RNA–Protein interactions for RNA: ENST00000549913.6

RPH3A-217, Transcript of rabphilin 3A, humanhuman

TSL 1 (best)

Gene RPH3A, Length 5,188 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-217ENST00000549913 SMARCA4P51532 1647 aa14.51□□□□□ -0.09
RPH3A-217ENST00000549913 KTN1Q86UP2 1357 aaKnown RBP14.51□□□□□ -0.09
RPH3A-217ENST00000549913 PNNQ9H307 717 aaKnown RBP14.5□□□□□ -0.09
RPH3A-217ENST00000549913 CASC1Q6TDU7 716 aa14.5□□□□□ -0.09
RPH3A-217ENST00000549913 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
RPH3A-217ENST00000549913 RCAN3Q9UKA8 241 aa14.48□□□□□ -0.09
RPH3A-217ENST00000549913 L3MBTL2Q969R5 705 aa14.48□□□□□ -0.09
RPH3A-217ENST00000549913 MORC1Q86VD1 984 aa14.47□□□□□ -0.09
RPH3A-217ENST00000549913 TCERG1O14776 1098 aaKnown RBP14.47□□□□□ -0.09
RPH3A-217ENST00000549913 RALBP1Q15311 655 aa14.47□□□□□ -0.09
RPH3A-217ENST00000549913 ROCK2O75116 1388 aaKnown RBP14.46□□□□□ -0.09
RPH3A-217ENST00000549913 EFCAB2Q5VUJ9 269 aa14.46□□□□□ -0.09
RPH3A-217ENST00000549913 SRPK2P78362 688 aaKnown RBP14.45□□□□□ -0.1
RPH3A-217ENST00000549913 PTMAP06454 111 aaKnown RBP14.45□□□□□ -0.1
RPH3A-217ENST00000549913 NAP1L5Q96NT1 182 aaPredicted RBP14.45□□□□□ -0.1
RPH3A-217ENST00000549913 A0A0G2JS52 829 aa14.44□□□□□ -0.1
RPH3A-217ENST00000549913 CCDC18Q5T9S5 1454 aa14.44□□□□□ -0.1
RPH3A-217ENST00000549913 HSP90AB1P08238 724 aaKnown RBP14.43□□□□□ -0.1
RPH3A-217ENST00000549913 GGT6Q6P531 493 aa14.43□□□□□ -0.1
RPH3A-217ENST00000549913 IPO9Q96P70 1041 aaKnown RBP14.41□□□□□ -0.1
RPH3A-217ENST00000549913 L1TD1Q5T7N2 865 aaKnown RBP14.4□□□□□ -0.1
RPH3A-217ENST00000549913 RSPH4AQ5TD94 716 aa14.4□□□□□ -0.1
RPH3A-217ENST00000549913 HDGFP51858 240 aaKnown RBP14.4□□□□□ -0.1
RPH3A-217ENST00000549913 HSCBQ8IWL3 235 aa14.4□□□□□ -0.1
RPH3A-217ENST00000549913 SAFB2Q14151 953 aaKnown RBP eCLIP14.4□□□□□ -0.1
RPH3A-217ENST00000549913 DNTTIP2Q5QJE6 756 aaKnown RBP14.38□□□□□ -0.11
RPH3A-217ENST00000549913 HAP1P54257 671 aaPredicted RBP14.38□□□□□ -0.11
RPH3A-217ENST00000549913 HNRNPMP52272 730 aaKnown RBP eCLIP14.37□□□□□ -0.11
RPH3A-217ENST00000549913 LMOD2Q6P5Q4 547 aa14.37□□□□□ -0.11
RPH3A-217ENST00000549913 NLRP13Q86W25 1043 aa14.37□□□□□ -0.11
RPH3A-217ENST00000549913 PDE3BQ13370 1112 aa14.35□□□□□ -0.11
RPH3A-217ENST00000549913 MLECQ14165 292 aa14.35□□□□□ -0.11
RPH3A-217ENST00000549913 HDGFL2Q7Z4V5 671 aaPredicted RBP14.35□□□□□ -0.11
RPH3A-217ENST00000549913 STK26Q9P289 416 aa14.35□□□□□ -0.11
RPH3A-217ENST00000549913 JPH4Q96JJ6 628 aa14.34□□□□□ -0.11
RPH3A-217ENST00000549913 EIF3AQ14152 1382 aaKnown RBP14.34□□□□□ -0.11
RPH3A-217ENST00000549913 U2AF1L5P0DN76 240 aaPredicted RBP14.34□□□□□ -0.11
RPH3A-217ENST00000549913 U2AF1Q01081 240 aaKnown RBP eCLIP14.34□□□□□ -0.11
RPH3A-217ENST00000549913 FANCD2Q9BXW9 1451 aa14.34□□□□□ -0.11
RPH3A-217ENST00000549913 KIF3BO15066 747 aa14.33□□□□□ -0.11
RPH3A-217ENST00000549913 SPRYD3Q8NCJ5 442 aa14.33□□□□□ -0.12
RPH3A-217ENST00000549913 IPO8O15397 1037 aaKnown RBP14.33□□□□□ -0.12
RPH3A-217ENST00000549913 TPRNQ4KMQ1 711 aa14.33□□□□□ -0.12
RPH3A-217ENST00000549913 OS9Q13438 667 aaPredicted RBP14.32□□□□□ -0.12
RPH3A-217ENST00000549913 PRKRIP1Q9H875 184 aaPredicted RBP14.32□□□□□ -0.12
RPH3A-217ENST00000549913 ZRSR1Q15695 479 aaKnown RBP14.31□□□□□ -0.12
RPH3A-217ENST00000549913 RWDD1Q9H446 243 aaPredicted RBP14.31□□□□□ -0.12
RPH3A-217ENST00000549913 SPAG9O60271 1321 aaKnown RBP14.31□□□□□ -0.12
RPH3A-217ENST00000549913 SOX12O15370 315 aa14.3□□□□□ -0.12
RPH3A-217ENST00000549913 GOLGA2Q08379 1002 aa14.3□□□□□ -0.12
RPH3A-217ENST00000549913 ZBED9Q6R2W3 1325 aa14.29□□□□□ -0.12
RPH3A-217ENST00000549913 IGF1RP08069 1367 aa14.29□□□□□ -0.12
RPH3A-217ENST00000549913 CFAP44Q96MT7 982 aa14.29□□□□□ -0.12
RPH3A-217ENST00000549913 PHLDB1Q86UU1 1377 aa14.29□□□□□ -0.12
RPH3A-217ENST00000549913 CALD1Q05682 793 aaKnown RBP14.28□□□□□ -0.12
RPH3A-217ENST00000549913 KIF15Q9NS87 1388 aa14.28□□□□□ -0.12
RPH3A-217ENST00000549913 ST20-MTHFSA0A0A6YYL1 179 aa14.28□□□□□ -0.12
RPH3A-217ENST00000549913 SLKQ9H2G2 1235 aaPredicted RBP14.28□□□□□ -0.12
RPH3A-217ENST00000549913 PLCB2Q00722 1185 aa14.28□□□□□ -0.12
RPH3A-217ENST00000549913 RTF1Q92541 710 aaKnown RBP14.27□□□□□ -0.13
RPH3A-217ENST00000549913 FANCIQ9NVI1 1328 aa14.27□□□□□ -0.13
RPH3A-217ENST00000549913 KCNJ4P48050 445 aa14.27□□□□□ -0.13
RPH3A-217ENST00000549913 MYBBP1AQ9BQG0 1328 aaKnown RBP14.27□□□□□ -0.13
RPH3A-217ENST00000549913 PMFBP1Q8TBY8 1022 aa14.26□□□□□ -0.13
RPH3A-217ENST00000549913 CCDC144AA2RUR9 1427 aa14.26□□□□□ -0.13
RPH3A-217ENST00000549913 MSNP26038 577 aaKnown RBP14.25□□□□□ -0.13
RPH3A-217ENST00000549913 FGD5Q6ZNL6 1462 aa14.25□□□□□ -0.13
RPH3A-217ENST00000549913 GBP4Q96PP9 640 aa14.24□□□□□ -0.13
RPH3A-217ENST00000549913 FGD1P98174 961 aa14.24□□□□□ -0.13
RPH3A-217ENST00000549913 TERF2IPQ9NYB0 399 aa14.24□□□□□ -0.13
RPH3A-217ENST00000549913 USP35Q9P2H5 1018 aa14.24□□□□□ -0.13
RPH3A-217ENST00000549913 MCCP23508 829 aa14.23□□□□□ -0.13
RPH3A-217ENST00000549913 ITPRIPQ8IWB1 547 aa14.23□□□□□ -0.13
RPH3A-217ENST00000549913 PTMSP20962 102 aa14.23□□□□□ -0.13
RPH3A-217ENST00000549913 PDE4AP27815 886 aa14.22□□□□□ -0.13
RPH3A-217ENST00000549913 GZF1Q9H116 711 aaPredicted RBP14.22□□□□□ -0.13
RPH3A-217ENST00000549913 USP47Q96K76 1375 aa14.21□□□□□ -0.13
RPH3A-217ENST00000549913 KIF21BO75037 1637 aa14.21□□□□□ -0.13
RPH3A-217ENST00000549913 CDK11BP21127 795 aaKnown RBP14.21□□□□□ -0.13
RPH3A-217ENST00000549913 CCDC146Q8IYE0 955 aa14.21□□□□□ -0.13
RPH3A-217ENST00000549913 WASHC2CQ9Y4E1 1318 aa14.21□□□□□ -0.13
RPH3A-217ENST00000549913 RRP1P56182 461 aaKnown RBP14.2□□□□□ -0.14
RPH3A-217ENST00000549913 FGD6Q6ZV73 1430 aa14.2□□□□□ -0.14
RPH3A-217ENST00000549913 PANK3Q9H999 370 aa14.2□□□□□ -0.14
RPH3A-217ENST00000549913 SMC4Q9NTJ3 1288 aa14.2□□□□□ -0.14
RPH3A-217ENST00000549913 CENPJQ9HC77 1338 aaPredicted RBP14.2□□□□□ -0.14
RPH3A-217ENST00000549913 GAPVD1Q14C86 1478 aa14.2□□□□□ -0.14
RPH3A-217ENST00000549913 EXOC6Q8TAG9 804 aa14.19□□□□□ -0.14
RPH3A-217ENST00000549913 PTPRGP23470 1445 aa14.19□□□□□ -0.14
RPH3A-217ENST00000549913 CENPQQ7L2Z9 268 aaPredicted RBP14.19□□□□□ -0.14
RPH3A-217ENST00000549913 GOLGA6L3A6NEY3 463 aa14.18□□□□□ -0.14
RPH3A-217ENST00000549913 APBB1O00213 710 aa14.18□□□□□ -0.14
RPH3A-217ENST00000549913 MFAP1P55081 439 aaKnown RBP14.18□□□□□ -0.14
RPH3A-217ENST00000549913 MYOM3Q5VTT5 1437 aa14.18□□□□□ -0.14
RPH3A-217ENST00000549913 GOLGA6L4A6NEF3 574 aa14.18□□□□□ -0.14
RPH3A-217ENST00000549913 CLUAP1Q96AJ1 413 aa14.17□□□□□ -0.14
RPH3A-217ENST00000549913 TRAK1Q9UPV9 953 aa14.17□□□□□ -0.14
RPH3A-217ENST00000549913 GOLGA6L6A8MZA4 724 aa14.16□□□□□ -0.14
RPH3A-217ENST00000549913 FAM161AQ3B820 660 aa14.16□□□□□ -0.14
RPH3A-217ENST00000549913 UACAQ9BZF9 1416 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms