RNA–Protein interactions for RNA: ENST00000547615.1

PTCH1-214, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-214ENST00000547615 CDK11AQ9UQ88 783 aaPredicted RBP13.82□□□□□ -0.2
PTCH1-214ENST00000547615 ATP10AO60312 1499 aa13.81□□□□□ -0.2
PTCH1-214ENST00000547615 ZNF518AQ6AHZ1 1483 aa13.81□□□□□ -0.2
PTCH1-214ENST00000547615 FMN1Q68DA7 1419 aa13.81□□□□□ -0.2
PTCH1-214ENST00000547615 SCAPERQ9BY12 1400 aa13.8□□□□□ -0.2
PTCH1-214ENST00000547615 YEATS2Q9ULM3 1422 aa13.8□□□□□ -0.2
PTCH1-214ENST00000547615 KIF14Q15058 1648 aa13.79□□□□□ -0.2
PTCH1-214ENST00000547615 REREQ9P2R6 1566 aa13.79□□□□□ -0.2
PTCH1-214ENST00000547615 UHRF1BP1Q6BDS2 1440 aa13.78□□□□□ -0.2
PTCH1-214ENST00000547615 CLIP1P30622 1438 aa13.77□□□□□ -0.21
PTCH1-214ENST00000547615 HSPA2P54652 639 aa13.77□□□□□ -0.21
PTCH1-214ENST00000547615 EFCAB2Q5VUJ9 269 aa13.77□□□□□ -0.21
PTCH1-214ENST00000547615 SETD1BQ9UPS6 1966 aaKnown RBP13.76□□□□□ -0.21
PTCH1-214ENST00000547615 KDM5CP41229 1560 aa13.76□□□□□ -0.21
PTCH1-214ENST00000547615 SIGLEC1Q9BZZ2 1709 aa13.76□□□□□ -0.21
PTCH1-214ENST00000547615 IQSEC2Q5JU85 1478 aa13.75□□□□□ -0.21
PTCH1-214ENST00000547615 CDK13Q14004 1512 aaKnown RBP13.74□□□□□ -0.21
PTCH1-214ENST00000547615 PTPRTO14522 1441 aa13.73□□□□□ -0.21
PTCH1-214ENST00000547615 MLECQ14165 292 aa13.72□□□□□ -0.21
PTCH1-214ENST00000547615 PLPPR3Q6T4P5 718 aa13.72□□□□□ -0.21
PTCH1-214ENST00000547615 ARHGAP5Q13017 1502 aa13.72□□□□□ -0.21
PTCH1-214ENST00000547615 CNTLNQ9NXG0 1405 aa13.72□□□□□ -0.21
PTCH1-214ENST00000547615 AGLP35573 1532 aa13.71□□□□□ -0.21
PTCH1-214ENST00000547615 ESF1Q9H501 851 aaKnown RBP13.71□□□□□ -0.21
PTCH1-214ENST00000547615 MLH3Q9UHC1 1453 aa13.7□□□□□ -0.22
PTCH1-214ENST00000547615 RANGAP1P46060 587 aaPredicted RBP13.7□□□□□ -0.22
PTCH1-214ENST00000547615 TROQ12816 1431 aaPredicted RBP13.7□□□□□ -0.22
PTCH1-214ENST00000547615 DISP3Q9P2K9 1392 aa13.7□□□□□ -0.22
PTCH1-214ENST00000547615 STRCQ7RTU9 1775 aa13.69□□□□□ -0.22
PTCH1-214ENST00000547615 DIP2CQ9Y2E4 1556 aa13.69□□□□□ -0.22
PTCH1-214ENST00000547615 SPATA31D1Q6ZQQ2 1576 aa13.67□□□□□ -0.22
PTCH1-214ENST00000547615 MYT1LQ9UL68 1186 aa13.67□□□□□ -0.22
PTCH1-214ENST00000547615 C3P01024 1663 aa13.66□□□□□ -0.22
PTCH1-214ENST00000547615 PREX2Q70Z35 1606 aa13.66□□□□□ -0.22
PTCH1-214ENST00000547615 SOCS7O14512 581 aa13.66□□□□□ -0.22
PTCH1-214ENST00000547615 CCDC18Q5T9S5 1454 aa13.66□□□□□ -0.22
PTCH1-214ENST00000547615 MROH2AA6NES4 1674 aa13.66□□□□□ -0.22
PTCH1-214ENST00000547615 TRAPPC8Q9Y2L5 1435 aa13.65□□□□□ -0.22
PTCH1-214ENST00000547615 ABCC1P33527 1531 aa13.64□□□□□ -0.23
PTCH1-214ENST00000547615 ABCA6Q8N139 1617 aa13.64□□□□□ -0.23
PTCH1-214ENST00000547615 ITSN2Q9NZM3 1697 aa13.63□□□□□ -0.23
PTCH1-214ENST00000547615 NPATQ14207 1427 aa13.63□□□□□ -0.23
PTCH1-214ENST00000547615 CDC42BPBQ9Y5S2 1711 aa13.62□□□□□ -0.23
PTCH1-214ENST00000547615 ATP1B4Q9UN42 357 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-214ENST00000547615 ARHGAP35Q9NRY4 1499 aa13.61□□□□□ -0.23
PTCH1-214ENST00000547615 UBTFP17480 764 aaKnown RBP13.6□□□□□ -0.23
PTCH1-214ENST00000547615 NCOA1Q15788 1441 aa13.6□□□□□ -0.23
PTCH1-214ENST00000547615 CEBPAP49715 358 aaPredicted RBP13.59□□□□□ -0.23
PTCH1-214ENST00000547615 AFAP1Q8N556 730 aa13.59□□□□□ -0.23
PTCH1-214ENST00000547615 LTBP4Q8N2S1 1624 aa13.59□□□□□ -0.23
PTCH1-214ENST00000547615 ZNF142P52746 1687 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-214ENST00000547615 PLA2R1Q13018 1463 aa13.57□□□□□ -0.24
PTCH1-214ENST00000547615 KIDINS220Q9ULH0 1771 aa13.57□□□□□ -0.24
PTCH1-214ENST00000547615 PLEKHH2Q8IVE3 1493 aa13.56□□□□□ -0.24
PTCH1-214ENST00000547615 CASKIN1Q8WXD9 1431 aa13.56□□□□□ -0.24
PTCH1-214ENST00000547615 CAMSAP1Q5T5Y3 1602 aa13.55□□□□□ -0.24
PTCH1-214ENST00000547615 LRRIQ1Q96JM4 1722 aa13.55□□□□□ -0.24
PTCH1-214ENST00000547615 CDC42BPAQ5VT25 1732 aa13.54□□□□□ -0.24
PTCH1-214ENST00000547615 SUPT6HQ7KZ85 1726 aaKnown RBP13.54□□□□□ -0.24
PTCH1-214ENST00000547615 PKD2Q13563 968 aa13.54□□□□□ -0.24
PTCH1-214ENST00000547615 FYCO1Q9BQS8 1478 aa13.53□□□□□ -0.24
PTCH1-214ENST00000547615 SAMD9LQ8IVG5 1584 aa13.53□□□□□ -0.24
PTCH1-214ENST00000547615 MYO3AQ8NEV4 1616 aa13.53□□□□□ -0.24
PTCH1-214ENST00000547615 PPP6R1Q9UPN7 881 aa13.52□□□□□ -0.25
PTCH1-214ENST00000547615 PLXNC1O60486 1568 aa13.5□□□□□ -0.25
PTCH1-214ENST00000547615 CEP170BQ9Y4F5 1589 aaPredicted RBP13.5□□□□□ -0.25
PTCH1-214ENST00000547615 ATP7AQ04656 1500 aa13.5□□□□□ -0.25
PTCH1-214ENST00000547615 FAM135AQ9P2D6 1515 aa13.5□□□□□ -0.25
PTCH1-214ENST00000547615 KIAA1107Q9UPP5 1409 aa13.5□□□□□ -0.25
PTCH1-214ENST00000547615 ILDR2Q71H61 639 aa13.5□□□□□ -0.25
PTCH1-214ENST00000547615 ADGBQ8N7X0 1667 aa13.5□□□□□ -0.25
PTCH1-214ENST00000547615 INO80Q9ULG1 1556 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-214ENST00000547615 ZMYM3Q14202 1370 aa13.49□□□□□ -0.25
PTCH1-214ENST00000547615 SPAG9O60271 1321 aaKnown RBP13.49□□□□□ -0.25
PTCH1-214ENST00000547615 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
PTCH1-214ENST00000547615 CLTCQ00610 1675 aaKnown RBP13.48□□□□□ -0.25
PTCH1-214ENST00000547615 TCOF1Q13428 1488 aaKnown RBP13.48□□□□□ -0.25
PTCH1-214ENST00000547615 A2MP01023 1474 aa13.47□□□□□ -0.25
PTCH1-214ENST00000547615 CPS1P31327 1500 aa13.45□□□□□ -0.26
PTCH1-214ENST00000547615 UBAP1LF5GYI3 381 aa13.44□□□□□ -0.26
PTCH1-214ENST00000547615 GPATCH8Q9UKJ3 1502 aaKnown RBP13.44□□□□□ -0.26
PTCH1-214ENST00000547615 A2ML1A8K2U0 1454 aa13.43□□□□□ -0.26
PTCH1-214ENST00000547615 POLR1AO95602 1720 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-214ENST00000547615 PTPRKQ15262 1439 aa13.43□□□□□ -0.26
PTCH1-214ENST00000547615 CCNB3Q8WWL7 1395 aa13.42□□□□□ -0.26
PTCH1-214ENST00000547615 CHIC1Q5VXU3 224 aa13.41□□□□□ -0.26
PTCH1-214ENST00000547615 CFDP1Q9UEE9 299 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-214ENST00000547615 ZNF777Q9ULD5 760 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-214ENST00000547615 ZNF335Q9H4Z2 1342 aaPredicted RBP13.4□□□□□ -0.26
PTCH1-214ENST00000547615 RTEL1-TNFRSF6BF6WH68 1400 aa13.4□□□□□ -0.26
PTCH1-214ENST00000547615 TOM1O60784 492 aa13.4□□□□□ -0.26
PTCH1-214ENST00000547615 DNMT1P26358 1616 aaKnown RBP13.39□□□□□ -0.27
PTCH1-214ENST00000547615 EHBP1L1Q8N3D4 1523 aa13.38□□□□□ -0.27
PTCH1-214ENST00000547615 NCKAP5LQ9HCH0 1330 aa13.38□□□□□ -0.27
PTCH1-214ENST00000547615 MTUS2Q5JR59 1369 aa13.37□□□□□ -0.27
PTCH1-214ENST00000547615 KDM5DQ9BY66 1539 aa13.37□□□□□ -0.27
PTCH1-214ENST00000547615 GGT6Q6P531 493 aa13.36□□□□□ -0.27
PTCH1-214ENST00000547615 PZPP20742 1482 aa13.36□□□□□ -0.27
PTCH1-214ENST00000547615 NLRP1Q9C000 1473 aa13.36□□□□□ -0.27
PTCH1-214ENST00000547615 HNRNPMP52272 730 aaKnown RBP eCLIP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms