RNA–Protein interactions for RNA: ENST00000546312.5

SLC3A2-223, Transcript of solute carrier family 3 member 2, human

TSL 2

Gene SLC3A2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC3A2-223	ENST00000546312	CDK13	Q14004	1512 aa	Known RBP	13.92	□□□□□ -0.18
SLC3A2-223	ENST00000546312		U3KPZ7	1027 aa	Predicted RBP	13.92	□□□□□ -0.18
SLC3A2-223	ENST00000546312	TSPOAP1	O95153	1857 aa		13.92	□□□□□ -0.18
SLC3A2-223	ENST00000546312	CFAP43	Q8NDM7	1665 aa		13.9	□□□□□ -0.18
SLC3A2-223	ENST00000546312	ATXN8OS	P0DMR3	200 aa		13.89	□□□□□ -0.19
SLC3A2-223	ENST00000546312	MAP3K4	Q9Y6R4	1608 aa		13.88	□□□□□ -0.19
SLC3A2-223	ENST00000546312	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.87	□□□□□ -0.19
SLC3A2-223	ENST00000546312	ABCA9	Q8IUA7	1624 aa		13.86	□□□□□ -0.19
SLC3A2-223	ENST00000546312	TRO	Q12816	1431 aa	Predicted RBP	13.86	□□□□□ -0.19
SLC3A2-223	ENST00000546312	CD109	Q6YHK3	1445 aa		13.86	□□□□□ -0.19
SLC3A2-223	ENST00000546312	TEX14	Q8IWB6	1497 aa		13.84	□□□□□ -0.19
SLC3A2-223	ENST00000546312	MAP3K1	Q13233	1512 aa		13.84	□□□□□ -0.19
SLC3A2-223	ENST00000546312	CCER1	Q8TC90	406 aa	Predicted RBP	13.83	□□□□□ -0.2
SLC3A2-223	ENST00000546312	MTUS2	Q5JR59	1369 aa		13.83	□□□□□ -0.2
SLC3A2-223	ENST00000546312	KIF14	Q15058	1648 aa		13.82	□□□□□ -0.2
SLC3A2-223	ENST00000546312	MAGI3	Q5TCQ9	1506 aa		13.82	□□□□□ -0.2
SLC3A2-223	ENST00000546312	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
SLC3A2-223	ENST00000546312	PPRC1	Q5VV67	1664 aa	Known RBP	13.81	□□□□□ -0.2
SLC3A2-223	ENST00000546312	PHLDB1	Q86UU1	1377 aa		13.81	□□□□□ -0.2
SLC3A2-223	ENST00000546312	TIAM1	Q13009	1591 aa		13.8	□□□□□ -0.2
SLC3A2-223	ENST00000546312	MYO5C	Q9NQX4	1742 aa		13.79	□□□□□ -0.2
SLC3A2-223	ENST00000546312	PLCH2	O75038	1416 aa		13.77	□□□□□ -0.21
SLC3A2-223	ENST00000546312	EFCAB2	Q5VUJ9	269 aa		13.77	□□□□□ -0.21
SLC3A2-223	ENST00000546312	EHBP1L1	Q8N3D4	1523 aa		13.77	□□□□□ -0.21
SLC3A2-223	ENST00000546312	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.76	□□□□□ -0.21
SLC3A2-223	ENST00000546312	CFAP74	Q9C0B2	1584 aa		13.76	□□□□□ -0.21
SLC3A2-223	ENST00000546312	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.76	□□□□□ -0.21
SLC3A2-223	ENST00000546312	TTC37	Q6PGP7	1564 aa		13.75	□□□□□ -0.21
SLC3A2-223	ENST00000546312	ARAP3	Q8WWN8	1544 aa		13.74	□□□□□ -0.21
SLC3A2-223	ENST00000546312	LRRC9	Q6ZRR7	1453 aa		13.74	□□□□□ -0.21
SLC3A2-223	ENST00000546312	NEO1	Q92859	1461 aa		13.74	□□□□□ -0.21
SLC3A2-223	ENST00000546312	CDC42BPB	Q9Y5S2	1711 aa		13.73	□□□□□ -0.21
SLC3A2-223	ENST00000546312	CCNB3	Q8WWL7	1395 aa		13.73	□□□□□ -0.21
SLC3A2-223	ENST00000546312	KDM6B	O15054	1643 aa		13.73	□□□□□ -0.21
SLC3A2-223	ENST00000546312	CDC42BPA	Q5VT25	1732 aa		13.73	□□□□□ -0.21
SLC3A2-223	ENST00000546312	KANK4	Q5T7N3	995 aa	Predicted RBP	13.72	□□□□□ -0.21
SLC3A2-223	ENST00000546312	FANCA	O15360	1455 aa		13.72	□□□□□ -0.21
SLC3A2-223	ENST00000546312	AKNA	Q7Z591	1439 aa		13.71	□□□□□ -0.22
SLC3A2-223	ENST00000546312	ARHGAP5	Q13017	1502 aa		13.7	□□□□□ -0.22
SLC3A2-223	ENST00000546312	CLSPN	Q9HAW4	1339 aa		13.7	□□□□□ -0.22
SLC3A2-223	ENST00000546312	ITSN2	Q9NZM3	1697 aa		13.7	□□□□□ -0.22
SLC3A2-223	ENST00000546312	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.7	□□□□□ -0.22
SLC3A2-223	ENST00000546312	PREX2	Q70Z35	1606 aa		13.7	□□□□□ -0.22
SLC3A2-223	ENST00000546312	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.69	□□□□□ -0.22
SLC3A2-223	ENST00000546312	NCOA2	Q15596	1464 aa		13.68	□□□□□ -0.22
SLC3A2-223	ENST00000546312	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.67	□□□□□ -0.22
SLC3A2-223	ENST00000546312	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.66	□□□□□ -0.22
SLC3A2-223	ENST00000546312	RNF39	Q9H2S5	420 aa		13.65	□□□□□ -0.22
SLC3A2-223	ENST00000546312	DENND4B	O75064	1496 aa	Predicted RBP	13.65	□□□□□ -0.22
SLC3A2-223	ENST00000546312	SCAPER	Q9BY12	1400 aa		13.64	□□□□□ -0.23
SLC3A2-223	ENST00000546312	ADGRL1	O94910	1474 aa		13.64	□□□□□ -0.23
SLC3A2-223	ENST00000546312	PLEKHH2	Q8IVE3	1493 aa		13.64	□□□□□ -0.23
SLC3A2-223	ENST00000546312	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.64	□□□□□ -0.23
SLC3A2-223	ENST00000546312	RAPGEF3	O95398	923 aa		13.62	□□□□□ -0.23
SLC3A2-223	ENST00000546312	RSPH4A	Q5TD94	716 aa		13.62	□□□□□ -0.23
SLC3A2-223	ENST00000546312	RICTOR	Q6R327	1708 aa		13.61	□□□□□ -0.23
SLC3A2-223	ENST00000546312	MIA2	Q96PC5	1412 aa		13.61	□□□□□ -0.23
SLC3A2-223	ENST00000546312	MYOM3	Q5VTT5	1437 aa		13.6	□□□□□ -0.23
SLC3A2-223	ENST00000546312	KIAA1107	Q9UPP5	1409 aa		13.6	□□□□□ -0.23
SLC3A2-223	ENST00000546312	SAMD9L	Q8IVG5	1584 aa		13.59	□□□□□ -0.23
SLC3A2-223	ENST00000546312	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.59	□□□□□ -0.23	1e-20	■□□□□ 11
SLC3A2-223	ENST00000546312	MYT1L	Q9UL68	1186 aa		13.58	□□□□□ -0.24
SLC3A2-223	ENST00000546312	ZNF518A	Q6AHZ1	1483 aa		13.58	□□□□□ -0.24
SLC3A2-223	ENST00000546312	ABCC1	P33527	1531 aa		13.58	□□□□□ -0.24
SLC3A2-223	ENST00000546312	MAGI2	Q86UL8	1455 aa		13.57	□□□□□ -0.24
SLC3A2-223	ENST00000546312	AFAP1	Q8N556	730 aa		13.57	□□□□□ -0.24
SLC3A2-223	ENST00000546312	POGZ	Q7Z3K3	1410 aa		13.56	□□□□□ -0.24
SLC3A2-223	ENST00000546312	RRBP1	Q9P2E9	1410 aa	Known RBP	13.56	□□□□□ -0.24
SLC3A2-223	ENST00000546312	ZNF644	Q9H582	1327 aa	Predicted RBP	13.56	□□□□□ -0.24
SLC3A2-223	ENST00000546312	TSPY4	P0CV99	314 aa		13.55	□□□□□ -0.24
SLC3A2-223	ENST00000546312	TSPY10	P0CW01	314 aa		13.55	□□□□□ -0.24
SLC3A2-223	ENST00000546312	CAMSAP2	Q08AD1	1489 aa		13.55	□□□□□ -0.24
SLC3A2-223	ENST00000546312	ZMYM4	Q5VZL5	1548 aa		13.54	□□□□□ -0.24
SLC3A2-223	ENST00000546312	ARHGEF12	Q9NZN5	1544 aa		13.54	□□□□□ -0.24
SLC3A2-223	ENST00000546312	FRMPD1	Q5SYB0	1578 aa		13.54	□□□□□ -0.24
SLC3A2-223	ENST00000546312	SYCP2	Q9BX26	1530 aa		13.54	□□□□□ -0.24
SLC3A2-223	ENST00000546312	PTPN23	Q9H3S7	1636 aa		13.53	□□□□□ -0.24
SLC3A2-223	ENST00000546312	SPAG9	O60271	1321 aa	Known RBP	13.53	□□□□□ -0.24
SLC3A2-223	ENST00000546312	FGD6	Q6ZV73	1430 aa		13.53	□□□□□ -0.24
SLC3A2-223	ENST00000546312	TRAPPC8	Q9Y2L5	1435 aa		13.53	□□□□□ -0.24
SLC3A2-223	ENST00000546312	C1QBP	Q07021	282 aa	Known RBP	13.52	□□□□□ -0.25
SLC3A2-223	ENST00000546312	MLH3	Q9UHC1	1453 aa		13.52	□□□□□ -0.25
SLC3A2-223	ENST00000546312	KDM5C	P41229	1560 aa		13.52	□□□□□ -0.25
SLC3A2-223	ENST00000546312	ARHGEF5	Q12774	1597 aa		13.51	□□□□□ -0.25
SLC3A2-223	ENST00000546312	MBD5	Q9P267	1494 aa		13.51	□□□□□ -0.25
SLC3A2-223	ENST00000546312	HECW2	Q9P2P5	1572 aa		13.5	□□□□□ -0.25
SLC3A2-223	ENST00000546312	ZFYVE16	Q7Z3T8	1539 aa		13.5	□□□□□ -0.25
SLC3A2-223	ENST00000546312	TCOF1	Q13428	1488 aa	Known RBP	13.49	□□□□□ -0.25
SLC3A2-223	ENST00000546312	FAM50A	Q14320	339 aa	Known RBP	13.49	□□□□□ -0.25
SLC3A2-223	ENST00000546312	ATP10A	O60312	1499 aa		13.48	□□□□□ -0.25
SLC3A2-223	ENST00000546312	CCDC141	Q6ZP82	1450 aa		13.48	□□□□□ -0.25
SLC3A2-223	ENST00000546312	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.48	□□□□□ -0.25
SLC3A2-223	ENST00000546312	KIDINS220	Q9ULH0	1771 aa		13.48	□□□□□ -0.25
SLC3A2-223	ENST00000546312	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
SLC3A2-223	ENST00000546312	CAPN15	O75808	1086 aa		13.48	□□□□□ -0.25
SLC3A2-223	ENST00000546312	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.48	□□□□□ -0.25
SLC3A2-223	ENST00000546312	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.47	□□□□□ -0.25
SLC3A2-223	ENST00000546312	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.47	□□□□□ -0.25
SLC3A2-223	ENST00000546312	ACIN1	Q9UKV3	1341 aa	Known RBP	13.46	□□□□□ -0.25
SLC3A2-223	ENST00000546312	ARHGEF40	Q8TER5	1519 aa		13.46	□□□□□ -0.25

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