RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 PLCB2Q00722 1185 aa20.25■□□□□ 0.83
RBFOX1-212ENST00000550418 GZF1Q9H116 711 aaPredicted RBP20.24■□□□□ 0.83
RBFOX1-212ENST00000550418 TPRNQ4KMQ1 711 aa20.23■□□□□ 0.83
RBFOX1-212ENST00000550418 RSPH6AQ9H0K4 717 aa20.22■□□□□ 0.83
RBFOX1-212ENST00000550418 SENP3Q9H4L4 574 aaPredicted RBP20.22■□□□□ 0.83
RBFOX1-212ENST00000550418 GOLGA6L3A6NEY3 463 aa20.2■□□□□ 0.82
RBFOX1-212ENST00000550418 DHX57Q6P158 1386 aaKnown RBP20.2■□□□□ 0.82
RBFOX1-212ENST00000550418 GSE1Q14687 1217 aa20.18■□□□□ 0.82
RBFOX1-212ENST00000550418 CHMP4BQ9H444 224 aaKnown RBP20.18■□□□□ 0.82
RBFOX1-212ENST00000550418 CHAF1AQ13111 956 aaPredicted RBP20.17■□□□□ 0.82
RBFOX1-212ENST00000550418 GBP4Q96PP9 640 aa20.17■□□□□ 0.82
RBFOX1-212ENST00000550418 FHOD3Q2V2M9 1422 aa20.16■□□□□ 0.82
RBFOX1-212ENST00000550418 ZRSR1Q15695 479 aaKnown RBP20.16■□□□□ 0.82
RBFOX1-212ENST00000550418 MAPK8IP3Q9UPT6 1336 aa20.15■□□□□ 0.82
RBFOX1-212ENST00000550418 TMF1P82094 1093 aa20.14■□□□□ 0.82
RBFOX1-212ENST00000550418 FANCD2Q9BXW9 1451 aa20.14■□□□□ 0.81
RBFOX1-212ENST00000550418 PDE4AP27815 886 aa20.14■□□□□ 0.81
RBFOX1-212ENST00000550418 HSP90AA2PQ14568 343 aaPredicted RBP20.14■□□□□ 0.81
RBFOX1-212ENST00000550418 DCAF11Q8TEB1 546 aa20.14■□□□□ 0.81
RBFOX1-212ENST00000550418 RALBP1Q15311 655 aa20.13■□□□□ 0.81
RBFOX1-212ENST00000550418 KTN1Q86UP2 1357 aaKnown RBP20.13■□□□□ 0.81
RBFOX1-212ENST00000550418 PTMSP20962 102 aa20.12■□□□□ 0.81
RBFOX1-212ENST00000550418 FOXD1Q16676 465 aa20.1■□□□□ 0.81
RBFOX1-212ENST00000550418 PDE3BQ13370 1112 aa20.09■□□□□ 0.81
RBFOX1-212ENST00000550418 ARHGAP35Q9NRY4 1499 aa20.08■□□□□ 0.81
RBFOX1-212ENST00000550418 NCAPD3P42695 1498 aa20.07■□□□□ 0.8
RBFOX1-212ENST00000550418 VSIG10Q8N0Z9 540 aa20.07■□□□□ 0.8
RBFOX1-212ENST00000550418 ZBED9Q6R2W3 1325 aa20.06■□□□□ 0.8
RBFOX1-212ENST00000550418 ARID3AQ99856 593 aa20.05■□□□□ 0.8
RBFOX1-212ENST00000550418 IGF1RP08069 1367 aa20.05■□□□□ 0.8
RBFOX1-212ENST00000550418 C14orf37Q86TY3 774 aa20.05■□□□□ 0.8
RBFOX1-212ENST00000550418 RWDD1Q9H446 243 aaPredicted RBP20.04■□□□□ 0.8
RBFOX1-212ENST00000550418 SLC4A3P48751 1232 aa20.03■□□□□ 0.8
RBFOX1-212ENST00000550418 RAD54L2Q9Y4B4 1467 aa20.03■□□□□ 0.8
RBFOX1-212ENST00000550418 KIAA2012Q0VF49 1180 aa20.03■□□□□ 0.8
RBFOX1-212ENST00000550418 MPHOSPH9Q99550 1183 aa20.03■□□□□ 0.8
RBFOX1-212ENST00000550418 FMN1Q68DA7 1419 aa20.02■□□□□ 0.8
RBFOX1-212ENST00000550418 PRKRIP1Q9H875 184 aaPredicted RBP20.02■□□□□ 0.8
RBFOX1-212ENST00000550418 L3MBTL2Q969R5 705 aa20.02■□□□□ 0.79
RBFOX1-212ENST00000550418 FGD5Q6ZNL6 1462 aa20.01■□□□□ 0.79
RBFOX1-212ENST00000550418 GOLGA6L6A8MZA4 724 aa20.01■□□□□ 0.79
RBFOX1-212ENST00000550418 NRDCO43847 1150 aa20.01■□□□□ 0.79
RBFOX1-212ENST00000550418 CFAP44Q96MT7 982 aa20.01■□□□□ 0.79
RBFOX1-212ENST00000550418 U2SURPO15042 1029 aaKnown RBP20■□□□□ 0.79
RBFOX1-212ENST00000550418 NLRP13Q86W25 1043 aa20■□□□□ 0.79
RBFOX1-212ENST00000550418 FAM161AQ3B820 660 aa19.99■□□□□ 0.79
RBFOX1-212ENST00000550418 PMFBP1Q8TBY8 1022 aa19.98■□□□□ 0.79
RBFOX1-212ENST00000550418 EXOC6Q8TAG9 804 aa19.98■□□□□ 0.79
RBFOX1-212ENST00000550418 GOLGA6L4A6NEF3 574 aa19.97■□□□□ 0.79
RBFOX1-212ENST00000550418 MFAP1P55081 439 aaKnown RBP19.97■□□□□ 0.79
RBFOX1-212ENST00000550418 PKD2Q13563 968 aa19.97■□□□□ 0.79
RBFOX1-212ENST00000550418 GOLGA2Q08379 1002 aa19.96■□□□□ 0.79
RBFOX1-212ENST00000550418 ZBTB7CA1YPR0 619 aa19.96■□□□□ 0.79
RBFOX1-212ENST00000550418 AMER1Q5JTC6 1135 aaPredicted RBP19.96■□□□□ 0.79
RBFOX1-212ENST00000550418 RRP1P56182 461 aaKnown RBP19.95■□□□□ 0.78
RBFOX1-212ENST00000550418 CENPQQ7L2Z9 268 aaPredicted RBP19.95■□□□□ 0.78
RBFOX1-212ENST00000550418 MCCP23508 829 aa19.93■□□□□ 0.78
RBFOX1-212ENST00000550418 SYNJ1O43426 1573 aa19.93■□□□□ 0.78
RBFOX1-212ENST00000550418 CALD1Q05682 793 aaKnown RBP19.92■□□□□ 0.78
RBFOX1-212ENST00000550418 DRC7Q8IY82 874 aa19.92■□□□□ 0.78
RBFOX1-212ENST00000550418 JPH4Q96JJ6 628 aa19.92■□□□□ 0.78
RBFOX1-212ENST00000550418 IPO8O15397 1037 aaKnown RBP19.92■□□□□ 0.78
RBFOX1-212ENST00000550418 MORC1Q86VD1 984 aa19.91■□□□□ 0.78
RBFOX1-212ENST00000550418 OSCARQ8IYS5 282 aa19.91■□□□□ 0.78
RBFOX1-212ENST00000550418 ROCK2O75116 1388 aaKnown RBP19.91■□□□□ 0.78
RBFOX1-212ENST00000550418 DDX11L8A8MPP1 907 aa19.9■□□□□ 0.78
RBFOX1-212ENST00000550418 MLECQ14165 292 aa19.9■□□□□ 0.78
RBFOX1-212ENST00000550418 ANO8Q9HCE9 1232 aaPredicted RBP19.89■□□□□ 0.78
RBFOX1-212ENST00000550418 SYAP1Q96A49 352 aaPredicted RBP19.89■□□□□ 0.77
RBFOX1-212ENST00000550418 CARMIL2Q6F5E8 1435 aa19.89■□□□□ 0.77
RBFOX1-212ENST00000550418 NESP48681 1621 aa19.88■□□□□ 0.77
RBFOX1-212ENST00000550418 KCNJ4P48050 445 aa19.88■□□□□ 0.77
RBFOX1-212ENST00000550418 CYB5RLQ6IPT4 315 aa19.87■□□□□ 0.77
RBFOX1-212ENST00000550418 PLIN1O60240 522 aa19.87■□□□□ 0.77
RBFOX1-212ENST00000550418 ITPRIPQ8IWB1 547 aa19.87■□□□□ 0.77
RBFOX1-212ENST00000550418 MYBBP1AQ9BQG0 1328 aaKnown RBP19.86■□□□□ 0.77
RBFOX1-212ENST00000550418 BICRAQ9NZM4 1560 aa19.86■□□□□ 0.77
RBFOX1-212ENST00000550418 FGD1P98174 961 aa19.85■□□□□ 0.77
RBFOX1-212ENST00000550418 CFTRP13569 1480 aa19.85■□□□□ 0.77
RBFOX1-212ENST00000550418 NFKBIBQ15653 356 aa19.84■□□□□ 0.77
RBFOX1-212ENST00000550418 CRBNQ96SW2 442 aa19.84■□□□□ 0.77
RBFOX1-212ENST00000550418 PHLDB1Q86UU1 1377 aa19.84■□□□□ 0.77
RBFOX1-212ENST00000550418 KIF15Q9NS87 1388 aa19.84■□□□□ 0.77
RBFOX1-212ENST00000550418 DNAJC5BQ9UF47 199 aa19.84■□□□□ 0.77
RBFOX1-212ENST00000550418 CENPJQ9HC77 1338 aaPredicted RBP19.83■□□□□ 0.77
RBFOX1-212ENST00000550418 CLUAP1Q96AJ1 413 aa19.83■□□□□ 0.76
RBFOX1-212ENST00000550418 GAPVD1Q14C86 1478 aa19.82■□□□□ 0.76
RBFOX1-212ENST00000550418 HNRNPMP52272 730 aaKnown RBP eCLIP19.82■□□□□ 0.76
RBFOX1-212ENST00000550418 IL27Q8NEV9 243 aa19.81■□□□□ 0.76
RBFOX1-212ENST00000550418 HAP1P54257 671 aaPredicted RBP19.8■□□□□ 0.76
RBFOX1-212ENST00000550418 OS9Q13438 667 aaPredicted RBP19.8■□□□□ 0.76
RBFOX1-212ENST00000550418 FOXD4L1Q9NU39 408 aa19.8■□□□□ 0.76
RBFOX1-212ENST00000550418 PLEKHG5O94827 1062 aa19.8■□□□□ 0.76
RBFOX1-212ENST00000550418 KIF21BO75037 1637 aa19.8■□□□□ 0.76
RBFOX1-212ENST00000550418 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.76
RBFOX1-212ENST00000550418 A0A0G2JS52 829 aa19.79■□□□□ 0.76
RBFOX1-212ENST00000550418 SKOR2Q2VWA4 1001 aaPredicted RBP19.79■□□□□ 0.76
RBFOX1-212ENST00000550418 APBB1O00213 710 aa19.78■□□□□ 0.76
RBFOX1-212ENST00000550418 U2AF1L5P0DN76 240 aaPredicted RBP19.78■□□□□ 0.76
RBFOX1-212ENST00000550418 U2AF1Q01081 240 aaKnown RBP eCLIP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms