RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 GPATCH8Q9UKJ3 1502 aaKnown RBP17.32■□□□□ 0.36
CCDC38-202ENST00000546386 ABCC5O15440 1437 aa17.31■□□□□ 0.36
CCDC38-202ENST00000546386 UACAQ9BZF9 1416 aa17.3■□□□□ 0.36
CCDC38-202ENST00000546386 MPHOSPH9Q99550 1183 aa17.29■□□□□ 0.36
CCDC38-202ENST00000546386 ABCA8O94911 1581 aa17.29■□□□□ 0.36
CCDC38-202ENST00000546386 DAPK1P53355 1430 aa17.29■□□□□ 0.36
CCDC38-202ENST00000546386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCDC38-202ENST00000546386 SLC4A1APQ9BWU0 796 aaKnown RBP17.28■□□□□ 0.36
CCDC38-202ENST00000546386 OSCARQ8IYS5 282 aa17.27■□□□□ 0.36
CCDC38-202ENST00000546386 CLSPNQ9HAW4 1339 aa17.26■□□□□ 0.35
CCDC38-202ENST00000546386 CAMSAP2Q08AD1 1489 aa17.26■□□□□ 0.35
CCDC38-202ENST00000546386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCDC38-202ENST00000546386 MIA2Q96PC5 1412 aa17.25■□□□□ 0.35
CCDC38-202ENST00000546386 TSPY4P0CV99 314 aa17.23■□□□□ 0.35
CCDC38-202ENST00000546386 TSPY10P0CW01 314 aa17.23■□□□□ 0.35
CCDC38-202ENST00000546386 TCOF1Q13428 1488 aaKnown RBP17.23■□□□□ 0.35
CCDC38-202ENST00000546386 MYT1LQ9UL68 1186 aa17.23■□□□□ 0.35
CCDC38-202ENST00000546386 ZNF326Q5BKZ1 582 aaKnown RBP17.22■□□□□ 0.35
CCDC38-202ENST00000546386 TONSLQ96HA7 1378 aa17.22■□□□□ 0.35
CCDC38-202ENST00000546386 PPP1R15AO75807 674 aaPredicted RBP17.19■□□□□ 0.34
CCDC38-202ENST00000546386 DDX10Q13206 875 aaKnown RBP17.19■□□□□ 0.34
CCDC38-202ENST00000546386 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
CCDC38-202ENST00000546386 AFAP1Q8N556 730 aa17.18■□□□□ 0.34
CCDC38-202ENST00000546386 DENND4BO75064 1496 aaPredicted RBP17.18■□□□□ 0.34
CCDC38-202ENST00000546386 KCNA4P22459 653 aa17.16■□□□□ 0.34
CCDC38-202ENST00000546386 ABCC10Q5T3U5 1492 aa17.16■□□□□ 0.34
CCDC38-202ENST00000546386 PKD2Q13563 968 aa17.16■□□□□ 0.34
CCDC38-202ENST00000546386 CLASP1Q7Z460 1538 aa17.15■□□□□ 0.34
CCDC38-202ENST00000546386 NCOA1Q15788 1441 aa17.15■□□□□ 0.34
CCDC38-202ENST00000546386 L3MBTL2Q969R5 705 aa17.15■□□□□ 0.34
CCDC38-202ENST00000546386 CNGB1Q14028 1251 aaPredicted RBP17.14■□□□□ 0.33
CCDC38-202ENST00000546386 SHROOM2Q13796 1616 aa17.14■□□□□ 0.33
CCDC38-202ENST00000546386 CDC42BPAQ5VT25 1732 aa17.14■□□□□ 0.33
CCDC38-202ENST00000546386 ARHGAP5Q13017 1502 aa17.13■□□□□ 0.33
CCDC38-202ENST00000546386 TTC37Q6PGP7 1564 aa17.12■□□□□ 0.33
CCDC38-202ENST00000546386 AKNAQ7Z591 1439 aa17.12■□□□□ 0.33
CCDC38-202ENST00000546386 ABCC2Q92887 1545 aa17.11■□□□□ 0.33
CCDC38-202ENST00000546386 DNMT1P26358 1616 aaKnown RBP17.11■□□□□ 0.33
CCDC38-202ENST00000546386 NUP155O75694 1391 aa17.11■□□□□ 0.33
CCDC38-202ENST00000546386 KDM2AQ9Y2K7 1162 aa17.11■□□□□ 0.33
CCDC38-202ENST00000546386 C9orf84Q5VXU9 1444 aa17.1■□□□□ 0.33
CCDC38-202ENST00000546386 ANKRD30AQ9BXX3 1397 aa17.09■□□□□ 0.33
CCDC38-202ENST00000546386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCDC38-202ENST00000546386 ANKRD50Q9ULJ7 1429 aa17.08■□□□□ 0.33
CCDC38-202ENST00000546386 KIF15Q9NS87 1388 aa17.08■□□□□ 0.32
CCDC38-202ENST00000546386 RGL3Q3MIN7 710 aa17.07■□□□□ 0.32
CCDC38-202ENST00000546386 SYCP2Q9BX26 1530 aa17.06■□□□□ 0.32
CCDC38-202ENST00000546386 NPM1P06748 294 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC38-202ENST00000546386 ZCCHC11Q5TAX3 1644 aaKnown RBP17.06■□□□□ 0.32
CCDC38-202ENST00000546386 NBPF8Q3BBV2 869 aa17.05■□□□□ 0.32
CCDC38-202ENST00000546386 CDC42BPBQ9Y5S2 1711 aa17.05■□□□□ 0.32
CCDC38-202ENST00000546386 ROCK1Q13464 1354 aa17.04■□□□□ 0.32
CCDC38-202ENST00000546386 SAMD9LQ8IVG5 1584 aa17.04■□□□□ 0.32
CCDC38-202ENST00000546386 EFCAB2Q5VUJ9 269 aa17.04■□□□□ 0.32
CCDC38-202ENST00000546386 POLR3GLQ9BT43 218 aa17.04■□□□□ 0.32
CCDC38-202ENST00000546386 ITSN2Q9NZM3 1697 aa17.04■□□□□ 0.32
CCDC38-202ENST00000546386 MBD5Q9P267 1494 aa17.03■□□□□ 0.32
CCDC38-202ENST00000546386 ARHGEF12Q9NZN5 1544 aa17.03■□□□□ 0.32
CCDC38-202ENST00000546386 ADCY10Q96PN6 1610 aa17.02■□□□□ 0.32
CCDC38-202ENST00000546386 GCC2Q8IWJ2 1684 aa17.02■□□□□ 0.31
CCDC38-202ENST00000546386 TRAPPC8Q9Y2L5 1435 aa17.01■□□□□ 0.31
CCDC38-202ENST00000546386 ANKRD30BQ9BXX2 1392 aa17■□□□□ 0.31
CCDC38-202ENST00000546386 PZPP20742 1482 aa16.99■□□□□ 0.31
CCDC38-202ENST00000546386 ASXL2Q76L83 1435 aa16.98■□□□□ 0.31
CCDC38-202ENST00000546386 HSPA5P11021 654 aaKnown RBP16.98■□□□□ 0.31
CCDC38-202ENST00000546386 KDM5BQ9UGL1 1544 aa16.98■□□□□ 0.31
CCDC38-202ENST00000546386 CCDC141Q6ZP82 1450 aa16.95■□□□□ 0.3
CCDC38-202ENST00000546386 PLEKHH2Q8IVE3 1493 aa16.95■□□□□ 0.3
CCDC38-202ENST00000546386 RAPGEF3O95398 923 aa16.95■□□□□ 0.3
CCDC38-202ENST00000546386 DCAF11Q8TEB1 546 aa16.95■□□□□ 0.3
CCDC38-202ENST00000546386 SPAG9O60271 1321 aaKnown RBP16.95■□□□□ 0.3
CCDC38-202ENST00000546386 PLCH2O75038 1416 aa16.95■□□□□ 0.3
CCDC38-202ENST00000546386 C11orf95C9JLR9 678 aaPredicted RBP16.94■□□□□ 0.3
CCDC38-202ENST00000546386 PREX2Q70Z35 1606 aa16.93■□□□□ 0.3
CCDC38-202ENST00000546386 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
CCDC38-202ENST00000546386 SCAPERQ9BY12 1400 aa16.92■□□□□ 0.3
CCDC38-202ENST00000546386 WDR7Q9Y4E6 1490 aa16.92■□□□□ 0.3
CCDC38-202ENST00000546386 KIF3BO15066 747 aa16.91■□□□□ 0.3
CCDC38-202ENST00000546386 TIMELESSQ9UNS1 1208 aa16.91■□□□□ 0.3
CCDC38-202ENST00000546386 CROCC2H7BZ55 1655 aa16.89■□□□□ 0.29
CCDC38-202ENST00000546386 MYO5CQ9NQX4 1742 aa16.89■□□□□ 0.29
CCDC38-202ENST00000546386 FANCAO15360 1455 aa16.88■□□□□ 0.29
CCDC38-202ENST00000546386 ADGRL2O95490 1459 aa16.88■□□□□ 0.29
CCDC38-202ENST00000546386 UHRF1BP1LA0JNW5 1464 aa16.88■□□□□ 0.29
CCDC38-202ENST00000546386 KIAA1107Q9UPP5 1409 aa16.87■□□□□ 0.29
CCDC38-202ENST00000546386 GGT6Q6P531 493 aa16.86■□□□□ 0.29
CCDC38-202ENST00000546386 ADGBQ8N7X0 1667 aa16.86■□□□□ 0.29
CCDC38-202ENST00000546386 SENP3-EIF4A1A0A087X0R7 540 aa16.86■□□□□ 0.29
CCDC38-202ENST00000546386 EIF4G2P78344 907 aaKnown RBP eCLIP16.86■□□□□ 0.29
CCDC38-202ENST00000546386 RSPH4AQ5TD94 716 aa16.86■□□□□ 0.29
CCDC38-202ENST00000546386 ACIN1Q9UKV3 1341 aaKnown RBP16.86■□□□□ 0.29
CCDC38-202ENST00000546386 RPRD2Q5VT52 1461 aaKnown RBP16.85■□□□□ 0.29
CCDC38-202ENST00000546386 WASHC2AQ641Q2 1341 aa16.85■□□□□ 0.29
CCDC38-202ENST00000546386 ADGRL1O94910 1474 aa16.82■□□□□ 0.28
CCDC38-202ENST00000546386 FAM69CQ0P6D2 419 aa16.82■□□□□ 0.28
CCDC38-202ENST00000546386 GTF3C3Q9Y5Q9 886 aa16.82■□□□□ 0.28
CCDC38-202ENST00000546386 CD109Q6YHK3 1445 aa16.81■□□□□ 0.28
CCDC38-202ENST00000546386 NBPF1Q3BBV0 1214 aa16.81■□□□□ 0.28
CCDC38-202ENST00000546386 SHANK2Q9UPX8 1470 aa16.8■□□□□ 0.28
CCDC38-202ENST00000546386 CENPBP07199 599 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms