RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
TROAP-209ENST00000549275 PIP4K2BP78356 416 aa19.01■□□□□ 0.63
TROAP-209ENST00000549275 GOLGA3Q08378 1498 aa19.01■□□□□ 0.63
TROAP-209ENST00000549275 ATP10BO94823 1461 aa19■□□□□ 0.63
TROAP-209ENST00000549275 FAM9AQ8IZU1 332 aaPredicted RBP18.98■□□□□ 0.63
TROAP-209ENST00000549275 TRAPPC8Q9Y2L5 1435 aa18.97■□□□□ 0.63
TROAP-209ENST00000549275 RGS17Q9UGC6 210 aaPredicted RBP18.96■□□□□ 0.63
TROAP-209ENST00000549275 ATP10AO60312 1499 aa18.96■□□□□ 0.63
TROAP-209ENST00000549275 C9orf84Q5VXU9 1444 aa18.95■□□□□ 0.62
TROAP-209ENST00000549275 CFAP74Q9C0B2 1584 aa18.93■□□□□ 0.62
TROAP-209ENST00000549275 PKD2Q13563 968 aa18.91■□□□□ 0.62
TROAP-209ENST00000549275 CAMSAP1Q5T5Y3 1602 aa18.89■□□□□ 0.62
TROAP-209ENST00000549275 HECW1Q76N89 1606 aa18.89■□□□□ 0.62
TROAP-209ENST00000549275 ARID3CA6NKF2 412 aa18.89■□□□□ 0.61
TROAP-209ENST00000549275 RAPGEF2Q9Y4G8 1499 aa18.89■□□□□ 0.61
TROAP-209ENST00000549275 NCKAP5LQ9HCH0 1330 aa18.87■□□□□ 0.61
TROAP-209ENST00000549275 PTPRKQ15262 1439 aa18.85■□□□□ 0.61
TROAP-209ENST00000549275 PLA2R1Q13018 1463 aa18.83■□□□□ 0.6
TROAP-209ENST00000549275 C3P01024 1663 aa18.82■□□□□ 0.6
TROAP-209ENST00000549275 ESF1Q9H501 851 aaKnown RBP18.82■□□□□ 0.6
TROAP-209ENST00000549275 CPS1P31327 1500 aa18.82■□□□□ 0.6
TROAP-209ENST00000549275 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
TROAP-209ENST00000549275 NPATQ14207 1427 aa18.78■□□□□ 0.6
TROAP-209ENST00000549275 POTEAQ6S8J7 498 aa18.78■□□□□ 0.6
TROAP-209ENST00000549275 TCOF1Q13428 1488 aaKnown RBP18.77■□□□□ 0.6
TROAP-209ENST00000549275 SCAPERQ9BY12 1400 aa18.77■□□□□ 0.6
TROAP-209ENST00000549275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.77■□□□□ 0.6
TROAP-209ENST00000549275 HNRNPUL2Q1KMD3 747 aaKnown RBP18.77■□□□□ 0.6
TROAP-209ENST00000549275 CNTLNQ9NXG0 1405 aa18.75■□□□□ 0.59
TROAP-209ENST00000549275 AGLP35573 1532 aa18.72■□□□□ 0.59
TROAP-209ENST00000549275 PLEKHD1A6NEE1 506 aa18.71■□□□□ 0.59
TROAP-209ENST00000549275 UPF1Q92900 1129 aaKnown RBP eCLIP18.7■□□□□ 0.58
TROAP-209ENST00000549275 REREQ9P2R6 1566 aa18.7■□□□□ 0.58
TROAP-209ENST00000549275 SRCAPQ6ZRS2 3230 aa18.69■□□□□ 0.58
TROAP-209ENST00000549275 SHANK2Q9UPX8 1470 aa18.69■□□□□ 0.58
TROAP-209ENST00000549275 ALKQ9UM73 1620 aa18.68■□□□□ 0.58
TROAP-209ENST00000549275 CTTNBP2Q8WZ74 1663 aa18.67■□□□□ 0.58
TROAP-209ENST00000549275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.67■□□□□ 0.58
TROAP-209ENST00000549275 PLCH2O75038 1416 aa18.62■□□□□ 0.57
TROAP-209ENST00000549275 ZNF518AQ6AHZ1 1483 aa18.62■□□□□ 0.57
TROAP-209ENST00000549275 RAPGEF6Q8TEU7 1601 aa18.62■□□□□ 0.57
TROAP-209ENST00000549275 ZNF142P52746 1687 aaPredicted RBP18.6■□□□□ 0.57
TROAP-209ENST00000549275 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
TROAP-209ENST00000549275 SETD1AO15047 1707 aaKnown RBP18.59■□□□□ 0.57
TROAP-209ENST00000549275 NUP153P49790 1475 aaKnown RBP18.58■□□□□ 0.57
TROAP-209ENST00000549275 ZMYM3Q14202 1370 aa18.58■□□□□ 0.57
TROAP-209ENST00000549275 EFCAB2Q5VUJ9 269 aa18.58■□□□□ 0.56
TROAP-209ENST00000549275 CEP170BQ9Y4F5 1589 aaPredicted RBP18.58■□□□□ 0.56
TROAP-209ENST00000549275 DIP2CQ9Y2E4 1556 aa18.57■□□□□ 0.56
TROAP-209ENST00000549275 KDM5CP41229 1560 aa18.56■□□□□ 0.56
TROAP-209ENST00000549275 P3H3Q8IVL6 736 aa18.56■□□□□ 0.56
TROAP-209ENST00000549275 MROH2AA6NES4 1674 aa18.55■□□□□ 0.56
TROAP-209ENST00000549275 MYT1LQ9UL68 1186 aa18.55■□□□□ 0.56
TROAP-209ENST00000549275 MYO3AQ8NEV4 1616 aa18.54■□□□□ 0.56
TROAP-209ENST00000549275 AFAP1Q8N556 730 aa18.52■□□□□ 0.56
TROAP-209ENST00000549275 MLH3Q9UHC1 1453 aa18.52■□□□□ 0.55
TROAP-209ENST00000549275 SUPT6HQ7KZ85 1726 aaKnown RBP18.51■□□□□ 0.55
TROAP-209ENST00000549275 SUPT5HO00267 1087 aaKnown RBP18.49■□□□□ 0.55
TROAP-209ENST00000549275 VWDEQ8N2E2 1590 aa18.49■□□□□ 0.55
TROAP-209ENST00000549275 RNF17Q9BXT8 1623 aaKnown RBP18.48■□□□□ 0.55
TROAP-209ENST00000549275 A2ML1A8K2U0 1454 aa18.46■□□□□ 0.54
TROAP-209ENST00000549275 ABCA6Q8N139 1617 aa18.45■□□□□ 0.54
TROAP-209ENST00000549275 NEURL4Q96JN8 1562 aa18.44■□□□□ 0.54
TROAP-209ENST00000549275 LRRC7Q96NW7 1537 aa18.44■□□□□ 0.54
TROAP-209ENST00000549275 FAM135BQ49AJ0 1406 aa18.41■□□□□ 0.54
TROAP-209ENST00000549275 FOXD1Q16676 465 aa18.41■□□□□ 0.54
TROAP-209ENST00000549275 ANKLE2Q86XL3 938 aa18.41■□□□□ 0.54
TROAP-209ENST00000549275 SAMD9Q5K651 1589 aa18.4■□□□□ 0.54
TROAP-209ENST00000549275 DNMT1P26358 1616 aaKnown RBP18.4■□□□□ 0.54
TROAP-209ENST00000549275 POLR1AO95602 1720 aaPredicted RBP18.4■□□□□ 0.54
TROAP-209ENST00000549275 SYNMO15061 1565 aa18.38■□□□□ 0.53
TROAP-209ENST00000549275 MED14O60244 1454 aa18.37■□□□□ 0.53
TROAP-209ENST00000549275 ZNF772Q68DY9 489 aaPredicted RBP18.36■□□□□ 0.53
TROAP-209ENST00000549275 TRIM52Q96A61 297 aa18.36■□□□□ 0.53
TROAP-209ENST00000549275 NPHP4O75161 1426 aaPredicted RBP18.35■□□□□ 0.53
TROAP-209ENST00000549275 MYO5CQ9NQX4 1742 aa18.33■□□□□ 0.52
TROAP-209ENST00000549275 PRXQ9BXM0 1461 aa18.33■□□□□ 0.52
TROAP-209ENST00000549275 ZRANB1Q9UGI0 708 aa18.31■□□□□ 0.52
TROAP-209ENST00000549275 CDK12Q9NYV4 1490 aaPredicted RBP18.31■□□□□ 0.52
TROAP-209ENST00000549275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.3■□□□□ 0.52
TROAP-209ENST00000549275 ARHGAP5Q13017 1502 aa18.29■□□□□ 0.52
TROAP-209ENST00000549275 THEMISQ8N1K5 641 aaPredicted RBP18.29■□□□□ 0.52
TROAP-209ENST00000549275 CLTCQ00610 1675 aaKnown RBP18.28■□□□□ 0.52
TROAP-209ENST00000549275 DEPDC5O75140 1603 aa18.28■□□□□ 0.52
TROAP-209ENST00000549275 RXRBP28702 533 aa18.28■□□□□ 0.52
TROAP-209ENST00000549275 CDK13Q14004 1512 aaKnown RBP18.26■□□□□ 0.51
TROAP-209ENST00000549275 JCADQ9P266 1359 aa18.26■□□□□ 0.51
TROAP-209ENST00000549275 KIDINS220Q9ULH0 1771 aa18.24■□□□□ 0.51
TROAP-209ENST00000549275 STRCP1A6NGW2 1772 aa18.23■□□□□ 0.51
TROAP-209ENST00000549275 IFFO2Q5TF58 517 aa18.22■□□□□ 0.51
TROAP-209ENST00000549275 ABCC1P33527 1531 aa18.22■□□□□ 0.51
TROAP-209ENST00000549275 TNRQ92752 1358 aa18.21■□□□□ 0.51
TROAP-209ENST00000549275 IQGAP1P46940 1657 aa18.21■□□□□ 0.51
TROAP-209ENST00000549275 CDK11AQ9UQ88 783 aaPredicted RBP18.2■□□□□ 0.5
TROAP-209ENST00000549275 RBM33Q96EV2 1170 aaKnown RBP18.19■□□□□ 0.5
TROAP-209ENST00000549275 SPATA31A6Q5VVP1 1343 aa18.19■□□□□ 0.5
TROAP-209ENST00000549275 KDM5DQ9BY66 1539 aa18.18■□□□□ 0.5
TROAP-209ENST00000549275 FAM135AQ9P2D6 1515 aa18.18■□□□□ 0.5
TROAP-209ENST00000549275 GGT6Q6P531 493 aa18.18■□□□□ 0.5
TROAP-209ENST00000549275 MEX3CQ5U5Q3 659 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms