RNA–Protein interactions for RNA: ENST00000548664.1

VDR-205, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-205ENST00000548664 PLCH2O75038 1416 aa28.42■■■□□ 2.14
VDR-205ENST00000548664 SCAPERQ9BY12 1400 aa28.4■■■□□ 2.14
VDR-205ENST00000548664 ARHGEF12Q9NZN5 1544 aa28.38■■■□□ 2.13
VDR-205ENST00000548664 PREX1Q8TCU6 1659 aa28.37■■■□□ 2.13
VDR-205ENST00000548664 MLECQ14165 292 aa28.36■■■□□ 2.13
VDR-205ENST00000548664 ATP10AO60312 1499 aa28.34■■■□□ 2.13
VDR-205ENST00000548664 C9orf84Q5VXU9 1444 aa28.33■■■□□ 2.13
VDR-205ENST00000548664 KIF14Q15058 1648 aa28.31■■■□□ 2.12
VDR-205ENST00000548664 CERKQ8TCT0 537 aa28.29■■■□□ 2.12
VDR-205ENST00000548664 FMN1Q68DA7 1419 aa28.26■■■□□ 2.12
VDR-205ENST00000548664 KDM5CP41229 1560 aa28.26■■■□□ 2.11
VDR-205ENST00000548664 ZNF518AQ6AHZ1 1483 aa28.25■■■□□ 2.11
VDR-205ENST00000548664 STRCQ7RTU9 1775 aa28.24■■■□□ 2.11
VDR-205ENST00000548664 LRRIQ1Q96JM4 1722 aa28.24■■■□□ 2.11
VDR-205ENST00000548664 EFCAB2Q5VUJ9 269 aa28.24■■■□□ 2.11
VDR-205ENST00000548664 ARHGAP35Q9NRY4 1499 aa28.22■■■□□ 2.11
VDR-205ENST00000548664 ARHGAP5Q13017 1502 aa28.2■■■□□ 2.1
VDR-205ENST00000548664 ATP1B4Q9UN42 357 aaPredicted RBP28.19■■■□□ 2.1
VDR-205ENST00000548664 DIP2CQ9Y2E4 1556 aa28.19■■■□□ 2.1
VDR-205ENST00000548664 CDC42BPBQ9Y5S2 1711 aa28.18■■■□□ 2.1
VDR-205ENST00000548664 CEBPAP49715 358 aaPredicted RBP28.18■■■□□ 2.1
VDR-205ENST00000548664 TROQ12816 1431 aaPredicted RBP28.18■■■□□ 2.1
VDR-205ENST00000548664 SETD1BQ9UPS6 1966 aaKnown RBP28.17■■■□□ 2.1
VDR-205ENST00000548664 REREQ9P2R6 1566 aa28.17■■■□□ 2.1
VDR-205ENST00000548664 CDK11AQ9UQ88 783 aaPredicted RBP28.17■■■□□ 2.1
VDR-205ENST00000548664 ABCA6Q8N139 1617 aa28.15■■■□□ 2.1
VDR-205ENST00000548664 C3P01024 1663 aa28.14■■■□□ 2.1
VDR-205ENST00000548664 AFAP1Q8N556 730 aa28.13■■■□□ 2.09
VDR-205ENST00000548664 CLIP1P30622 1438 aa28.12■■■□□ 2.09
VDR-205ENST00000548664 UHRF1BP1Q6BDS2 1440 aa28.12■■■□□ 2.09
VDR-205ENST00000548664 UBTFP17480 764 aaKnown RBP28.12■■■□□ 2.09
VDR-205ENST00000548664 PREX2Q70Z35 1606 aa28.1■■■□□ 2.09
VDR-205ENST00000548664 EHMT2Q96KQ7 1210 aa28.09■■■□□ 2.09
VDR-205ENST00000548664 MLH3Q9UHC1 1453 aa28.08■■■□□ 2.09
VDR-205ENST00000548664 ITSN2Q9NZM3 1697 aa28.08■■■□□ 2.09
VDR-205ENST00000548664 ABCC1P33527 1531 aa28.07■■■□□ 2.08
VDR-205ENST00000548664 DMRT2Q9Y5R5 561 aa28.06■■■□□ 2.08
VDR-205ENST00000548664 AGLP35573 1532 aa28.05■■■□□ 2.08
VDR-205ENST00000548664 MYT1LQ9UL68 1186 aa28.03■■■□□ 2.08
VDR-205ENST00000548664 KIDINS220Q9ULH0 1771 aa28.02■■■□□ 2.08
VDR-205ENST00000548664 CDC42BPAQ5VT25 1732 aa28.01■■■□□ 2.07
VDR-205ENST00000548664 TRAPPC8Q9Y2L5 1435 aa28.01■■■□□ 2.07
VDR-205ENST00000548664 PTPRTO14522 1441 aa27.99■■■□□ 2.07
VDR-205ENST00000548664 CCDC18Q5T9S5 1454 aa27.95■■■□□ 2.07
VDR-205ENST00000548664 LTBP4Q8N2S1 1624 aa27.93■■■□□ 2.06
VDR-205ENST00000548664 DISP3Q9P2K9 1392 aa27.93■■■□□ 2.06
VDR-205ENST00000548664 MROH2AA6NES4 1674 aa27.92■■■□□ 2.06
VDR-205ENST00000548664 CASKIN1Q8WXD9 1431 aa27.92■■■□□ 2.06
VDR-205ENST00000548664 CNTLNQ9NXG0 1405 aa27.91■■■□□ 2.06
VDR-205ENST00000548664 ESF1Q9H501 851 aaKnown RBP27.9■■■□□ 2.06
VDR-205ENST00000548664 ILDR2Q71H61 639 aa27.89■■■□□ 2.06
VDR-205ENST00000548664 SAMD9LQ8IVG5 1584 aa27.89■■■□□ 2.05
VDR-205ENST00000548664 NCOA1Q15788 1441 aa27.88■■■□□ 2.05
VDR-205ENST00000548664 SPATA31D1Q6ZQQ2 1576 aa27.86■■■□□ 2.05
VDR-205ENST00000548664 IQSEC2Q5JU85 1478 aa27.85■■■□□ 2.05
VDR-205ENST00000548664 SUPT6HQ7KZ85 1726 aaKnown RBP27.84■■■□□ 2.05
VDR-205ENST00000548664 CAMSAP1Q5T5Y3 1602 aa27.83■■■□□ 2.05
VDR-205ENST00000548664 SYCP2Q9BX26 1530 aa27.82■■■□□ 2.04
VDR-205ENST00000548664 NPATQ14207 1427 aa27.82■■■□□ 2.04
VDR-205ENST00000548664 FYCO1Q9BQS8 1478 aa27.81■■■□□ 2.04
VDR-205ENST00000548664 ZNF142P52746 1687 aaPredicted RBP27.78■■■□□ 2.04
VDR-205ENST00000548664 CLTCQ00610 1675 aaKnown RBP27.78■■■□□ 2.04
VDR-205ENST00000548664 SOCS7O14512 581 aa27.78■■■□□ 2.04
VDR-205ENST00000548664 CHIC1Q5VXU3 224 aa27.77■■■□□ 2.04
VDR-205ENST00000548664 PLXNC1O60486 1568 aa27.77■■■□□ 2.04
VDR-205ENST00000548664 INO80Q9ULG1 1556 aaPredicted RBP27.77■■■□□ 2.04
VDR-205ENST00000548664 GPATCH8Q9UKJ3 1502 aaKnown RBP27.77■■■□□ 2.04
VDR-205ENST00000548664 MYO3AQ8NEV4 1616 aa27.76■■■□□ 2.03
VDR-205ENST00000548664 ATP7AQ04656 1500 aa27.76■■■□□ 2.03
VDR-205ENST00000548664 ZMYM3Q14202 1370 aa27.74■■■□□ 2.03
VDR-205ENST00000548664 ZNF777Q9ULD5 760 aaPredicted RBP27.73■■■□□ 2.03
VDR-205ENST00000548664 SPAG9O60271 1321 aaKnown RBP27.71■■■□□ 2.03
VDR-205ENST00000548664 CEP170BQ9Y4F5 1589 aaPredicted RBP27.69■■■□□ 2.02
VDR-205ENST00000548664 KIAA1107Q9UPP5 1409 aa27.68■■■□□ 2.02
VDR-205ENST00000548664 HNRNPMP52272 730 aaKnown RBP eCLIP27.68■■■□□ 2.02
VDR-205ENST00000548664 A2MP01023 1474 aa27.67■■■□□ 2.02
VDR-205ENST00000548664 PLA2R1Q13018 1463 aa27.67■■■□□ 2.02
VDR-205ENST00000548664 ADGBQ8N7X0 1667 aa27.66■■■□□ 2.02
VDR-205ENST00000548664 PLEKHH2Q8IVE3 1493 aa27.66■■■□□ 2.02
VDR-205ENST00000548664 NCKAP5LQ9HCH0 1330 aa27.66■■■□□ 2.02
VDR-205ENST00000548664 PTPRKQ15262 1439 aa27.65■■■□□ 2.02
VDR-205ENST00000548664 ZNF335Q9H4Z2 1342 aaPredicted RBP27.64■■■□□ 2.01
VDR-205ENST00000548664 TCOF1Q13428 1488 aaKnown RBP27.64■■■□□ 2.01
VDR-205ENST00000548664 CFDP1Q9UEE9 299 aaPredicted RBP27.59■■■□□ 2.01
VDR-205ENST00000548664 CCNB3Q8WWL7 1395 aa27.59■■■□□ 2.01
VDR-205ENST00000548664 PKD2Q13563 968 aa27.58■■■□□ 2.01
VDR-205ENST00000548664 GGT6Q6P531 493 aa27.55■■■□□ 2
VDR-205ENST00000548664 TIAM1Q13009 1591 aa27.55■■■□□ 2
VDR-205ENST00000548664 DNMT1P26358 1616 aaKnown RBP27.54■■■□□ 2
VDR-205ENST00000548664 POLR1AO95602 1720 aaPredicted RBP27.53■■■□□ 2
VDR-205ENST00000548664 UBAP1LF5GYI3 381 aa27.52■■■□□ 2
VDR-205ENST00000548664 PPP6R1Q9UPN7 881 aa27.51■■□□□ 1.99
VDR-205ENST00000548664 A2ML1A8K2U0 1454 aa27.51■■□□□ 1.99
VDR-205ENST00000548664 MTUS2Q5JR59 1369 aa27.5■■□□□ 1.99
VDR-205ENST00000548664 MBD5Q9P267 1494 aa27.5■■□□□ 1.99
VDR-205ENST00000548664 EHBP1L1Q8N3D4 1523 aa27.46■■□□□ 1.99
VDR-205ENST00000548664 ZNF644Q9H582 1327 aaPredicted RBP27.46■■□□□ 1.99
VDR-205ENST00000548664 RTEL1-TNFRSF6BF6WH68 1400 aa27.46■■□□□ 1.99
VDR-205ENST00000548664 NEURL4Q96JN8 1562 aa27.45■■□□□ 1.99
VDR-205ENST00000548664 DHX29Q7Z478 1369 aaKnown RBP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms