RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 CNGB1Q14028 1251 aaPredicted RBP15.1■□□□□ 0.01
SMARCC2-208ENST00000550150 ATP10BO94823 1461 aa15.1■□□□□ 0.01
SMARCC2-208ENST00000550150 ADCY10Q96PN6 1610 aa15.1■□□□□ 0.01
SMARCC2-208ENST00000550150 ERICH6Q7L0X2 663 aa15.09■□□□□ 0.01
SMARCC2-208ENST00000550150 FGD6Q6ZV73 1430 aa15.07■□□□□ 0
SMARCC2-208ENST00000550150 HNRNPUQ00839 825 aaKnown RBP eCLIP15.06■□□□□ 0
SMARCC2-208ENST00000550150 PTPRKQ15262 1439 aa15.06■□□□□ 0
SMARCC2-208ENST00000550150 PTPN23Q9H3S7 1636 aa15.06■□□□□ 0
SMARCC2-208ENST00000550150 MYOM3Q5VTT5 1437 aa15.04■□□□□ -0
SMARCC2-208ENST00000550150 UACAQ9BZF9 1416 aa15.03■□□□□ -0
SMARCC2-208ENST00000550150 SETD5Q9C0A6 1442 aa15.02■□□□□ -0
SMARCC2-208ENST00000550150 ZNF644Q9H582 1327 aaPredicted RBP15.01□□□□□ -0.01
SMARCC2-208ENST00000550150 ABCC2Q92887 1545 aa15.01□□□□□ -0.01
SMARCC2-208ENST00000550150 OSCARQ8IYS5 282 aa15□□□□□ -0.01
SMARCC2-208ENST00000550150 PPP1R15AO75807 674 aaPredicted RBP15□□□□□ -0.01
SMARCC2-208ENST00000550150 TROQ12816 1431 aaPredicted RBP15□□□□□ -0.01
SMARCC2-208ENST00000550150 TONSLQ96HA7 1378 aa14.99□□□□□ -0.01
SMARCC2-208ENST00000550150 CROCC2H7BZ55 1655 aa14.99□□□□□ -0.01
SMARCC2-208ENST00000550150 ZCCHC11Q5TAX3 1644 aaKnown RBP14.98□□□□□ -0.01
SMARCC2-208ENST00000550150 AKNAQ7Z591 1439 aa14.98□□□□□ -0.01
SMARCC2-208ENST00000550150 CDC42BPAQ5VT25 1732 aa14.97□□□□□ -0.01
SMARCC2-208ENST00000550150 KDM5BQ9UGL1 1544 aa14.96□□□□□ -0.01
SMARCC2-208ENST00000550150 CDK11AQ9UQ88 783 aaPredicted RBP14.96□□□□□ -0.01
SMARCC2-208ENST00000550150 HFM1A2PYH4 1435 aa14.96□□□□□ -0.01
SMARCC2-208ENST00000550150 ABCC10Q5T3U5 1492 aa14.95□□□□□ -0.02
SMARCC2-208ENST00000550150 SENP3-EIF4A1A0A087X0R7 540 aa14.95□□□□□ -0.02
SMARCC2-208ENST00000550150 GPATCH8Q9UKJ3 1502 aaKnown RBP14.95□□□□□ -0.02
SMARCC2-208ENST00000550150 DNMT1P26358 1616 aaKnown RBP14.94□□□□□ -0.02
SMARCC2-208ENST00000550150 TTC37Q6PGP7 1564 aa14.94□□□□□ -0.02
SMARCC2-208ENST00000550150 DENND4BO75064 1496 aaPredicted RBP14.93□□□□□ -0.02
SMARCC2-208ENST00000550150 MSH5O43196 834 aa14.93□□□□□ -0.02
SMARCC2-208ENST00000550150 KDM6BO15054 1643 aa14.92□□□□□ -0.02
SMARCC2-208ENST00000550150 FAM9BQ8IZU0 186 aa14.92□□□□□ -0.02
SMARCC2-208ENST00000550150 MIA2Q96PC5 1412 aa14.91□□□□□ -0.02
SMARCC2-208ENST00000550150 ITSN2Q9NZM3 1697 aa14.91□□□□□ -0.02
SMARCC2-208ENST00000550150 CDC42BPBQ9Y5S2 1711 aa14.91□□□□□ -0.02
SMARCC2-208ENST00000550150 ADGBQ8N7X0 1667 aa14.9□□□□□ -0.02
SMARCC2-208ENST00000550150 CCER2I3L3R5 266 aa14.9□□□□□ -0.02
SMARCC2-208ENST00000550150 CHIC2Q9UKJ5 165 aa14.9□□□□□ -0.02
SMARCC2-208ENST00000550150 UHRF1BP1LA0JNW5 1464 aa14.9□□□□□ -0.02
SMARCC2-208ENST00000550150 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.89□□□□□ -0.036e-6■■□□□ 13.3
SMARCC2-208ENST00000550150 NAIPQ13075 1403 aa14.89□□□□□ -0.03
SMARCC2-208ENST00000550150 PLEKHD1A6NEE1 506 aa14.89□□□□□ -0.03
SMARCC2-208ENST00000550150 POLR3GLQ9BT43 218 aa14.89□□□□□ -0.03
SMARCC2-208ENST00000550150 CAMSAP2Q08AD1 1489 aa14.88□□□□□ -0.03
SMARCC2-208ENST00000550150 B4GALNT3Q6L9W6 998 aa14.86□□□□□ -0.03
SMARCC2-208ENST00000550150 ABCC5O15440 1437 aa14.85□□□□□ -0.03
SMARCC2-208ENST00000550150 RRP7BPQ9NSQ0 103 aa14.85□□□□□ -0.03
SMARCC2-208ENST00000550150 ZNF777Q9ULD5 760 aaPredicted RBP14.85□□□□□ -0.03
SMARCC2-208ENST00000550150 PREX2Q70Z35 1606 aa14.84□□□□□ -0.03
SMARCC2-208ENST00000550150 SAMD9LQ8IVG5 1584 aa14.83□□□□□ -0.03
SMARCC2-208ENST00000550150 DAPK1P53355 1430 aa14.83□□□□□ -0.04
SMARCC2-208ENST00000550150 RIMBP3CA6NJZ7 1639 aa14.83□□□□□ -0.04
SMARCC2-208ENST00000550150 RIMBP3BA6NNM3 1639 aa14.83□□□□□ -0.04
SMARCC2-208ENST00000550150 RIMBP3Q9UFD9 1639 aa14.83□□□□□ -0.04
SMARCC2-208ENST00000550150 CFDP1Q9UEE9 299 aaPredicted RBP14.83□□□□□ -0.04
SMARCC2-208ENST00000550150 NBR1Q14596 966 aa14.82□□□□□ -0.04
SMARCC2-208ENST00000550150 PHF23Q9BUL5 403 aaPredicted RBP14.81□□□□□ -0.04
SMARCC2-208ENST00000550150 CCDC184Q52MB2 194 aa14.81□□□□□ -0.04
SMARCC2-208ENST00000550150 FOXD1Q16676 465 aa14.8□□□□□ -0.04
SMARCC2-208ENST00000550150 HSPA5P11021 654 aaKnown RBP14.79□□□□□ -0.04
SMARCC2-208ENST00000550150 MYO5CQ9NQX4 1742 aa14.79□□□□□ -0.04
SMARCC2-208ENST00000550150 MRS2Q9HD23 443 aa14.78□□□□□ -0.04
SMARCC2-208ENST00000550150 TIMELESSQ9UNS1 1208 aa14.78□□□□□ -0.04
SMARCC2-208ENST00000550150 ADGRL2O95490 1459 aa14.78□□□□□ -0.04
SMARCC2-208ENST00000550150 ARHGEF12Q9NZN5 1544 aa14.78□□□□□ -0.04
SMARCC2-208ENST00000550150 ASXL2Q76L83 1435 aa14.77□□□□□ -0.04
SMARCC2-208ENST00000550150 ROCK1Q13464 1354 aa14.77□□□□□ -0.04
SMARCC2-208ENST00000550150 MBD5Q9P267 1494 aa14.77□□□□□ -0.05
SMARCC2-208ENST00000550150 WDR7Q9Y4E6 1490 aa14.77□□□□□ -0.05
SMARCC2-208ENST00000550150 HNRNPMP52272 730 aaKnown RBP eCLIP14.77□□□□□ -0.05
SMARCC2-208ENST00000550150 SYCP2Q9BX26 1530 aa14.76□□□□□ -0.05
SMARCC2-208ENST00000550150 CYB5RLQ6IPT4 315 aa14.75□□□□□ -0.05
SMARCC2-208ENST00000550150 ARHGAP5Q13017 1502 aa14.75□□□□□ -0.05
SMARCC2-208ENST00000550150 ZNF326Q5BKZ1 582 aaKnown RBP14.73□□□□□ -0.05
SMARCC2-208ENST00000550150 WASHC2AQ641Q2 1341 aa14.73□□□□□ -0.05
SMARCC2-208ENST00000550150 EIF4G2P78344 907 aaKnown RBP eCLIP14.72□□□□□ -0.05
SMARCC2-208ENST00000550150 POLR1AO95602 1720 aaPredicted RBP14.72□□□□□ -0.05
SMARCC2-208ENST00000550150 ARHGEF5Q12774 1597 aa14.72□□□□□ -0.05
SMARCC2-208ENST00000550150 PPP4R2Q9NY27 417 aa14.71□□□□□ -0.05
SMARCC2-208ENST00000550150 ABCA9Q8IUA7 1624 aa14.71□□□□□ -0.06
SMARCC2-208ENST00000550150 SHANK2Q9UPX8 1470 aa14.71□□□□□ -0.06
SMARCC2-208ENST00000550150 NCOA1Q15788 1441 aa14.7□□□□□ -0.06
SMARCC2-208ENST00000550150 KDM5DQ9BY66 1539 aa14.7□□□□□ -0.06
SMARCC2-208ENST00000550150 PLCH2O75038 1416 aa14.7□□□□□ -0.06
SMARCC2-208ENST00000550150 FANCIQ9NVI1 1328 aa14.68□□□□□ -0.06
SMARCC2-208ENST00000550150 C9orf84Q5VXU9 1444 aa14.67□□□□□ -0.06
SMARCC2-208ENST00000550150 DEKP35659 375 aaKnown RBP14.67□□□□□ -0.06
SMARCC2-208ENST00000550150 MAST1Q9Y2H9 1570 aa14.67□□□□□ -0.06
SMARCC2-208ENST00000550150 ABCC1P33527 1531 aa14.66□□□□□ -0.06
SMARCC2-208ENST00000550150 TRAPPC8Q9Y2L5 1435 aa14.66□□□□□ -0.06
SMARCC2-208ENST00000550150 C11orf95C9JLR9 678 aaPredicted RBP14.65□□□□□ -0.06
SMARCC2-208ENST00000550150 L3MBTL2Q969R5 705 aa14.64□□□□□ -0.07
SMARCC2-208ENST00000550150 PZPP20742 1482 aa14.64□□□□□ -0.07
SMARCC2-208ENST00000550150 CCDC141Q6ZP82 1450 aa14.64□□□□□ -0.07
SMARCC2-208ENST00000550150 NPM2Q86SE8 214 aaKnown RBP14.64□□□□□ -0.07
SMARCC2-208ENST00000550150 SALL2Q9Y467 1007 aaPredicted RBP14.64□□□□□ -0.07
SMARCC2-208ENST00000550150 PRKRIP1Q9H875 184 aaPredicted RBP14.62□□□□□ -0.07
SMARCC2-208ENST00000550150 CCDC136Q96JN2 1154 aa14.62□□□□□ -0.07
SMARCC2-208ENST00000550150 TEX14Q8IWB6 1497 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms