ENST00000551216 SLC4A1APQ9BWU0 796 aaKnown RBP20.75■□□□□ 0.91
SCN8A-207ENST00000551216 ABCA9Q8IUA7 1624 aa20.72■□□□□ 0.91
SCN8A-207ENST00000551216 ABCC1P33527 1531 aa20.72■□□□□ 0.91
SCN8A-207ENST00000551216 KCNH8Q96L42 1107 aa20.69■□□□□ 0.9
SCN8A-207ENST00000551216 DUOX2Q9NRD8 1548 aa20.66■□□□□ 0.9
SCN8A-207ENST00000551216 UNC13BO14795 1591 aa20.66■□□□□ 0.9
SCN8A-207ENST00000551216 RTEL1-TNFRSF6BF6WH68 1400 aa20.65■□□□□ 0.9
SCN8A-207ENST00000551216 NUP155O75694 1391 aa20.64■□□□□ 0.89
SCN8A-207ENST00000551216 ARHGEF12Q9NZN5 1544 aa20.64■□□□□ 0.89
SCN8A-207ENST00000551216 ASXL2Q76L83 1435 aa20.63■□□□□ 0.89
SCN8A-207ENST00000551216 ERBINQ96RT1 1412 aa20.63■□□□□ 0.89
SCN8A-207ENST00000551216 TEX14Q8IWB6 1497 aa20.63■□□□□ 0.89
SCN8A-207ENST00000551216 NPM1P06748 294 aaKnown RBP eCLIP20.6■□□□□ 0.89
SCN8A-207ENST00000551216 MIER1Q8N108 512 aa20.6■□□□□ 0.89
SCN8A-207ENST00000551216 PKD2Q13563 968 aa20.59■□□□□ 0.89
SCN8A-207ENST00000551216 FAM135AQ9P2D6 1515 aa20.59■□□□□ 0.89
SCN8A-207ENST00000551216 MAGI2Q86UL8 1455 aa20.58■□□□□ 0.89
SCN8A-207ENST00000551216 L3MBTL2Q969R5 705 aa20.58■□□□□ 0.89
SCN8A-207ENST00000551216 FANCAO15360 1455 aa20.58■□□□□ 0.88
SCN8A-207ENST00000551216 IQGAP3Q86VI3 1631 aa20.57■□□□□ 0.88
SCN8A-207ENST00000551216 FOXD1Q16676 465 aa20.56■□□□□ 0.88
SCN8A-207ENST00000551216 CFAP74Q9C0B2 1584 aa20.56■□□□□ 0.88
SCN8A-207ENST00000551216 CENPBP07199 599 aaPredicted RBP20.54■□□□□ 0.88
SCN8A-207ENST00000551216 TRAPPC8Q9Y2L5 1435 aa20.54■□□□□ 0.88
SCN8A-207ENST00000551216 ZFYVE16Q7Z3T8 1539 aa20.53■□□□□ 0.88
SCN8A-207ENST00000551216 INO80Q9ULG1 1556 aaPredicted RBP20.52■□□□□ 0.87
SCN8A-207ENST00000551216 SPAG9O60271 1321 aaKnown RBP20.51■□□□□ 0.87
SCN8A-207ENST00000551216 ATP10AO60312 1499 aa20.49■□□□□ 0.87
SCN8A-207ENST00000551216 ADGRL1O94910 1474 aa20.49■□□□□ 0.87
SCN8A-207ENST00000551216 ATP7AQ04656 1500 aa20.47■□□□□ 0.87
SCN8A-207ENST00000551216 UHRF1BP1Q6BDS2 1440 aa20.47■□□□□ 0.87
SCN8A-207ENST00000551216 EIF4G2P78344 907 aaKnown RBP eCLIP20.47■□□□□ 0.87
SCN8A-207ENST00000551216 EIF2AK4Q9P2K8 1649 aaKnown RBP20.46■□□□□ 0.87
SCN8A-207ENST00000551216 DEPDC5O75140 1603 aa20.46■□□□□ 0.87
SCN8A-207ENST00000551216 SCAPERQ9BY12 1400 aa20.44■□□□□ 0.86
SCN8A-207ENST00000551216 ZNF518AQ6AHZ1 1483 aa20.44■□□□□ 0.86
SCN8A-207ENST00000551216 CD109Q6YHK3 1445 aa20.41■□□□□ 0.86
SCN8A-207ENST00000551216 AFAP1Q8N556 730 aa20.41■□□□□ 0.86
SCN8A-207ENST00000551216 NEO1Q92859 1461 aa20.4■□□□□ 0.86
SCN8A-207ENST00000551216 CCDC144AA2RUR9 1427 aa20.4■□□□□ 0.86
SCN8A-207ENST00000551216 POLR1AO95602 1720 aaPredicted RBP20.4■□□□□ 0.86
SCN8A-207ENST00000551216 SPATA31E1Q6ZUB1 1445 aa20.39■□□□□ 0.85
SCN8A-207ENST00000551216 HSPA5P11021 654 aaKnown RBP20.38■□□□□ 0.85
SCN8A-207ENST00000551216 DDX10Q13206 875 aaKnown RBP20.38■□□□□ 0.85
SCN8A-207ENST00000551216 NBPF8Q3BBV2 869 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms