RNA–Protein interactions for RNA: ENST00000550194.5

CNOT2-224, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-224ENST00000550194 C3P01024 1663 aa12.4□□□□□ -0.42
CNOT2-224ENST00000550194 ZFYVE16Q7Z3T8 1539 aa12.4□□□□□ -0.42
CNOT2-224ENST00000550194 NCKAP5LQ9HCH0 1330 aa12.39□□□□□ -0.43
CNOT2-224ENST00000550194 IQGAP2Q13576 1575 aa12.39□□□□□ -0.43
CNOT2-224ENST00000550194 ZMYM4Q5VZL5 1548 aa12.38□□□□□ -0.43
CNOT2-224ENST00000550194 EFCAB5A4FU69 1503 aa12.37□□□□□ -0.43
CNOT2-224ENST00000550194 FHOD3Q2V2M9 1422 aa12.36□□□□□ -0.43
CNOT2-224ENST00000550194 DENND4BO75064 1496 aaPredicted RBP12.34□□□□□ -0.43
CNOT2-224ENST00000550194 PTPRKQ15262 1439 aa12.33□□□□□ -0.44
CNOT2-224ENST00000550194 CPS1P31327 1500 aa12.32□□□□□ -0.44
CNOT2-224ENST00000550194 SETBP1Q9Y6X0 1596 aa12.32□□□□□ -0.44
CNOT2-224ENST00000550194 TRAPPC8Q9Y2L5 1435 aa12.3□□□□□ -0.44
CNOT2-224ENST00000550194 ABCA8O94911 1581 aa12.29□□□□□ -0.44
CNOT2-224ENST00000550194 TCOF1Q13428 1488 aaKnown RBP12.28□□□□□ -0.44
CNOT2-224ENST00000550194 HECW1Q76N89 1606 aa12.28□□□□□ -0.44
CNOT2-224ENST00000550194 MAGI2Q86UL8 1455 aa12.27□□□□□ -0.44
CNOT2-224ENST00000550194 SUPT6HQ7KZ85 1726 aaKnown RBP12.27□□□□□ -0.45
CNOT2-224ENST00000550194 PPP6R1Q9UPN7 881 aa12.26□□□□□ -0.45
CNOT2-224ENST00000550194 PLA2R1Q13018 1463 aa12.26□□□□□ -0.45
CNOT2-224ENST00000550194 IGF1RP08069 1367 aa12.25□□□□□ -0.45
CNOT2-224ENST00000550194 SHANK2Q9UPX8 1470 aa12.25□□□□□ -0.45
CNOT2-224ENST00000550194 UGGT2Q9NYU1 1516 aa12.25□□□□□ -0.45
CNOT2-224ENST00000550194 PKD2Q13563 968 aa12.24□□□□□ -0.45
CNOT2-224ENST00000550194 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
CNOT2-224ENST00000550194 RAPGEF2Q9Y4G8 1499 aa12.23□□□□□ -0.45
CNOT2-224ENST00000550194 C9orf84Q5VXU9 1444 aa12.23□□□□□ -0.45
CNOT2-224ENST00000550194 TRIM52Q96A61 297 aa12.23□□□□□ -0.45
CNOT2-224ENST00000550194 CEP350Q5VT06 3117 aa12.23□□□□□ -0.45
CNOT2-224ENST00000550194 LRRC7Q96NW7 1537 aa12.22□□□□□ -0.45
CNOT2-224ENST00000550194 ATP10AO60312 1499 aa12.22□□□□□ -0.45
CNOT2-224ENST00000550194 ZNF142P52746 1687 aaPredicted RBP12.22□□□□□ -0.45
CNOT2-224ENST00000550194 RNF17Q9BXT8 1623 aaKnown RBP12.19□□□□□ -0.46
CNOT2-224ENST00000550194 EP400Q96L91 3159 aa12.19□□□□□ -0.46
CNOT2-224ENST00000550194 VWDEQ8N2E2 1590 aa12.18□□□□□ -0.46
CNOT2-224ENST00000550194 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
CNOT2-224ENST00000550194 CFAP74Q9C0B2 1584 aa12.17□□□□□ -0.46
CNOT2-224ENST00000550194 MYO3AQ8NEV4 1616 aa12.16□□□□□ -0.46
CNOT2-224ENST00000550194 ARID3CA6NKF2 412 aa12.16□□□□□ -0.46
CNOT2-224ENST00000550194 ATP10BO94823 1461 aa12.15□□□□□ -0.46
CNOT2-224ENST00000550194 POLR1AO95602 1720 aaPredicted RBP12.14□□□□□ -0.47
CNOT2-224ENST00000550194 NEURL4Q96JN8 1562 aa12.14□□□□□ -0.47
CNOT2-224ENST00000550194 STRCP1A6NGW2 1772 aa12.14□□□□□ -0.47
CNOT2-224ENST00000550194 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
CNOT2-224ENST00000550194 NPATQ14207 1427 aa12.13□□□□□ -0.47
CNOT2-224ENST00000550194 LRP5O75197 1615 aa12.13□□□□□ -0.47
CNOT2-224ENST00000550194 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
CNOT2-224ENST00000550194 CARMIL1Q5VZK9 1371 aa12.1□□□□□ -0.47
CNOT2-224ENST00000550194 CDK12Q9NYV4 1490 aaPredicted RBP12.09□□□□□ -0.47
CNOT2-224ENST00000550194 AGLP35573 1532 aa12.07□□□□□ -0.48
CNOT2-224ENST00000550194 MROH2AA6NES4 1674 aa12.07□□□□□ -0.48
CNOT2-224ENST00000550194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.06□□□□□ -0.48
CNOT2-224ENST00000550194 SYNMO15061 1565 aa12.05□□□□□ -0.48
CNOT2-224ENST00000550194 REREQ9P2R6 1566 aa12.05□□□□□ -0.48
CNOT2-224ENST00000550194 YY1P25490 414 aa12.04□□□□□ -0.48
CNOT2-224ENST00000550194 ESF1Q9H501 851 aaKnown RBP12.04□□□□□ -0.48
CNOT2-224ENST00000550194 DIP2CQ9Y2E4 1556 aa12.04□□□□□ -0.48
CNOT2-224ENST00000550194 XIRP1Q702N8 1843 aaKnown RBP12.04□□□□□ -0.48
CNOT2-224ENST00000550194 KIF27Q86VH2 1401 aa12.03□□□□□ -0.48
CNOT2-224ENST00000550194 SCAPERQ9BY12 1400 aa12.03□□□□□ -0.48
CNOT2-224ENST00000550194 CNTLNQ9NXG0 1405 aa12.03□□□□□ -0.48
CNOT2-224ENST00000550194 RXRBP28702 533 aa12.03□□□□□ -0.48
CNOT2-224ENST00000550194 ZNF772Q68DY9 489 aaPredicted RBP12.03□□□□□ -0.48
CNOT2-224ENST00000550194 LRP6O75581 1613 aa12.03□□□□□ -0.48
CNOT2-224ENST00000550194 FAM135BQ49AJ0 1406 aa12.03□□□□□ -0.48
CNOT2-224ENST00000550194 DNMT1P26358 1616 aaKnown RBP12.02□□□□□ -0.49
CNOT2-224ENST00000550194 FOXD1Q16676 465 aa12.02□□□□□ -0.49
CNOT2-224ENST00000550194 SENP3-EIF4A1A0A087X0R7 540 aa12.01□□□□□ -0.49
CNOT2-224ENST00000550194 RGS12O14924 1447 aa12.01□□□□□ -0.49
CNOT2-224ENST00000550194 ROBO1Q9Y6N7 1651 aa12□□□□□ -0.49
CNOT2-224ENST00000550194 CDK13Q14004 1512 aaKnown RBP11.99□□□□□ -0.49
CNOT2-224ENST00000550194 ABCA6Q8N139 1617 aa11.99□□□□□ -0.49
CNOT2-224ENST00000550194 ZMYM3Q14202 1370 aa11.98□□□□□ -0.49
CNOT2-224ENST00000550194 A2ML1A8K2U0 1454 aa11.95□□□□□ -0.5
CNOT2-224ENST00000550194 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
CNOT2-224ENST00000550194 KDM5CP41229 1560 aa11.95□□□□□ -0.5
CNOT2-224ENST00000550194 PHLPP1O60346 1717 aa11.94□□□□□ -0.5
CNOT2-224ENST00000550194 JCADQ9P266 1359 aa11.94□□□□□ -0.5
CNOT2-224ENST00000550194 NUTM2BA6NNL0 878 aaPredicted RBP11.93□□□□□ -0.5
CNOT2-224ENST00000550194 NUTM2EB1AL46 878 aaPredicted RBP11.93□□□□□ -0.5
CNOT2-224ENST00000550194 NUTM2DQ5VT03 806 aaPredicted RBP11.93□□□□□ -0.5
CNOT2-224ENST00000550194 NUTM2AQ8IVF1 878 aaPredicted RBP11.93□□□□□ -0.5
CNOT2-224ENST00000550194 CLTCQ00610 1675 aaKnown RBP11.93□□□□□ -0.5
CNOT2-224ENST00000550194 IQGAP1P46940 1657 aa11.92□□□□□ -0.5
CNOT2-224ENST00000550194 CTTNBP2Q8WZ74 1663 aa11.91□□□□□ -0.5
CNOT2-224ENST00000550194 MED14O60244 1454 aa11.91□□□□□ -0.5
CNOT2-224ENST00000550194 NHSL1Q5SYE7 1610 aa11.91□□□□□ -0.5
CNOT2-224ENST00000550194 NPHP4O75161 1426 aaPredicted RBP11.91□□□□□ -0.5
CNOT2-224ENST00000550194 ATAD2Q6PL18 1390 aa11.91□□□□□ -0.5
CNOT2-224ENST00000550194 SLC34A2O95436 690 aa11.9□□□□□ -0.5
CNOT2-224ENST00000550194 MEX3CQ5U5Q3 659 aaKnown RBP11.9□□□□□ -0.5
CNOT2-224ENST00000550194 DEPDC5O75140 1603 aa11.89□□□□□ -0.51
CNOT2-224ENST00000550194 ZNF518AQ6AHZ1 1483 aa11.89□□□□□ -0.51
CNOT2-224ENST00000550194 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.89□□□□□ -0.51
CNOT2-224ENST00000550194 UTRNP46939 3433 aa11.89□□□□□ -0.51
CNOT2-224ENST00000550194 COL16A1Q07092 1604 aaPredicted RBP11.88□□□□□ -0.51
CNOT2-224ENST00000550194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.87□□□□□ -0.51
CNOT2-224ENST00000550194 HNRNPUL2Q1KMD3 747 aaKnown RBP11.87□□□□□ -0.51
CNOT2-224ENST00000550194 ITSN2Q9NZM3 1697 aa11.87□□□□□ -0.51
CNOT2-224ENST00000550194 PLCH2O75038 1416 aa11.86□□□□□ -0.51
CNOT2-224ENST00000550194 AFAP1Q8N556 730 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms