RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 ROCK1Q13464 1354 aa30.55■■■□□ 2.48
RITA1-201ENST00000548278 CDC42BPAQ5VT25 1732 aa30.54■■■□□ 2.48
RITA1-201ENST00000548278 DIEXFQ68CQ4 756 aaKnown RBP30.53■■■□□ 2.48
RITA1-201ENST00000548278 ABCC2Q92887 1545 aa30.53■■■□□ 2.48
RITA1-201ENST00000548278 KDM6BO15054 1643 aa30.49■■■□□ 2.47
RITA1-201ENST00000548278 SIN3AQ96ST3 1273 aa30.49■■■□□ 2.47
RITA1-201ENST00000548278 ZNF777Q9ULD5 760 aaPredicted RBP30.43■■■□□ 2.46
RITA1-201ENST00000548278 NEUROD1Q13562 356 aa30.41■■■□□ 2.46
RITA1-201ENST00000548278 TIMELESSQ9UNS1 1208 aa30.41■■■□□ 2.46
RITA1-201ENST00000548278 UHRF1BP1LA0JNW5 1464 aa30.41■■■□□ 2.46
RITA1-201ENST00000548278 CROCC2H7BZ55 1655 aa30.41■■■□□ 2.46
RITA1-201ENST00000548278 ADGBQ8N7X0 1667 aa30.38■■■□□ 2.45
RITA1-201ENST00000548278 ADGRL2O95490 1459 aa30.35■■■□□ 2.45
RITA1-201ENST00000548278 PREX2Q70Z35 1606 aa30.34■■■□□ 2.45
RITA1-201ENST00000548278 DENND4BO75064 1496 aaPredicted RBP30.34■■■□□ 2.45
RITA1-201ENST00000548278 NCOA1Q15788 1441 aa30.34■■■□□ 2.45
RITA1-201ENST00000548278 ACIN1Q9UKV3 1341 aaKnown RBP30.33■■■□□ 2.45
RITA1-201ENST00000548278 CDC42BPBQ9Y5S2 1711 aa30.32■■■□□ 2.45
RITA1-201ENST00000548278 TRIM52Q96A61 297 aa30.32■■■□□ 2.44
RITA1-201ENST00000548278 KDM5BQ9UGL1 1544 aa30.32■■■□□ 2.44
RITA1-201ENST00000548278 ZCCHC11Q5TAX3 1644 aaKnown RBP30.32■■■□□ 2.44
RITA1-201ENST00000548278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.29■■■□□ 2.44
RITA1-201ENST00000548278 TTC37Q6PGP7 1564 aa30.29■■■□□ 2.44
RITA1-201ENST00000548278 SHANK2Q9UPX8 1470 aa30.29■■■□□ 2.44
RITA1-201ENST00000548278 ARHGEF5Q12774 1597 aa30.26■■■□□ 2.43
RITA1-201ENST00000548278 MPHOSPH9Q99550 1183 aa30.26■■■□□ 2.43
RITA1-201ENST00000548278 SAMD9LQ8IVG5 1584 aa30.25■■■□□ 2.43
RITA1-201ENST00000548278 ANKRD30AQ9BXX3 1397 aa30.25■■■□□ 2.43
RITA1-201ENST00000548278 MBD5Q9P267 1494 aa30.23■■■□□ 2.43
RITA1-201ENST00000548278 C9orf84Q5VXU9 1444 aa30.22■■■□□ 2.43
RITA1-201ENST00000548278 PPP1R15AO75807 674 aaPredicted RBP30.21■■■□□ 2.43
RITA1-201ENST00000548278 TONSLQ96HA7 1378 aa30.2■■■□□ 2.42
RITA1-201ENST00000548278 MYO5CQ9NQX4 1742 aa30.19■■■□□ 2.42
RITA1-201ENST00000548278 HNRNPMP52272 730 aaKnown RBP eCLIP30.18■■■□□ 2.42
RITA1-201ENST00000548278 OSCARQ8IYS5 282 aa30.18■■■□□ 2.42
RITA1-201ENST00000548278 ARHGAP5Q13017 1502 aa30.17■■■□□ 2.42
RITA1-201ENST00000548278 KCNH8Q96L42 1107 aa30.15■■■□□ 2.42
RITA1-201ENST00000548278 TSPY4P0CV99 314 aa30.15■■■□□ 2.42
RITA1-201ENST00000548278 TSPY10P0CW01 314 aa30.15■■■□□ 2.42
RITA1-201ENST00000548278 CCDC141Q6ZP82 1450 aa30.14■■■□□ 2.42
RITA1-201ENST00000548278 ANKRD50Q9ULJ7 1429 aa30.13■■■□□ 2.41
RITA1-201ENST00000548278 RSPH4AQ5TD94 716 aa30.12■■■□□ 2.41
RITA1-201ENST00000548278 PZPP20742 1482 aa30.11■■■□□ 2.41
RITA1-201ENST00000548278 SYCP2Q9BX26 1530 aa30.09■■■□□ 2.41
RITA1-201ENST00000548278 PLCH2O75038 1416 aa30.08■■■□□ 2.41
RITA1-201ENST00000548278 ANKRD30BQ9BXX2 1392 aa30.08■■■□□ 2.41
RITA1-201ENST00000548278 KIAA1107Q9UPP5 1409 aa30.07■■■□□ 2.4
RITA1-201ENST00000548278 SLC4A1APQ9BWU0 796 aaKnown RBP30.07■■■□□ 2.4
RITA1-201ENST00000548278 PLEKHH2Q8IVE3 1493 aa30.07■■■□□ 2.4
RITA1-201ENST00000548278 FOXD1Q16676 465 aa30.07■■■□□ 2.4
RITA1-201ENST00000548278 KIF15Q9NS87 1388 aa30.04■■■□□ 2.4
RITA1-201ENST00000548278 MAST1Q9Y2H9 1570 aa30.03■■■□□ 2.4
RITA1-201ENST00000548278 WDR7Q9Y4E6 1490 aa30.02■■■□□ 2.4
RITA1-201ENST00000548278 MIER1Q8N108 512 aa29.99■■■□□ 2.39
RITA1-201ENST00000548278 ARHGEF12Q9NZN5 1544 aa29.98■■■□□ 2.39
RITA1-201ENST00000548278 EFCAB2Q5VUJ9 269 aa29.98■■■□□ 2.39
RITA1-201ENST00000548278 RPRD2Q5VT52 1461 aaKnown RBP29.97■■■□□ 2.39
RITA1-201ENST00000548278 ARAP3Q8WWN8 1544 aa29.97■■■□□ 2.39
RITA1-201ENST00000548278 KDM5DQ9BY66 1539 aa29.96■■■□□ 2.39
RITA1-201ENST00000548278 ABCC1P33527 1531 aa29.93■■■□□ 2.38
RITA1-201ENST00000548278 NUP155O75694 1391 aa29.91■■■□□ 2.38
RITA1-201ENST00000548278 PLXNC1O60486 1568 aa29.91■■■□□ 2.38
RITA1-201ENST00000548278 ASXL2Q76L83 1435 aa29.89■■■□□ 2.38
RITA1-201ENST00000548278 ABCA9Q8IUA7 1624 aa29.89■■■□□ 2.38
RITA1-201ENST00000548278 PKD2Q13563 968 aa29.88■■■□□ 2.37
RITA1-201ENST00000548278 L3MBTL2Q969R5 705 aa29.88■■■□□ 2.37
RITA1-201ENST00000548278 TEX14Q8IWB6 1497 aa29.86■■■□□ 2.37
RITA1-201ENST00000548278 TRAPPC8Q9Y2L5 1435 aa29.83■■■□□ 2.37
RITA1-201ENST00000548278 DUOX2Q9NRD8 1548 aa29.79■■■□□ 2.36
RITA1-201ENST00000548278 UNC13BO14795 1591 aa29.79■■■□□ 2.36
RITA1-201ENST00000548278 FAM135AQ9P2D6 1515 aa29.77■■■□□ 2.36
RITA1-201ENST00000548278 FANCAO15360 1455 aa29.77■■■□□ 2.36
RITA1-201ENST00000548278 NPM1P06748 294 aaKnown RBP eCLIP29.76■■■□□ 2.36
RITA1-201ENST00000548278 HIRIP3Q9BW71 556 aaPredicted RBP29.76■■■□□ 2.36
RITA1-201ENST00000548278 ERBINQ96RT1 1412 aa29.73■■■□□ 2.35
RITA1-201ENST00000548278 RTEL1-TNFRSF6BF6WH68 1400 aa29.72■■■□□ 2.35
RITA1-201ENST00000548278 AFAP1Q8N556 730 aa29.7■■■□□ 2.34
RITA1-201ENST00000548278 ZFYVE16Q7Z3T8 1539 aa29.69■■■□□ 2.34
RITA1-201ENST00000548278 SPAG9O60271 1321 aaKnown RBP29.69■■■□□ 2.34
RITA1-201ENST00000548278 NBPF8Q3BBV2 869 aa29.68■■■□□ 2.34
RITA1-201ENST00000548278 MAGI2Q86UL8 1455 aa29.67■■■□□ 2.34
RITA1-201ENST00000548278 IQGAP3Q86VI3 1631 aa29.67■■■□□ 2.34
RITA1-201ENST00000548278 DDX10Q13206 875 aaKnown RBP29.65■■■□□ 2.34
RITA1-201ENST00000548278 ADGRL1O94910 1474 aa29.65■■■□□ 2.34
RITA1-201ENST00000548278 SCAPERQ9BY12 1400 aa29.62■■■□□ 2.33
RITA1-201ENST00000548278 INO80Q9ULG1 1556 aaPredicted RBP29.62■■■□□ 2.33
RITA1-201ENST00000548278 HSPA5P11021 654 aaKnown RBP29.6■■■□□ 2.33
RITA1-201ENST00000548278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.6■■■□□ 2.33
RITA1-201ENST00000548278 ATP7AQ04656 1500 aa29.59■■■□□ 2.33
RITA1-201ENST00000548278 CENPBP07199 599 aaPredicted RBP29.59■■■□□ 2.33
RITA1-201ENST00000548278 EIF4G2P78344 907 aaKnown RBP eCLIP29.59■■■□□ 2.33
RITA1-201ENST00000548278 CD109Q6YHK3 1445 aa29.56■■■□□ 2.32
RITA1-201ENST00000548278 PLA2R1Q13018 1463 aa29.54■■■□□ 2.32
RITA1-201ENST00000548278 YTHDC1Q96MU7 727 aaKnown RBP29.53■■■□□ 2.32
RITA1-201ENST00000548278 CFAP74Q9C0B2 1584 aa29.52■■■□□ 2.32
RITA1-201ENST00000548278 UHRF1BP1Q6BDS2 1440 aa29.51■■■□□ 2.31
RITA1-201ENST00000548278 DEPDC5O75140 1603 aa29.49■■■□□ 2.31
RITA1-201ENST00000548278 CCDC144AA2RUR9 1427 aa29.48■■■□□ 2.31
RITA1-201ENST00000548278 SPATA31E1Q6ZUB1 1445 aa29.48■■■□□ 2.31
RITA1-201ENST00000548278 ATP10AO60312 1499 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms