RNA–Protein interactions for RNA: ENST00000548720.5

PFKM-213, Transcript of phosphofructokinase, muscle, humanhuman

TSL 2

Gene PFKM, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-213ENST00000548720 KIF14Q15058 1648 aa17.47■□□□□ 0.39
PFKM-213ENST00000548720 PREX1Q8TCU6 1659 aa17.47■□□□□ 0.39
PFKM-213ENST00000548720 ARHGEF12Q9NZN5 1544 aa17.47■□□□□ 0.39
PFKM-213ENST00000548720 SCAPERQ9BY12 1400 aa17.46■□□□□ 0.39
PFKM-213ENST00000548720 MLECQ14165 292 aa17.45■□□□□ 0.38
PFKM-213ENST00000548720 PLCH2O75038 1416 aa17.45■□□□□ 0.38
PFKM-213ENST00000548720 LRRIQ1Q96JM4 1722 aa17.44■□□□□ 0.38
PFKM-213ENST00000548720 C9orf84Q5VXU9 1444 aa17.41■□□□□ 0.38
PFKM-213ENST00000548720 ATP10AO60312 1499 aa17.41■□□□□ 0.38
PFKM-213ENST00000548720 STRCQ7RTU9 1775 aa17.4■□□□□ 0.38
PFKM-213ENST00000548720 KDM5CP41229 1560 aa17.39■□□□□ 0.37
PFKM-213ENST00000548720 DIP2CQ9Y2E4 1556 aa17.38■□□□□ 0.37
PFKM-213ENST00000548720 ARHGAP35Q9NRY4 1499 aa17.37■□□□□ 0.37
PFKM-213ENST00000548720 ABCA6Q8N139 1617 aa17.37■□□□□ 0.37
PFKM-213ENST00000548720 CERKQ8TCT0 537 aa17.37■□□□□ 0.37
PFKM-213ENST00000548720 ARHGAP5Q13017 1502 aa17.36■□□□□ 0.37
PFKM-213ENST00000548720 CDC42BPBQ9Y5S2 1711 aa17.35■□□□□ 0.37
PFKM-213ENST00000548720 ZNF518AQ6AHZ1 1483 aa17.35■□□□□ 0.37
PFKM-213ENST00000548720 C3P01024 1663 aa17.34■□□□□ 0.37
PFKM-213ENST00000548720 CEBPAP49715 358 aaPredicted RBP17.34■□□□□ 0.37
PFKM-213ENST00000548720 FMN1Q68DA7 1419 aa17.34■□□□□ 0.37
PFKM-213ENST00000548720 EHMT2Q96KQ7 1210 aa17.34■□□□□ 0.37
PFKM-213ENST00000548720 PREX2Q70Z35 1606 aa17.32■□□□□ 0.36
PFKM-213ENST00000548720 ATP1B4Q9UN42 357 aaPredicted RBP17.32■□□□□ 0.36
PFKM-213ENST00000548720 ITSN2Q9NZM3 1697 aa17.32■□□□□ 0.36
PFKM-213ENST00000548720 REREQ9P2R6 1566 aa17.32■□□□□ 0.36
PFKM-213ENST00000548720 TROQ12816 1431 aaPredicted RBP17.31■□□□□ 0.36
PFKM-213ENST00000548720 EFCAB2Q5VUJ9 269 aa17.31■□□□□ 0.36
PFKM-213ENST00000548720 ABCC1P33527 1531 aa17.29■□□□□ 0.36
PFKM-213ENST00000548720 AFAP1Q8N556 730 aa17.28■□□□□ 0.36
PFKM-213ENST00000548720 UHRF1BP1Q6BDS2 1440 aa17.28■□□□□ 0.36
PFKM-213ENST00000548720 CLIP1P30622 1438 aa17.27■□□□□ 0.35
PFKM-213ENST00000548720 CDC42BPAQ5VT25 1732 aa17.26■□□□□ 0.35
PFKM-213ENST00000548720 KIDINS220Q9ULH0 1771 aa17.25■□□□□ 0.35
PFKM-213ENST00000548720 UBTFP17480 764 aaKnown RBP17.25■□□□□ 0.35
PFKM-213ENST00000548720 MLH3Q9UHC1 1453 aa17.24■□□□□ 0.35
PFKM-213ENST00000548720 TRAPPC8Q9Y2L5 1435 aa17.24■□□□□ 0.35
PFKM-213ENST00000548720 SETD1BQ9UPS6 1966 aaKnown RBP17.24■□□□□ 0.35
PFKM-213ENST00000548720 AGLP35573 1532 aa17.23■□□□□ 0.35
PFKM-213ENST00000548720 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
PFKM-213ENST00000548720 MYT1LQ9UL68 1186 aa17.21■□□□□ 0.35
PFKM-213ENST00000548720 LTBP4Q8N2S1 1624 aa17.2■□□□□ 0.34
PFKM-213ENST00000548720 SPATA31D1Q6ZQQ2 1576 aa17.19■□□□□ 0.34
PFKM-213ENST00000548720 DISP3Q9P2K9 1392 aa17.18■□□□□ 0.34
PFKM-213ENST00000548720 MROH2AA6NES4 1674 aa17.18■□□□□ 0.34
PFKM-213ENST00000548720 PTPRTO14522 1441 aa17.18■□□□□ 0.34
PFKM-213ENST00000548720 SAMD9LQ8IVG5 1584 aa17.18■□□□□ 0.34
PFKM-213ENST00000548720 CCDC18Q5T9S5 1454 aa17.18■□□□□ 0.34
PFKM-213ENST00000548720 ILDR2Q71H61 639 aa17.17■□□□□ 0.34
PFKM-213ENST00000548720 SUPT6HQ7KZ85 1726 aaKnown RBP17.16■□□□□ 0.34
PFKM-213ENST00000548720 DMRT2Q9Y5R5 561 aa17.16■□□□□ 0.34
PFKM-213ENST00000548720 SYCP2Q9BX26 1530 aa17.16■□□□□ 0.34
PFKM-213ENST00000548720 NCOA1Q15788 1441 aa17.15■□□□□ 0.34
PFKM-213ENST00000548720 CASKIN1Q8WXD9 1431 aa17.15■□□□□ 0.34
PFKM-213ENST00000548720 CAMSAP1Q5T5Y3 1602 aa17.14■□□□□ 0.33
PFKM-213ENST00000548720 CLTCQ00610 1675 aaKnown RBP17.13■□□□□ 0.33
PFKM-213ENST00000548720 MYO3AQ8NEV4 1616 aa17.13■□□□□ 0.33
PFKM-213ENST00000548720 ZNF142P52746 1687 aaPredicted RBP17.12■□□□□ 0.33
PFKM-213ENST00000548720 CNTLNQ9NXG0 1405 aa17.12■□□□□ 0.33
PFKM-213ENST00000548720 INO80Q9ULG1 1556 aaPredicted RBP17.11■□□□□ 0.33
PFKM-213ENST00000548720 PLXNC1O60486 1568 aa17.11■□□□□ 0.33
PFKM-213ENST00000548720 FYCO1Q9BQS8 1478 aa17.1■□□□□ 0.33
PFKM-213ENST00000548720 ESF1Q9H501 851 aaKnown RBP17.09■□□□□ 0.33
PFKM-213ENST00000548720 ATP7AQ04656 1500 aa17.09■□□□□ 0.33
PFKM-213ENST00000548720 IQSEC2Q5JU85 1478 aa17.08■□□□□ 0.32
PFKM-213ENST00000548720 NPATQ14207 1427 aa17.07■□□□□ 0.32
PFKM-213ENST00000548720 GPATCH8Q9UKJ3 1502 aaKnown RBP17.06■□□□□ 0.32
PFKM-213ENST00000548720 SOCS7O14512 581 aa17.05■□□□□ 0.32
PFKM-213ENST00000548720 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
PFKM-213ENST00000548720 CEP170BQ9Y4F5 1589 aaPredicted RBP17.05■□□□□ 0.32
PFKM-213ENST00000548720 ZNF777Q9ULD5 760 aaPredicted RBP17.04■□□□□ 0.32
PFKM-213ENST00000548720 ADGBQ8N7X0 1667 aa17.03■□□□□ 0.32
PFKM-213ENST00000548720 ZMYM3Q14202 1370 aa17.02■□□□□ 0.32
PFKM-213ENST00000548720 SPAG9O60271 1321 aaKnown RBP17.01■□□□□ 0.31
PFKM-213ENST00000548720 NCKAP5LQ9HCH0 1330 aa17.01■□□□□ 0.31
PFKM-213ENST00000548720 A2MP01023 1474 aa17.01■□□□□ 0.31
PFKM-213ENST00000548720 ZNF335Q9H4Z2 1342 aaPredicted RBP17■□□□□ 0.31
PFKM-213ENST00000548720 HNRNPMP52272 730 aaKnown RBP eCLIP17■□□□□ 0.31
PFKM-213ENST00000548720 PTPRKQ15262 1439 aa17■□□□□ 0.31
PFKM-213ENST00000548720 PLA2R1Q13018 1463 aa16.99■□□□□ 0.31
PFKM-213ENST00000548720 TCOF1Q13428 1488 aaKnown RBP16.99■□□□□ 0.31
PFKM-213ENST00000548720 TIAM1Q13009 1591 aa16.98■□□□□ 0.31
PFKM-213ENST00000548720 PLEKHH2Q8IVE3 1493 aa16.98■□□□□ 0.31
PFKM-213ENST00000548720 KIAA1107Q9UPP5 1409 aa16.97■□□□□ 0.31
PFKM-213ENST00000548720 POLR1AO95602 1720 aaPredicted RBP16.97■□□□□ 0.31
PFKM-213ENST00000548720 DNMT1P26358 1616 aaKnown RBP16.95■□□□□ 0.3
PFKM-213ENST00000548720 CCNB3Q8WWL7 1395 aa16.94■□□□□ 0.3
PFKM-213ENST00000548720 NEURL4Q96JN8 1562 aa16.93■□□□□ 0.3
PFKM-213ENST00000548720 GGT6Q6P531 493 aa16.92■□□□□ 0.3
PFKM-213ENST00000548720 CFDP1Q9UEE9 299 aaPredicted RBP16.92■□□□□ 0.3
PFKM-213ENST00000548720 UBAP1LF5GYI3 381 aa16.91■□□□□ 0.3
PFKM-213ENST00000548720 A2ML1A8K2U0 1454 aa16.91■□□□□ 0.3
PFKM-213ENST00000548720 ZNF644Q9H582 1327 aaPredicted RBP16.91■□□□□ 0.3
PFKM-213ENST00000548720 EHBP1L1Q8N3D4 1523 aa16.91■□□□□ 0.3
PFKM-213ENST00000548720 MBD5Q9P267 1494 aa16.9■□□□□ 0.3
PFKM-213ENST00000548720 PKD2Q13563 968 aa16.89■□□□□ 0.29
PFKM-213ENST00000548720 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.29
PFKM-213ENST00000548720 PPP6R1Q9UPN7 881 aa16.87■□□□□ 0.29
PFKM-213ENST00000548720 KDM5DQ9BY66 1539 aa16.86■□□□□ 0.29
PFKM-213ENST00000548720 MED1Q15648 1581 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms