RNA–Protein interactions for RNA: ENST00000549633.5

SLC38A1-207, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best)

Gene SLC38A1, Length 1,076 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-207ENST00000549633 SCAPERQ9BY12 1400 aa35.1■■■■□ 3.21
SLC38A1-207ENST00000549633 PLCH2O75038 1416 aa35.07■■■■□ 3.21
SLC38A1-207ENST00000549633 EHMT2Q96KQ7 1210 aa35.07■■■■□ 3.2
SLC38A1-207ENST00000549633 MYO5CQ9NQX4 1742 aa35.03■■■■□ 3.2
SLC38A1-207ENST00000549633 ATP1B4Q9UN42 357 aaPredicted RBP35.02■■■■□ 3.2
SLC38A1-207ENST00000549633 KIF14Q15058 1648 aa34.99■■■■□ 3.19
SLC38A1-207ENST00000549633 ARHGEF12Q9NZN5 1544 aa34.97■■■■□ 3.19
SLC38A1-207ENST00000549633 ATP10AO60312 1499 aa34.97■■■■□ 3.19
SLC38A1-207ENST00000549633 C9orf84Q5VXU9 1444 aa34.94■■■■□ 3.18
SLC38A1-207ENST00000549633 PREX1Q8TCU6 1659 aa34.92■■■■□ 3.18
SLC38A1-207ENST00000549633 EFCAB2Q5VUJ9 269 aa34.91■■■■□ 3.18
SLC38A1-207ENST00000549633 ARHGAP35Q9NRY4 1499 aa34.9■■■■□ 3.18
SLC38A1-207ENST00000549633 CEBPAP49715 358 aaPredicted RBP34.9■■■■□ 3.18
SLC38A1-207ENST00000549633 CERKQ8TCT0 537 aa34.9■■■■□ 3.18
SLC38A1-207ENST00000549633 UBTFP17480 764 aaKnown RBP34.89■■■■□ 3.18
SLC38A1-207ENST00000549633 FMN1Q68DA7 1419 aa34.89■■■■□ 3.18
SLC38A1-207ENST00000549633 LRRIQ1Q96JM4 1722 aa34.88■■■■□ 3.17
SLC38A1-207ENST00000549633 ARHGAP5Q13017 1502 aa34.85■■■■□ 3.17
SLC38A1-207ENST00000549633 AFAP1Q8N556 730 aa34.82■■■■□ 3.16
SLC38A1-207ENST00000549633 ZNF518AQ6AHZ1 1483 aa34.82■■■■□ 3.16
SLC38A1-207ENST00000549633 KDM5CP41229 1560 aa34.82■■■■□ 3.16
SLC38A1-207ENST00000549633 TROQ12816 1431 aaPredicted RBP34.81■■■■□ 3.16
SLC38A1-207ENST00000549633 CDK11AQ9UQ88 783 aaPredicted RBP34.79■■■■□ 3.16
SLC38A1-207ENST00000549633 DIP2CQ9Y2E4 1556 aa34.79■■■■□ 3.16
SLC38A1-207ENST00000549633 STRCQ7RTU9 1775 aa34.78■■■■□ 3.16
SLC38A1-207ENST00000549633 CDC42BPBQ9Y5S2 1711 aa34.76■■■■□ 3.16
SLC38A1-207ENST00000549633 MYT1LQ9UL68 1186 aa34.75■■■■□ 3.15
SLC38A1-207ENST00000549633 ABCA6Q8N139 1617 aa34.74■■■■□ 3.15
SLC38A1-207ENST00000549633 CLIP1P30622 1438 aa34.72■■■■□ 3.15
SLC38A1-207ENST00000549633 C3P01024 1663 aa34.68■■■■□ 3.14
SLC38A1-207ENST00000549633 UHRF1BP1Q6BDS2 1440 aa34.68■■■■□ 3.14
SLC38A1-207ENST00000549633 PREX2Q70Z35 1606 aa34.66■■■■□ 3.14
SLC38A1-207ENST00000549633 REREQ9P2R6 1566 aa34.66■■■■□ 3.14
SLC38A1-207ENST00000549633 TRAPPC8Q9Y2L5 1435 aa34.64■■■■□ 3.14
SLC38A1-207ENST00000549633 ITSN2Q9NZM3 1697 aa34.63■■■■□ 3.13
SLC38A1-207ENST00000549633 ABCC1P33527 1531 aa34.63■■■■□ 3.13
SLC38A1-207ENST00000549633 MLH3Q9UHC1 1453 aa34.62■■■■□ 3.13
SLC38A1-207ENST00000549633 SETD1BQ9UPS6 1966 aaKnown RBP34.6■■■■□ 3.13
SLC38A1-207ENST00000549633 DMRT2Q9Y5R5 561 aa34.57■■■■□ 3.12
SLC38A1-207ENST00000549633 KIDINS220Q9ULH0 1771 aa34.56■■■■□ 3.12
SLC38A1-207ENST00000549633 CDC42BPAQ5VT25 1732 aa34.55■■■■□ 3.12
SLC38A1-207ENST00000549633 AGLP35573 1532 aa34.55■■■■□ 3.12
SLC38A1-207ENST00000549633 CHIC1Q5VXU3 224 aa34.5■■■■□ 3.11
SLC38A1-207ENST00000549633 CASKIN1Q8WXD9 1431 aa34.49■■■■□ 3.11
SLC38A1-207ENST00000549633 ESF1Q9H501 851 aaKnown RBP34.49■■■■□ 3.11
SLC38A1-207ENST00000549633 CCDC18Q5T9S5 1454 aa34.49■■■■□ 3.11
SLC38A1-207ENST00000549633 PTPRTO14522 1441 aa34.47■■■■□ 3.11
SLC38A1-207ENST00000549633 DISP3Q9P2K9 1392 aa34.46■■■■□ 3.11
SLC38A1-207ENST00000549633 ILDR2Q71H61 639 aa34.44■■■■□ 3.1
SLC38A1-207ENST00000549633 SAMD9LQ8IVG5 1584 aa34.43■■■■□ 3.1
SLC38A1-207ENST00000549633 LTBP4Q8N2S1 1624 aa34.41■■■■□ 3.1
SLC38A1-207ENST00000549633 ZNF777Q9ULD5 760 aaPredicted RBP34.4■■■■□ 3.1
SLC38A1-207ENST00000549633 SUPT6HQ7KZ85 1726 aaKnown RBP34.38■■■■□ 3.09
SLC38A1-207ENST00000549633 SYCP2Q9BX26 1530 aa34.38■■■■□ 3.09
SLC38A1-207ENST00000549633 NCOA1Q15788 1441 aa34.38■■■■□ 3.09
SLC38A1-207ENST00000549633 CNTLNQ9NXG0 1405 aa34.37■■■■□ 3.09
SLC38A1-207ENST00000549633 MROH2AA6NES4 1674 aa34.35■■■■□ 3.09
SLC38A1-207ENST00000549633 FYCO1Q9BQS8 1478 aa34.33■■■■□ 3.09
SLC38A1-207ENST00000549633 CAMSAP1Q5T5Y3 1602 aa34.33■■■■□ 3.09
SLC38A1-207ENST00000549633 HNRNPMP52272 730 aaKnown RBP eCLIP34.31■■■■□ 3.086e-7■■■■□ 23.4
SLC38A1-207ENST00000549633 GPATCH8Q9UKJ3 1502 aaKnown RBP34.3■■■■□ 3.08
SLC38A1-207ENST00000549633 CLTCQ00610 1675 aaKnown RBP34.3■■■■□ 3.08
SLC38A1-207ENST00000549633 SPATA31D1Q6ZQQ2 1576 aa34.28■■■■□ 3.08
SLC38A1-207ENST00000549633 SPAG9O60271 1321 aaKnown RBP34.28■■■■□ 3.08
SLC38A1-207ENST00000549633 ZMYM3Q14202 1370 aa34.27■■■■□ 3.08
SLC38A1-207ENST00000549633 ATP7AQ04656 1500 aa34.26■■■■□ 3.08
SLC38A1-207ENST00000549633 NPATQ14207 1427 aa34.26■■■■□ 3.07
SLC38A1-207ENST00000549633 INO80Q9ULG1 1556 aaPredicted RBP34.24■■■■□ 3.07
SLC38A1-207ENST00000549633 NCKAP5LQ9HCH0 1330 aa34.23■■■■□ 3.07
SLC38A1-207ENST00000549633 PLXNC1O60486 1568 aa34.22■■■■□ 3.07
SLC38A1-207ENST00000549633 MYO3AQ8NEV4 1616 aa34.22■■■■□ 3.07
SLC38A1-207ENST00000549633 IQSEC2Q5JU85 1478 aa34.2■■■■□ 3.07
SLC38A1-207ENST00000549633 SOCS7O14512 581 aa34.19■■■■□ 3.06
SLC38A1-207ENST00000549633 A2MP01023 1474 aa34.18■■■■□ 3.06
SLC38A1-207ENST00000549633 ZNF142P52746 1687 aaPredicted RBP34.18■■■■□ 3.06
SLC38A1-207ENST00000549633 ZNF335Q9H4Z2 1342 aaPredicted RBP34.16■■■■□ 3.06
SLC38A1-207ENST00000549633 CFDP1Q9UEE9 299 aaPredicted RBP34.15■■■■□ 3.06
SLC38A1-207ENST00000549633 KIAA1107Q9UPP5 1409 aa34.13■■■■□ 3.05
SLC38A1-207ENST00000549633 CEP170BQ9Y4F5 1589 aaPredicted RBP34.13■■■■□ 3.05
SLC38A1-207ENST00000549633 CCNB3Q8WWL7 1395 aa34.12■■■■□ 3.05
SLC38A1-207ENST00000549633 GGT6Q6P531 493 aa34.12■■■■□ 3.05
SLC38A1-207ENST00000549633 PLEKHH2Q8IVE3 1493 aa34.12■■■■□ 3.05
SLC38A1-207ENST00000549633 PTPRKQ15262 1439 aa34.12■■■■□ 3.05
SLC38A1-207ENST00000549633 ADGBQ8N7X0 1667 aa34.09■■■■□ 3.05
SLC38A1-207ENST00000549633 PLA2R1Q13018 1463 aa34.06■■■■□ 3.04
SLC38A1-207ENST00000549633 ZNF644Q9H582 1327 aaPredicted RBP34.05■■■■□ 3.04
SLC38A1-207ENST00000549633 TCOF1Q13428 1488 aaKnown RBP34.05■■■■□ 3.04
SLC38A1-207ENST00000549633 TIAM1Q13009 1591 aa34.04■■■■□ 3.04
SLC38A1-207ENST00000549633 MTUS2Q5JR59 1369 aa34.04■■■■□ 3.04
SLC38A1-207ENST00000549633 UBAP1LF5GYI3 381 aa34.02■■■■□ 3.04
SLC38A1-207ENST00000549633 PKD2Q13563 968 aa34.01■■■■□ 3.03
SLC38A1-207ENST00000549633 MBD5Q9P267 1494 aa33.96■■■■□ 3.03
SLC38A1-207ENST00000549633 DNMT1P26358 1616 aaKnown RBP33.96■■■■□ 3.03
SLC38A1-207ENST00000549633 PPP6R1Q9UPN7 881 aa33.93■■■■□ 3.02
SLC38A1-207ENST00000549633 A2ML1A8K2U0 1454 aa33.93■■■■□ 3.02
SLC38A1-207ENST00000549633 EHBP1L1Q8N3D4 1523 aa33.92■■■■□ 3.02
SLC38A1-207ENST00000549633 POLR1AO95602 1720 aaPredicted RBP33.88■■■■□ 3.01
SLC38A1-207ENST00000549633 RTEL1-TNFRSF6BF6WH68 1400 aa33.87■■■■□ 3.01
SLC38A1-207ENST00000549633 FBXO31Q5XUX0 539 aaPredicted RBP33.86■■■■□ 3.01
SLC38A1-207ENST00000549633 DHX29Q7Z478 1369 aaKnown RBP33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms