RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
CCDC59-203ENST00000548126 FAM205CA6NFA0 338 aa14.22□□□□□ -0.13
CCDC59-203ENST00000548126 RNF25Q96BH1 459 aaPredicted RBP14.22□□□□□ -0.13
CCDC59-203ENST00000548126 DCAF1Q9Y4B6 1507 aa14.21□□□□□ -0.13
CCDC59-203ENST00000548126 HS3ST6Q96QI5 342 aa14.21□□□□□ -0.13
CCDC59-203ENST00000548126 SPNS2Q8IVW8 549 aa14.2□□□□□ -0.14
CCDC59-203ENST00000548126 MICALL2Q8IY33 904 aa14.19□□□□□ -0.14
CCDC59-203ENST00000548126 HOXB3P14651 431 aaPredicted RBP14.18□□□□□ -0.14
CCDC59-203ENST00000548126 MMRN1Q13201 1228 aa14.17□□□□□ -0.14
CCDC59-203ENST00000548126 HOXB1P14653 301 aaPredicted RBP14.16□□□□□ -0.14
CCDC59-203ENST00000548126 NLRP6P59044 892 aa14.14□□□□□ -0.15
CCDC59-203ENST00000548126 PHF8Q9UPP1 1060 aa14.14□□□□□ -0.15
CCDC59-203ENST00000548126 ZCCHC6Q5VYS8 1495 aaKnown RBP14.13□□□□□ -0.15
CCDC59-203ENST00000548126 ZSWIM6Q9HCJ5 1215 aa14.12□□□□□ -0.15
CCDC59-203ENST00000548126 BCL11BQ9C0K0 894 aaPredicted RBP14.11□□□□□ -0.15
CCDC59-203ENST00000548126 ERBB3P21860 1342 aa14.11□□□□□ -0.15
CCDC59-203ENST00000548126 MS4A4AQ96JQ5 239 aa14.09□□□□□ -0.15
CCDC59-203ENST00000548126 STK24Q9Y6E0 443 aa14.09□□□□□ -0.15
CCDC59-203ENST00000548126 ECM2O94769 699 aaPredicted RBP14.07□□□□□ -0.16
CCDC59-203ENST00000548126 POTEB3A0JP26 581 aa14.06□□□□□ -0.16
CCDC59-203ENST00000548126 POTEBQ6S5H4 581 aa14.06□□□□□ -0.16
CCDC59-203ENST00000548126 KRTAP3-3Q9BYR6 98 aa14.05□□□□□ -0.16
CCDC59-203ENST00000548126 KRTAP3-2Q9BYR7 98 aa14.05□□□□□ -0.16
CCDC59-203ENST00000548126 STK25O00506 426 aa14.04□□□□□ -0.16
CCDC59-203ENST00000548126 TMEM92Q6UXU6 159 aa14.02□□□□□ -0.17
CCDC59-203ENST00000548126 FBXO22Q8NEZ5 403 aa13.98□□□□□ -0.17
CCDC59-203ENST00000548126 VARS2Q5ST30 1063 aaKnown RBP13.97□□□□□ -0.17
CCDC59-203ENST00000548126 NCAPD3P42695 1498 aa13.96□□□□□ -0.17
CCDC59-203ENST00000548126 MFRPQ9BY79 579 aa13.94□□□□□ -0.18
CCDC59-203ENST00000548126 GPR153Q6NV75 609 aa13.93□□□□□ -0.18
CCDC59-203ENST00000548126 NESP48681 1621 aa13.93□□□□□ -0.18
CCDC59-203ENST00000548126 ZNF687Q8N1G0 1237 aa13.9□□□□□ -0.18
CCDC59-203ENST00000548126 THOC2Q8NI27 1593 aaKnown RBP13.89□□□□□ -0.19
CCDC59-203ENST00000548126 PKD2Q13563 968 aa13.87□□□□□ -0.19
CCDC59-203ENST00000548126 RGL2O15211 777 aa13.86□□□□□ -0.19
CCDC59-203ENST00000548126 ARSIQ5FYB1 569 aa13.86□□□□□ -0.19
CCDC59-203ENST00000548126 TMC2Q8TDI7 906 aa13.83□□□□□ -0.2
CCDC59-203ENST00000548126 PTGER2P43116 358 aa13.82□□□□□ -0.2
CCDC59-203ENST00000548126 C2orf72A6NCS6 295 aa13.81□□□□□ -0.2
CCDC59-203ENST00000548126 ZNF316A6NFI3 1004 aaPredicted RBP13.81□□□□□ -0.2
CCDC59-203ENST00000548126 ATAD2BQ9ULI0 1458 aa13.8□□□□□ -0.2
CCDC59-203ENST00000548126 KIF3CO14782 793 aa13.8□□□□□ -0.2
CCDC59-203ENST00000548126 RNF166Q96A37 237 aaPredicted RBP13.8□□□□□ -0.2
CCDC59-203ENST00000548126 MYT1LQ9UL68 1186 aa13.77□□□□□ -0.21
CCDC59-203ENST00000548126 SLC34A2O95436 690 aa13.75□□□□□ -0.21
CCDC59-203ENST00000548126 SMARCA2P51531 1590 aa13.75□□□□□ -0.21
CCDC59-203ENST00000548126 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
CCDC59-203ENST00000548126 LAMC3Q9Y6N6 1575 aa13.72□□□□□ -0.21
CCDC59-203ENST00000548126 KHSRPQ92945 711 aaKnown RBP eCLIP13.72□□□□□ -0.21
CCDC59-203ENST00000548126 PBX2P40425 430 aa13.71□□□□□ -0.21
CCDC59-203ENST00000548126 KIF21AQ7Z4S6 1674 aa13.71□□□□□ -0.21
CCDC59-203ENST00000548126 NUDT7P0C024 238 aa13.7□□□□□ -0.22
CCDC59-203ENST00000548126 ANKRD13DQ6ZTN6 518 aa13.7□□□□□ -0.22
CCDC59-203ENST00000548126 PCDHGA4Q9Y5G9 962 aa13.7□□□□□ -0.22
CCDC59-203ENST00000548126 PDS5BQ9NTI5 1447 aa13.7□□□□□ -0.22
CCDC59-203ENST00000548126 BAZ1AQ9NRL2 1556 aaPredicted RBP13.67□□□□□ -0.22
CCDC59-203ENST00000548126 PSDA5PKW4 1024 aaPredicted RBP13.66□□□□□ -0.22
CCDC59-203ENST00000548126 LSM11P83369 360 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCDC59-203ENST00000548126 HS6ST3Q8IZP7 471 aa13.66□□□□□ -0.22
CCDC59-203ENST00000548126 PPP1R37O75864 691 aa13.64□□□□□ -0.23
CCDC59-203ENST00000548126 LHX6Q9UPM6 363 aa13.63□□□□□ -0.23
CCDC59-203ENST00000548126 BAZ1BQ9UIG0 1483 aaKnown RBP13.61□□□□□ -0.23
CCDC59-203ENST00000548126 RYDENQ9NUL5 291 aaKnown RBP13.61□□□□□ -0.23
CCDC59-203ENST00000548126 SMARCA4P51532 1647 aa13.59□□□□□ -0.23
CCDC59-203ENST00000548126 MRC2Q9UBG0 1479 aa13.58□□□□□ -0.24
CCDC59-203ENST00000548126 TBC1D12O60347 775 aa13.57□□□□□ -0.24
CCDC59-203ENST00000548126 CHGAP10645 457 aaKnown RBP13.57□□□□□ -0.24
CCDC59-203ENST00000548126 FOXK1P85037 733 aa13.57□□□□□ -0.24
CCDC59-203ENST00000548126 RIMBP3CA6NJZ7 1639 aa13.57□□□□□ -0.24
CCDC59-203ENST00000548126 RIMBP3BA6NNM3 1639 aa13.57□□□□□ -0.24
CCDC59-203ENST00000548126 RIMBP3Q9UFD9 1639 aa13.57□□□□□ -0.24
CCDC59-203ENST00000548126 WDR62O43379 1518 aa13.56□□□□□ -0.24
CCDC59-203ENST00000548126 PTCD2Q8WV60 388 aaKnown RBP13.56□□□□□ -0.24
CCDC59-203ENST00000548126 GPHNQ9NQX3 736 aaPredicted RBP13.56□□□□□ -0.24
CCDC59-203ENST00000548126 PLPP6Q8IY26 295 aa13.53□□□□□ -0.24
CCDC59-203ENST00000548126 ARHGAP33O14559 1287 aa13.52□□□□□ -0.25
CCDC59-203ENST00000548126 CADPSQ9ULU8 1353 aa13.5□□□□□ -0.25
CCDC59-203ENST00000548126 AXIN2Q9Y2T1 843 aa13.5□□□□□ -0.25
CCDC59-203ENST00000548126 KCNH8Q96L42 1107 aa13.48□□□□□ -0.25
CCDC59-203ENST00000548126 PEG3Q9GZU2 1588 aa13.47□□□□□ -0.25
CCDC59-203ENST00000548126 PPP4R3BQ5MIZ7 849 aa13.47□□□□□ -0.25
CCDC59-203ENST00000548126 CYB5RLQ6IPT4 315 aa13.46□□□□□ -0.25
CCDC59-203ENST00000548126 ARHGEF11O15085 1522 aa13.45□□□□□ -0.26
CCDC59-203ENST00000548126 DSG2Q14126 1118 aa13.45□□□□□ -0.26
CCDC59-203ENST00000548126 ADGRD1Q6QNK2 874 aa13.44□□□□□ -0.26
CCDC59-203ENST00000548126 POTEEQ6S8J3 1075 aa13.44□□□□□ -0.26
CCDC59-203ENST00000548126 KDM4FA0A1W2PPD8 638 aa13.43□□□□□ -0.26
CCDC59-203ENST00000548126 TK2O00142 265 aa13.43□□□□□ -0.26
CCDC59-203ENST00000548126 HCSTQ9UBK5 93 aa13.42□□□□□ -0.26
CCDC59-203ENST00000548126 STAC3Q96MF2 364 aa13.41□□□□□ -0.26
CCDC59-203ENST00000548126 CEP164Q9UPV0 1460 aa13.39□□□□□ -0.27
CCDC59-203ENST00000548126 NKX1-1Q15270 411 aaPredicted RBP13.35□□□□□ -0.27
CCDC59-203ENST00000548126 PDE4AP27815 886 aa13.34□□□□□ -0.27
CCDC59-203ENST00000548126 PSEN2P49810 448 aa13.33□□□□□ -0.28
CCDC59-203ENST00000548126 PPP1R15BQ5SWA1 713 aa13.33□□□□□ -0.28
CCDC59-203ENST00000548126 OXER1Q8TDS5 423 aa13.33□□□□□ -0.28
CCDC59-203ENST00000548126 CRISPLD2Q9H0B8 497 aa13.33□□□□□ -0.28
CCDC59-203ENST00000548126 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.28
CCDC59-203ENST00000548126 DMRTA1Q5VZB9 504 aa13.31□□□□□ -0.28
CCDC59-203ENST00000548126 UPF1Q92900 1129 aaKnown RBP eCLIP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms