RNA–Protein interactions for RNA: ENST00000549784.5

CALCOCO1-216, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 746 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-216ENST00000549784 ATP1B4Q9UN42 357 aaPredicted RBP16.05■□□□□ 0.16
CALCOCO1-216ENST00000549784 CFAP74Q9C0B2 1584 aa16.04■□□□□ 0.16
CALCOCO1-216ENST00000549784 POGZQ7Z3K3 1410 aa16.04■□□□□ 0.16
CALCOCO1-216ENST00000549784 MAGI2Q86UL8 1455 aa16.03■□□□□ 0.16
CALCOCO1-216ENST00000549784 UBTFP17480 764 aaKnown RBP16.03■□□□□ 0.16
CALCOCO1-216ENST00000549784 ARHGAP35Q9NRY4 1499 aa16.03■□□□□ 0.16
CALCOCO1-216ENST00000549784 CEBPAP49715 358 aaPredicted RBP16■□□□□ 0.15
CALCOCO1-216ENST00000549784 EFCAB2Q5VUJ9 269 aa15.99■□□□□ 0.15
CALCOCO1-216ENST00000549784 ATP10AO60312 1499 aa15.98■□□□□ 0.15
CALCOCO1-216ENST00000549784 KIF14Q15058 1648 aa15.98■□□□□ 0.15
CALCOCO1-216ENST00000549784 AFAP1Q8N556 730 aa15.98■□□□□ 0.15
CALCOCO1-216ENST00000549784 FMN1Q68DA7 1419 aa15.97■□□□□ 0.15
CALCOCO1-216ENST00000549784 ARHGEF12Q9NZN5 1544 aa15.97■□□□□ 0.15
CALCOCO1-216ENST00000549784 C9orf84Q5VXU9 1444 aa15.95■□□□□ 0.14
CALCOCO1-216ENST00000549784 TROQ12816 1431 aaPredicted RBP15.94■□□□□ 0.14
CALCOCO1-216ENST00000549784 FER1L4A9Z1Z3 1794 aa15.94■□□□□ 0.14
CALCOCO1-216ENST00000549784 CERKQ8TCT0 537 aa15.93■□□□□ 0.14
CALCOCO1-216ENST00000549784 CDK11AQ9UQ88 783 aaPredicted RBP15.93■□□□□ 0.14
CALCOCO1-216ENST00000549784 MYO5CQ9NQX4 1742 aa15.91■□□□□ 0.14
CALCOCO1-216ENST00000549784 ARHGAP5Q13017 1502 aa15.91■□□□□ 0.14
CALCOCO1-216ENST00000549784 LRRIQ1Q96JM4 1722 aa15.91■□□□□ 0.14
CALCOCO1-216ENST00000549784 KDM5CP41229 1560 aa15.9■□□□□ 0.14
CALCOCO1-216ENST00000549784 ZNF518AQ6AHZ1 1483 aa15.9■□□□□ 0.14
CALCOCO1-216ENST00000549784 TRAPPC8Q9Y2L5 1435 aa15.88■□□□□ 0.13
CALCOCO1-216ENST00000549784 DIP2CQ9Y2E4 1556 aa15.87■□□□□ 0.13
CALCOCO1-216ENST00000549784 MYT1LQ9UL68 1186 aa15.87■□□□□ 0.13
CALCOCO1-216ENST00000549784 CLIP1P30622 1438 aa15.86■□□□□ 0.13
CALCOCO1-216ENST00000549784 CDC42BPBQ9Y5S2 1711 aa15.85■□□□□ 0.13
CALCOCO1-216ENST00000549784 MLH3Q9UHC1 1453 aa15.84■□□□□ 0.13
CALCOCO1-216ENST00000549784 ABCA6Q8N139 1617 aa15.84■□□□□ 0.13
CALCOCO1-216ENST00000549784 PREX1Q8TCU6 1659 aa15.83■□□□□ 0.13
CALCOCO1-216ENST00000549784 STRCQ7RTU9 1775 aa15.82■□□□□ 0.12
CALCOCO1-216ENST00000549784 CASKIN1Q8WXD9 1431 aa15.82■□□□□ 0.12
CALCOCO1-216ENST00000549784 REREQ9P2R6 1566 aa15.82■□□□□ 0.12
CALCOCO1-216ENST00000549784 ABCC1P33527 1531 aa15.81■□□□□ 0.12
CALCOCO1-216ENST00000549784 UHRF1BP1Q6BDS2 1440 aa15.81■□□□□ 0.12
CALCOCO1-216ENST00000549784 PREX2Q70Z35 1606 aa15.79■□□□□ 0.12
CALCOCO1-216ENST00000549784 AGLP35573 1532 aa15.78■□□□□ 0.12
CALCOCO1-216ENST00000549784 C3P01024 1663 aa15.77■□□□□ 0.12
CALCOCO1-216ENST00000549784 ZNF777Q9ULD5 760 aaPredicted RBP15.77■□□□□ 0.12
CALCOCO1-216ENST00000549784 DMRT2Q9Y5R5 561 aa15.77■□□□□ 0.12
CALCOCO1-216ENST00000549784 KIDINS220Q9ULH0 1771 aa15.77■□□□□ 0.11
CALCOCO1-216ENST00000549784 CCDC18Q5T9S5 1454 aa15.77■□□□□ 0.11
CALCOCO1-216ENST00000549784 ITSN2Q9NZM3 1697 aa15.76■□□□□ 0.11
CALCOCO1-216ENST00000549784 HNRNPMP52272 730 aaKnown RBP eCLIP15.75■□□□□ 0.11
CALCOCO1-216ENST00000549784 GPATCH8Q9UKJ3 1502 aaKnown RBP15.74■□□□□ 0.11
CALCOCO1-216ENST00000549784 ESF1Q9H501 851 aaKnown RBP15.74■□□□□ 0.11
CALCOCO1-216ENST00000549784 SAMD9LQ8IVG5 1584 aa15.74■□□□□ 0.11
CALCOCO1-216ENST00000549784 CDC42BPAQ5VT25 1732 aa15.74■□□□□ 0.11
CALCOCO1-216ENST00000549784 PTPRTO14522 1441 aa15.73■□□□□ 0.11
CALCOCO1-216ENST00000549784 ILDR2Q71H61 639 aa15.72■□□□□ 0.11
CALCOCO1-216ENST00000549784 SYCP2Q9BX26 1530 aa15.71■□□□□ 0.11
CALCOCO1-216ENST00000549784 FYCO1Q9BQS8 1478 aa15.71■□□□□ 0.1
CALCOCO1-216ENST00000549784 SPAG9O60271 1321 aaKnown RBP15.7■□□□□ 0.1
CALCOCO1-216ENST00000549784 LTBP4Q8N2S1 1624 aa15.7■□□□□ 0.1
CALCOCO1-216ENST00000549784 ZMYM3Q14202 1370 aa15.7■□□□□ 0.1
CALCOCO1-216ENST00000549784 SETD1BQ9UPS6 1966 aaKnown RBP15.69■□□□□ 0.1
CALCOCO1-216ENST00000549784 NCOA1Q15788 1441 aa15.69■□□□□ 0.1
CALCOCO1-216ENST00000549784 CNTLNQ9NXG0 1405 aa15.68■□□□□ 0.1
CALCOCO1-216ENST00000549784 NCKAP5LQ9HCH0 1330 aa15.68■□□□□ 0.1
CALCOCO1-216ENST00000549784 DISP3Q9P2K9 1392 aa15.67■□□□□ 0.1
CALCOCO1-216ENST00000549784 ZNF644Q9H582 1327 aaPredicted RBP15.67■□□□□ 0.1
CALCOCO1-216ENST00000549784 CFDP1Q9UEE9 299 aaPredicted RBP15.66■□□□□ 0.1
CALCOCO1-216ENST00000549784 NPATQ14207 1427 aa15.65■□□□□ 0.1
CALCOCO1-216ENST00000549784 KIAA1107Q9UPP5 1409 aa15.65■□□□□ 0.1
CALCOCO1-216ENST00000549784 CAMSAP1Q5T5Y3 1602 aa15.65■□□□□ 0.1
CALCOCO1-216ENST00000549784 ATP7AQ04656 1500 aa15.64■□□□□ 0.09
CALCOCO1-216ENST00000549784 GGT6Q6P531 493 aa15.64■□□□□ 0.09
CALCOCO1-216ENST00000549784 SUPT6HQ7KZ85 1726 aaKnown RBP15.64■□□□□ 0.09
CALCOCO1-216ENST00000549784 CCNB3Q8WWL7 1395 aa15.63■□□□□ 0.09
CALCOCO1-216ENST00000549784 PLXNC1O60486 1568 aa15.63■□□□□ 0.09
CALCOCO1-216ENST00000549784 A2MP01023 1474 aa15.63■□□□□ 0.09
CALCOCO1-216ENST00000549784 ZNF335Q9H4Z2 1342 aaPredicted RBP15.63■□□□□ 0.09
CALCOCO1-216ENST00000549784 INO80Q9ULG1 1556 aaPredicted RBP15.62■□□□□ 0.09
CALCOCO1-216ENST00000549784 PTPRKQ15262 1439 aa15.62■□□□□ 0.09
CALCOCO1-216ENST00000549784 MROH2AA6NES4 1674 aa15.61■□□□□ 0.09
CALCOCO1-216ENST00000549784 CLTCQ00610 1675 aaKnown RBP15.6■□□□□ 0.09
CALCOCO1-216ENST00000549784 MTUS2Q5JR59 1369 aa15.6■□□□□ 0.09
CALCOCO1-216ENST00000549784 PLEKHH2Q8IVE3 1493 aa15.59■□□□□ 0.09
CALCOCO1-216ENST00000549784 MBD5Q9P267 1494 aa15.59■□□□□ 0.09
CALCOCO1-216ENST00000549784 IQSEC2Q5JU85 1478 aa15.57■□□□□ 0.08
CALCOCO1-216ENST00000549784 TIAM1Q13009 1591 aa15.57■□□□□ 0.08
CALCOCO1-216ENST00000549784 SOCS7O14512 581 aa15.56■□□□□ 0.08
CALCOCO1-216ENST00000549784 TCOF1Q13428 1488 aaKnown RBP15.56■□□□□ 0.08
CALCOCO1-216ENST00000549784 MYO3AQ8NEV4 1616 aa15.56■□□□□ 0.08
CALCOCO1-216ENST00000549784 FBXO31Q5XUX0 539 aaPredicted RBP15.55■□□□□ 0.08
CALCOCO1-216ENST00000549784 CEP170BQ9Y4F5 1589 aaPredicted RBP15.54■□□□□ 0.08
CALCOCO1-216ENST00000549784 PLA2R1Q13018 1463 aa15.54■□□□□ 0.08
CALCOCO1-216ENST00000549784 PKD2Q13563 968 aa15.54■□□□□ 0.08
CALCOCO1-216ENST00000549784 ZNF142P52746 1687 aaPredicted RBP15.53■□□□□ 0.08
CALCOCO1-216ENST00000549784 SPATA31D1Q6ZQQ2 1576 aa15.53■□□□□ 0.08
CALCOCO1-216ENST00000549784 DHX29Q7Z478 1369 aaKnown RBP15.52■□□□□ 0.08
CALCOCO1-216ENST00000549784 UBAP1LF5GYI3 381 aa15.52■□□□□ 0.08
CALCOCO1-216ENST00000549784 PPP6R1Q9UPN7 881 aa15.52■□□□□ 0.08
CALCOCO1-216ENST00000549784 RTEL1-TNFRSF6BF6WH68 1400 aa15.51■□□□□ 0.07
CALCOCO1-216ENST00000549784 CEP162Q5TB80 1403 aa15.51■□□□□ 0.07
CALCOCO1-216ENST00000549784 EHBP1L1Q8N3D4 1523 aa15.5■□□□□ 0.07
CALCOCO1-216ENST00000549784 KIF3BO15066 747 aa15.5■□□□□ 0.07
CALCOCO1-216ENST00000549784 ADGBQ8N7X0 1667 aa15.5■□□□□ 0.07
CALCOCO1-216ENST00000549784 A2ML1A8K2U0 1454 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms